RNA–Protein interactions for RNA: ENST00000390462.1

TRAV35-201, Transcript of T cell receptor alpha variable 35, humanhuman

BASIC

Gene TRAV35, Length 330 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV35-201ENST00000390462 HEXAP06865 529 aa6.51□□□□□ -1.37
TRAV35-201ENST00000390462 H2AFB1P0C5Y9 115 aa6.51□□□□□ -1.37
TRAV35-201ENST00000390462 H2AFB2P0C5Z0 115 aa6.51□□□□□ -1.37
TRAV35-201ENST00000390462 PKMP14618 531 aaKnown RBP6.51□□□□□ -1.37
TRAV35-201ENST00000390462 IGFBP2P18065 325 aa6.51□□□□□ -1.37
TRAV35-201ENST00000390462 EPORP19235 508 aa6.51□□□□□ -1.37
TRAV35-201ENST00000390462 AHCYP23526 432 aa6.51□□□□□ -1.37
TRAV35-201ENST00000390462 GPTP24298 496 aa6.51□□□□□ -1.37
TRAV35-201ENST00000390462 IGHMBP2P38935 993 aaKnown RBP6.51□□□□□ -1.37
TRAV35-201ENST00000390462 FASLGP48023 281 aa6.51□□□□□ -1.37
TRAV35-201ENST00000390462 MXI1P50539 228 aa6.51□□□□□ -1.37
TRAV35-201ENST00000390462 HNRNPMP52272 730 aaKnown RBP eCLIP6.51□□□□□ -1.37
TRAV35-201ENST00000390462 GBX2P52951 348 aaPredicted RBP6.51□□□□□ -1.37
TRAV35-201ENST00000390462 NAGLUP54802 743 aa6.51□□□□□ -1.37
TRAV35-201ENST00000390462 TGFB2P61812 414 aa6.51□□□□□ -1.37
TRAV35-201ENST00000390462 BEX3Q00994 111 aa6.51□□□□□ -1.37
TRAV35-201ENST00000390462 GFPT1Q06210 699 aaPredicted RBP6.51□□□□□ -1.37
TRAV35-201ENST00000390462 CXCL9Q07325 125 aa6.51□□□□□ -1.37
TRAV35-201ENST00000390462 ELP6Q0PNE2 266 aa6.51□□□□□ -1.37
TRAV35-201ENST00000390462 GRSF1Q12849 480 aaKnown RBP eCLIP6.51□□□□□ -1.37
TRAV35-201ENST00000390462 RIPK1Q13546 671 aa6.51□□□□□ -1.37
TRAV35-201ENST00000390462 RNPS1Q15287 305 aaKnown RBP6.51□□□□□ -1.37
TRAV35-201ENST00000390462 NAB2Q15742 525 aa6.51□□□□□ -1.37
TRAV35-201ENST00000390462 CBWD6Q4V339 395 aa6.51□□□□□ -1.37
TRAV35-201ENST00000390462 MDH1BQ5I0G3 518 aa6.51□□□□□ -1.37
TRAV35-201ENST00000390462 CBWD3Q5JTY5 395 aa6.51□□□□□ -1.37
TRAV35-201ENST00000390462 TEX35Q5T0J7 233 aa6.51□□□□□ -1.37
TRAV35-201ENST00000390462 AGBL4Q5VU57 503 aa6.51□□□□□ -1.37
TRAV35-201ENST00000390462 TMEM88Q6PEY1 159 aa6.51□□□□□ -1.37
TRAV35-201ENST00000390462 ARMC9Q7Z3E5 817 aa6.51□□□□□ -1.37
TRAV35-201ENST00000390462 GPAT4Q86UL3 456 aa6.51□□□□□ -1.37
TRAV35-201ENST00000390462 AMER2Q8N7J2 671 aa6.51□□□□□ -1.37
TRAV35-201ENST00000390462 RNF169Q8NCN4 708 aa6.51□□□□□ -1.37
TRAV35-201ENST00000390462 C2CD4CQ8TF44 421 aa6.51□□□□□ -1.37
TRAV35-201ENST00000390462 GLMPQ8WWB7 406 aa6.51□□□□□ -1.37
TRAV35-201ENST00000390462 MRPL38Q96DV4 380 aaKnown RBP6.51□□□□□ -1.37
TRAV35-201ENST00000390462 EEF2KMTQ96G04 330 aa6.51□□□□□ -1.37
TRAV35-201ENST00000390462 CLMNQ96JQ2 1002 aa6.51□□□□□ -1.37
TRAV35-201ENST00000390462 DPCDQ9BVM2 203 aaPredicted RBP6.51□□□□□ -1.37
TRAV35-201ENST00000390462 RNF32Q9H0A6 362 aa6.51□□□□□ -1.37
TRAV35-201ENST00000390462 PIH1D3Q9NQM4 214 aaKnown RBP6.51□□□□□ -1.37
TRAV35-201ENST00000390462 INTS13Q9NVM9 706 aa6.51□□□□□ -1.37
TRAV35-201ENST00000390462 VPS18Q9P253 973 aa6.51□□□□□ -1.37
TRAV35-201ENST00000390462 CTTNBP2NLQ9P2B4 639 aa6.51□□□□□ -1.37
TRAV35-201ENST00000390462 SLC25A13Q9UJS0 675 aa6.51□□□□□ -1.37
TRAV35-201ENST00000390462 CAB39Q9Y376 341 aaPredicted RBP6.51□□□□□ -1.37
TRAV35-201ENST00000390462 TMED5Q9Y3A6 229 aa6.51□□□□□ -1.37
TRAV35-201ENST00000390462 STRAPQ9Y3F4 350 aaKnown RBP6.51□□□□□ -1.37
TRAV35-201ENST00000390462 DIP2AQ14689 1571 aa6.51□□□□□ -1.37
TRAV35-201ENST00000390462 ACEP12821 1306 aa6.5□□□□□ -1.37
TRAV35-201ENST00000390462 SLIT1O75093 1534 aa6.5□□□□□ -1.37
TRAV35-201ENST00000390462 AHDC1Q5TGY3 1603 aaPredicted RBP6.5□□□□□ -1.37
TRAV35-201ENST00000390462 NCOA2Q15596 1464 aa6.5□□□□□ -1.37
TRAV35-201ENST00000390462 PLEKHH2Q8IVE3 1493 aa6.5□□□□□ -1.37
TRAV35-201ENST00000390462 ARHGAP23Q9P227 1491 aa6.5□□□□□ -1.37
TRAV35-201ENST00000390462 LNP1A1A4G5 178 aa6.5□□□□□ -1.37
TRAV35-201ENST00000390462 E7ENX8 843 aa6.5□□□□□ -1.37
TRAV35-201ENST00000390462 ANGPT2O15123 496 aa6.5□□□□□ -1.37
TRAV35-201ENST00000390462 RECQL4O94761 1208 aa6.5□□□□□ -1.37
TRAV35-201ENST00000390462 KCNK5O95279 499 aa6.5□□□□□ -1.37
TRAV35-201ENST00000390462 DIRAS3O95661 229 aa6.5□□□□□ -1.37
TRAV35-201ENST00000390462 PTBP3O95758 552 aaKnown RBP6.5□□□□□ -1.37
TRAV35-201ENST00000390462 CYC1P08574 325 aa6.5□□□□□ -1.37
TRAV35-201ENST00000390462 KRT5P13647 590 aa6.5□□□□□ -1.37
TRAV35-201ENST00000390462 NCF1P14598 390 aaPredicted RBP6.5□□□□□ -1.37
TRAV35-201ENST00000390462 ATF2P15336 505 aa6.5□□□□□ -1.37
TRAV35-201ENST00000390462 ITIH1P19827 911 aa6.5□□□□□ -1.37
TRAV35-201ENST00000390462 MYF6P23409 242 aa6.5□□□□□ -1.37
TRAV35-201ENST00000390462 ATP5OP48047 213 aa6.5□□□□□ -1.37
TRAV35-201ENST00000390462 PITPNBP48739 271 aa6.5□□□□□ -1.37
TRAV35-201ENST00000390462 RRADP55042 308 aa6.5□□□□□ -1.37
TRAV35-201ENST00000390462 TAP2Q03519 686 aa6.5□□□□□ -1.37
TRAV35-201ENST00000390462 RUNX1T1Q06455 604 aa6.5□□□□□ -1.37
TRAV35-201ENST00000390462 MZT1Q08AG7 82 aa6.5□□□□□ -1.37
TRAV35-201ENST00000390462 FAM214AQ32MH5 1076 aa6.5□□□□□ -1.37
TRAV35-201ENST00000390462 AARDQ4LEZ3 155 aa6.5□□□□□ -1.37
TRAV35-201ENST00000390462 HS1BP3Q53T59 392 aa6.5□□□□□ -1.37
TRAV35-201ENST00000390462 CXorf66Q5JRM2 361 aaPredicted RBP6.5□□□□□ -1.37
TRAV35-201ENST00000390462 KRT39Q6A163 491 aa6.5□□□□□ -1.37
TRAV35-201ENST00000390462 EFCAB12Q6NXP0 572 aa6.5□□□□□ -1.37
TRAV35-201ENST00000390462 MOB3CQ70IA8 216 aa6.5□□□□□ -1.37
TRAV35-201ENST00000390462 ABI3BPQ7Z7G0 1075 aa6.5□□□□□ -1.37
TRAV35-201ENST00000390462 ADGRE4PQ86SQ3 457 aa6.5□□□□□ -1.37
TRAV35-201ENST00000390462 ZDHHC13Q8IUH4 622 aa6.5□□□□□ -1.37
TRAV35-201ENST00000390462 UNC5CLQ8IV45 518 aa6.5□□□□□ -1.37
TRAV35-201ENST00000390462 TIGD4Q8IY51 512 aa6.5□□□□□ -1.37
TRAV35-201ENST00000390462 GHDCQ8N2G8 530 aa6.5□□□□□ -1.37
TRAV35-201ENST00000390462 KDM8Q8N371 416 aa6.5□□□□□ -1.37
TRAV35-201ENST00000390462 OR52L2PQ8NGH6 319 aa6.5□□□□□ -1.37
TRAV35-201ENST00000390462 OR10S1Q8NGN2 331 aa6.5□□□□□ -1.37
TRAV35-201ENST00000390462 ZNF483Q8TF39 744 aaPredicted RBP6.5□□□□□ -1.37
TRAV35-201ENST00000390462 DNASE1L2Q92874 299 aa6.5□□□□□ -1.37
TRAV35-201ENST00000390462 PABPC5Q96DU9 382 aaKnown RBP6.5□□□□□ -1.37
TRAV35-201ENST00000390462 C5orf30Q96GV9 206 aa6.5□□□□□ -1.37
TRAV35-201ENST00000390462 CEP295NLQ96MC4 621 aa6.5□□□□□ -1.37
TRAV35-201ENST00000390462 PNKPQ96T60 521 aa6.5□□□□□ -1.37
TRAV35-201ENST00000390462 PKP2Q99959 881 aa6.5□□□□□ -1.37
TRAV35-201ENST00000390462 ERP44Q9BS26 406 aa6.5□□□□□ -1.37
TRAV35-201ENST00000390462 ELOVL1Q9BW60 279 aa6.5□□□□□ -1.37
TRAV35-201ENST00000390462 MMP27Q9H306 513 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms