RNA–Protein interactions for RNA: ENST00000383801.6

SEC13-203, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2 BASIC

Gene SEC13, Length 1,479 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-203ENST00000383801 SPO11Q9Y5K1 396 aa13.58□□□□□ -0.24
SEC13-203ENST00000383801 NOTCH4Q99466 2003 aa13.58□□□□□ -0.24
SEC13-203ENST00000383801 NUP210Q8TEM1 1887 aaPredicted RBP13.57□□□□□ -0.24
SEC13-203ENST00000383801 A0A0J9YYE9 177 aa13.57□□□□□ -0.24
SEC13-203ENST00000383801 WASH3PC4AMC7 463 aa13.57□□□□□ -0.24
SEC13-203ENST00000383801 NDUFS3O75489 264 aa13.57□□□□□ -0.24
SEC13-203ENST00000383801 TRBC1P01850 177 aa13.57□□□□□ -0.24
SEC13-203ENST00000383801 ASLP04424 464 aa13.57□□□□□ -0.24
SEC13-203ENST00000383801 SRCP12931 536 aa13.57□□□□□ -0.24
SEC13-203ENST00000383801 ALOX15P16050 662 aaPredicted RBP13.57□□□□□ -0.24
SEC13-203ENST00000383801 FDXRP22570 491 aa13.57□□□□□ -0.24
SEC13-203ENST00000383801 NNMTP40261 264 aa13.57□□□□□ -0.24
SEC13-203ENST00000383801 POLR2LP62875 67 aaKnown RBP13.57□□□□□ -0.24
SEC13-203ENST00000383801 ECT2LQ008S8 904 aa13.57□□□□□ -0.24
SEC13-203ENST00000383801 IRF9Q00978 393 aa13.57□□□□□ -0.24
SEC13-203ENST00000383801 GALNT1Q10472 559 aaPredicted RBP13.57□□□□□ -0.24
SEC13-203ENST00000383801 TBCCQ15814 346 aa13.57□□□□□ -0.24
SEC13-203ENST00000383801 SLC22A9Q8IVM8 553 aa13.57□□□□□ -0.24
SEC13-203ENST00000383801 ARID3BQ8IVW6 561 aaPredicted RBP13.57□□□□□ -0.24
SEC13-203ENST00000383801 MFSD6LQ8IWD5 586 aa13.57□□□□□ -0.24
SEC13-203ENST00000383801 ACVR1CQ8NER5 493 aa13.57□□□□□ -0.24
SEC13-203ENST00000383801 HCAR2Q8TDS4 363 aa13.57□□□□□ -0.24
SEC13-203ENST00000383801 WFIKKN2Q8TEU8 576 aa13.57□□□□□ -0.24
SEC13-203ENST00000383801 ECHDC3Q96DC8 303 aa13.57□□□□□ -0.24
SEC13-203ENST00000383801 LRIG1Q96JA1 1093 aa13.57□□□□□ -0.24
SEC13-203ENST00000383801 AARSD1Q9BTE6 412 aaKnown RBP13.57□□□□□ -0.24
SEC13-203ENST00000383801 DRC3Q9H069 523 aa13.57□□□□□ -0.24
SEC13-203ENST00000383801 CCDC68Q9H2F9 335 aa13.57□□□□□ -0.24
SEC13-203ENST00000383801 TLE6Q9H808 572 aa13.57□□□□□ -0.24
SEC13-203ENST00000383801 SFXN1Q9H9B4 322 aa13.57□□□□□ -0.24
SEC13-203ENST00000383801 ZNF358Q9NW07 568 aa13.57□□□□□ -0.24
SEC13-203ENST00000383801 PLK2Q9NYY3 685 aa13.57□□□□□ -0.24
SEC13-203ENST00000383801 APOBEC2Q9Y235 224 aaKnown RBP13.57□□□□□ -0.24
SEC13-203ENST00000383801 KCTD3Q9Y597 815 aa13.57□□□□□ -0.24
SEC13-203ENST00000383801 A0A0G2JND7 137 aa13.56□□□□□ -0.24
SEC13-203ENST00000383801 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.56□□□□□ -0.24
SEC13-203ENST00000383801 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.56□□□□□ -0.24
SEC13-203ENST00000383801 F8W8V4 182 aa13.56□□□□□ -0.24
SEC13-203ENST00000383801 PHGDHO43175 533 aaKnown RBP13.56□□□□□ -0.24
SEC13-203ENST00000383801 SMAD6O43541 496 aaKnown RBP13.56□□□□□ -0.24
SEC13-203ENST00000383801 NPHS1O60500 1241 aa13.56□□□□□ -0.24
SEC13-203ENST00000383801 ZNF821O75541 412 aaPredicted RBP13.56□□□□□ -0.24
SEC13-203ENST00000383801 UBOX5O94941 541 aa13.56□□□□□ -0.24
SEC13-203ENST00000383801 UNC5CO95185 931 aa13.56□□□□□ -0.24
SEC13-203ENST00000383801 TOP3BO95985 862 aaKnown RBP13.56□□□□□ -0.24
SEC13-203ENST00000383801 PYGLP06737 847 aa13.56□□□□□ -0.24
SEC13-203ENST00000383801 SRPRAP08240 638 aaKnown RBP13.56□□□□□ -0.24
SEC13-203ENST00000383801 TYRP14679 529 aa13.56□□□□□ -0.24
SEC13-203ENST00000383801 SAT1P21673 171 aa13.56□□□□□ -0.24
SEC13-203ENST00000383801 ATP5F1P24539 256 aaPredicted RBP13.56□□□□□ -0.24
SEC13-203ENST00000383801 PTGER3P43115 390 aa13.56□□□□□ -0.24
SEC13-203ENST00000383801 IRX4P78413 519 aa13.56□□□□□ -0.24
SEC13-203ENST00000383801 CACNG1Q06432 222 aa13.56□□□□□ -0.24
SEC13-203ENST00000383801 ITGA9Q13797 1035 aa13.56□□□□□ -0.24
SEC13-203ENST00000383801 MYLK3Q32MK0 819 aa13.56□□□□□ -0.24
SEC13-203ENST00000383801 CARD16Q5EG05 197 aa13.56□□□□□ -0.24
SEC13-203ENST00000383801 UGT3A1Q6NUS8 523 aa13.56□□□□□ -0.24
SEC13-203ENST00000383801 PIWIL4Q7Z3Z4 852 aaKnown RBP13.56□□□□□ -0.24
SEC13-203ENST00000383801 RHEBL1Q8TAI7 183 aa13.56□□□□□ -0.24
SEC13-203ENST00000383801 KCTD4Q8WVF5 259 aa13.56□□□□□ -0.24
SEC13-203ENST00000383801 SMG7Q92540 1137 aaKnown RBP13.56□□□□□ -0.24
SEC13-203ENST00000383801 NXNL1Q96CM4 212 aa13.56□□□□□ -0.24
SEC13-203ENST00000383801 SCYL1Q96KG9 808 aa13.56□□□□□ -0.24
SEC13-203ENST00000383801 CNDP1Q96KN2 507 aa13.56□□□□□ -0.24
SEC13-203ENST00000383801 TMEM120AQ9BXJ8 343 aa13.56□□□□□ -0.24
SEC13-203ENST00000383801 GPR63Q9BZJ6 419 aa13.56□□□□□ -0.24
SEC13-203ENST00000383801 ILKAPQ9H0C8 392 aaPredicted RBP13.56□□□□□ -0.24
SEC13-203ENST00000383801 ZFYVE1Q9HBF4 777 aa13.56□□□□□ -0.24
SEC13-203ENST00000383801 TAS2R13Q9NYV9 303 aa13.56□□□□□ -0.24
SEC13-203ENST00000383801 NCKIPSDQ9NZQ3 722 aa13.56□□□□□ -0.24
SEC13-203ENST00000383801 CLEC4EQ9ULY5 219 aa13.56□□□□□ -0.24
SEC13-203ENST00000383801 ZNF711Q9Y462 761 aa13.56□□□□□ -0.24
SEC13-203ENST00000383801 NEDD8-MDP1E9PL57 170 aa13.55□□□□□ -0.24
SEC13-203ENST00000383801 NRG2O14511 850 aaPredicted RBP13.55□□□□□ -0.24
SEC13-203ENST00000383801 POLR2EP19388 210 aaKnown RBP13.55□□□□□ -0.24
SEC13-203ENST00000383801 SLC8A1P32418 973 aa13.55□□□□□ -0.24
SEC13-203ENST00000383801 ABL2P42684 1182 aa13.55□□□□□ -0.24
SEC13-203ENST00000383801 OVGP1Q12889 678 aa13.55□□□□□ -0.24
SEC13-203ENST00000383801 KCNC3Q14003 757 aa13.55□□□□□ -0.24
SEC13-203ENST00000383801 KRT72Q14CN4 511 aa13.55□□□□□ -0.24
SEC13-203ENST00000383801 RAB30Q15771 203 aa13.55□□□□□ -0.24
SEC13-203ENST00000383801 SMAD1Q15797 465 aaKnown RBP13.55□□□□□ -0.24
SEC13-203ENST00000383801 GPR33Q49SQ1 333 aa13.55□□□□□ -0.24
SEC13-203ENST00000383801 RBM20Q5T481 1227 aaKnown RBP13.55□□□□□ -0.24
SEC13-203ENST00000383801 C22orf39Q6P5X5 142 aa13.55□□□□□ -0.24
SEC13-203ENST00000383801 TMEM184AQ6ZMB5 413 aa13.55□□□□□ -0.24
SEC13-203ENST00000383801 TNS4Q8IZW8 715 aa13.55□□□□□ -0.24
SEC13-203ENST00000383801 KDM1BQ8NB78 822 aa13.55□□□□□ -0.24
SEC13-203ENST00000383801 RFWD2Q8NHY2 731 aa13.55□□□□□ -0.24
SEC13-203ENST00000383801 DTX3LQ8TDB6 740 aa13.55□□□□□ -0.24
SEC13-203ENST00000383801 HEXDCQ8WVB3 486 aa13.55□□□□□ -0.24
SEC13-203ENST00000383801 OSCP1Q8WVF1 389 aa13.55□□□□□ -0.24
SEC13-203ENST00000383801 LPGAT1Q92604 370 aa13.55□□□□□ -0.24
SEC13-203ENST00000383801 SKA1Q96BD8 255 aa13.55□□□□□ -0.24
SEC13-203ENST00000383801 SCRN2Q96FV2 425 aa13.55□□□□□ -0.24
SEC13-203ENST00000383801 OLFM1Q99784 485 aa13.55□□□□□ -0.24
SEC13-203ENST00000383801 SMG9Q9H0W8 520 aaKnown RBP13.55□□□□□ -0.24
SEC13-203ENST00000383801 SUV39H2Q9H5I1 410 aa13.55□□□□□ -0.24
SEC13-203ENST00000383801 SUDS3Q9H7L9 328 aaPredicted RBP13.55□□□□□ -0.24
SEC13-203ENST00000383801 TRPV4Q9HBA0 871 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms