RNA–Protein interactions for RNA: ENST00000381272.5

SMC6-202, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 5

Gene SMC6, Length 1,803 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-202ENST00000381272 APOC2P02655 101 aa3.81□□□□□ -1.8
SMC6-202ENST00000381272 S100BP04271 92 aaPredicted RBP3.81□□□□□ -1.8
SMC6-202ENST00000381272 STAG3L1P0CL83 205 aa3.81□□□□□ -1.8
SMC6-202ENST00000381272 NEFHP12036 1026 aa3.81□□□□□ -1.8
SMC6-202ENST00000381272 GPD1P21695 349 aa3.81□□□□□ -1.8
SMC6-202ENST00000381272 BGNP21810 368 aa3.81□□□□□ -1.8
SMC6-202ENST00000381272 PROZP22891 400 aa3.81□□□□□ -1.8
SMC6-202ENST00000381272 EDNRBP24530 442 aa3.81□□□□□ -1.8
SMC6-202ENST00000381272 PTGS2P35354 604 aa3.81□□□□□ -1.8
SMC6-202ENST00000381272 SKIV2L2P42285 1042 aaKnown RBP3.81□□□□□ -1.8
SMC6-202ENST00000381272 GPD2P43304 727 aa3.81□□□□□ -1.8
SMC6-202ENST00000381272 NDST1P52848 882 aa3.81□□□□□ -1.8
SMC6-202ENST00000381272 SLC18A1P54219 525 aa3.81□□□□□ -1.8
SMC6-202ENST00000381272 SLC25A3Q00325 362 aa3.81□□□□□ -1.8
SMC6-202ENST00000381272 ROR1Q01973 937 aa3.81□□□□□ -1.8
SMC6-202ENST00000381272 MBTD1Q05BQ5 628 aa3.81□□□□□ -1.8
SMC6-202ENST00000381272 FAPQ12884 760 aa3.81□□□□□ -1.8
SMC6-202ENST00000381272 VGLL4Q14135 290 aa3.81□□□□□ -1.8
SMC6-202ENST00000381272 KRT81Q14533 505 aa3.81□□□□□ -1.8
SMC6-202ENST00000381272 MXD4Q14582 209 aaPredicted RBP3.81□□□□□ -1.8
SMC6-202ENST00000381272 CPEB4Q17RY0 729 aaKnown RBP eCLIP3.81□□□□□ -1.8
SMC6-202ENST00000381272 PARP6Q2NL67 630 aa3.81□□□□□ -1.8
SMC6-202ENST00000381272 KLHL38Q2WGJ6 581 aa3.81□□□□□ -1.8
SMC6-202ENST00000381272 KBTBD12Q3ZCT8 623 aa3.81□□□□□ -1.8
SMC6-202ENST00000381272 CELF3Q5SZQ8 465 aaKnown RBP3.81□□□□□ -1.8
SMC6-202ENST00000381272 GJC2Q5T442 439 aaPredicted RBP3.81□□□□□ -1.8
SMC6-202ENST00000381272 WDR78Q5VTH9 848 aa3.81□□□□□ -1.8
SMC6-202ENST00000381272 RFWD3Q6PCD5 774 aa3.81□□□□□ -1.8
SMC6-202ENST00000381272 METTL7BQ6UX53 244 aa3.81□□□□□ -1.8
SMC6-202ENST00000381272 FAM183BPQ6ZVS7 135 aa3.81□□□□□ -1.8
SMC6-202ENST00000381272 CYP4V2Q6ZWL3 525 aaPredicted RBP3.81□□□□□ -1.8
SMC6-202ENST00000381272 DOK3Q7L591 496 aa3.81□□□□□ -1.8
SMC6-202ENST00000381272 NLRP9Q7RTR0 991 aa3.81□□□□□ -1.8
SMC6-202ENST00000381272 RPAINQ86UA6 219 aa3.81□□□□□ -1.8
SMC6-202ENST00000381272 APOBEC3FQ8IUX4 373 aaKnown RBP3.81□□□□□ -1.8
SMC6-202ENST00000381272 FBXO16Q8IX29 292 aaPredicted RBP3.81□□□□□ -1.8
SMC6-202ENST00000381272 PDIK1LQ8N165 341 aa3.81□□□□□ -1.8
SMC6-202ENST00000381272 C12orf29Q8N999 325 aa3.81□□□□□ -1.8
SMC6-202ENST00000381272 DDX55Q8NHQ9 600 aaKnown RBP eCLIP3.81□□□□□ -1.8
SMC6-202ENST00000381272 SLC25A43Q8WUT9 341 aaPredicted RBP3.81□□□□□ -1.8
SMC6-202ENST00000381272 NEU4Q8WWR8 484 aaPredicted RBP3.81□□□□□ -1.8
SMC6-202ENST00000381272 FAF2Q96CS3 445 aa3.81□□□□□ -1.8
SMC6-202ENST00000381272 CLIP3Q96DZ5 547 aa3.81□□□□□ -1.8
SMC6-202ENST00000381272 MCRS1Q96EZ8 462 aa3.81□□□□□ -1.8
SMC6-202ENST00000381272 RSRC1Q96IZ7 334 aaKnown RBP3.81□□□□□ -1.8
SMC6-202ENST00000381272 PIWIL1Q96J94 861 aaKnown RBP3.81□□□□□ -1.8
SMC6-202ENST00000381272 FAM167AQ96KS9 214 aa3.81□□□□□ -1.8
SMC6-202ENST00000381272 SPATA33Q96N06 139 aa3.81□□□□□ -1.8
SMC6-202ENST00000381272 FAM111AQ96PZ2 611 aa3.81□□□□□ -1.8
SMC6-202ENST00000381272 LBHD1Q9BQE6 289 aaPredicted RBP3.81□□□□□ -1.8
SMC6-202ENST00000381272 TBC1D10AQ9BXI6 508 aa3.81□□□□□ -1.8
SMC6-202ENST00000381272 MAGEB5Q9BZ81 275 aa3.81□□□□□ -1.8
SMC6-202ENST00000381272 SPATC1LQ9H0A9 340 aa3.81□□□□□ -1.8
SMC6-202ENST00000381272 C2orf40Q9H1Z8 148 aa3.81□□□□□ -1.8
SMC6-202ENST00000381272 CXCL16Q9H2A7 254 aa3.81□□□□□ -1.8
SMC6-202ENST00000381272 LRMDAQ9H2I8 198 aa3.81□□□□□ -1.8
SMC6-202ENST00000381272 FZD8Q9H461 694 aa3.81□□□□□ -1.8
SMC6-202ENST00000381272 RNPEPQ9H4A4 650 aa3.81□□□□□ -1.8
SMC6-202ENST00000381272 MANSC1Q9H8J5 431 aa3.81□□□□□ -1.8
SMC6-202ENST00000381272 PDGFCQ9NRA1 345 aa3.81□□□□□ -1.8
SMC6-202ENST00000381272 STAU2Q9NUL3 570 aaKnown RBP eCLIP3.81□□□□□ -1.8
SMC6-202ENST00000381272 ARL8BQ9NVJ2 186 aa3.81□□□□□ -1.8
SMC6-202ENST00000381272 ASNSD1Q9NWL6 643 aa3.81□□□□□ -1.8
SMC6-202ENST00000381272 HEY2Q9UBP5 337 aa3.81□□□□□ -1.8
SMC6-202ENST00000381272 DPP7Q9UHL4 492 aa3.81□□□□□ -1.8
SMC6-202ENST00000381272 EDARQ9UNE0 448 aa3.81□□□□□ -1.8
SMC6-202ENST00000381272 CLCA2Q9UQC9 943 aa3.81□□□□□ -1.8
SMC6-202ENST00000381272 HEY1Q9Y5J3 304 aa3.81□□□□□ -1.8
SMC6-202ENST00000381272 ZNF638Q14966 1978 aaKnown RBP3.8□□□□□ -1.8
SMC6-202ENST00000381272 A0A087WZ62 844 aa3.8□□□□□ -1.8
SMC6-202ENST00000381272 IQANK1A0A1B0GTG1 560 aa3.8□□□□□ -1.8
SMC6-202ENST00000381272 TCRBV9S1A1TA0A576 114 aa3.8□□□□□ -1.8
SMC6-202ENST00000381272 CXorf49A8MYA2 514 aaPredicted RBP3.8□□□□□ -1.8
SMC6-202ENST00000381272 E5RJQ4 531 aa3.8□□□□□ -1.8
SMC6-202ENST00000381272 F5H423 210 aaPredicted RBP3.8□□□□□ -1.8
SMC6-202ENST00000381272 NDC80O14777 642 aa3.8□□□□□ -1.8
SMC6-202ENST00000381272 KCNN4O15554 427 aa3.8□□□□□ -1.8
SMC6-202ENST00000381272 PRPSAP2O60256 369 aa3.8□□□□□ -1.8
SMC6-202ENST00000381272 UGT1A9O60656 530 aa3.8□□□□□ -1.8
SMC6-202ENST00000381272 PEX11AO75192 247 aa3.8□□□□□ -1.8
SMC6-202ENST00000381272 TMEM127O75204 238 aa3.8□□□□□ -1.8
SMC6-202ENST00000381272 ENTPD5O75356 428 aa3.8□□□□□ -1.8
SMC6-202ENST00000381272 SKAP2O75563 359 aaPredicted RBP3.8□□□□□ -1.8
SMC6-202ENST00000381272 IL18RAPO95256 599 aa3.8□□□□□ -1.8
SMC6-202ENST00000381272 GASTP01350 101 aa3.8□□□□□ -1.8
SMC6-202ENST00000381272 VTNP04004 478 aa3.8□□□□□ -1.8
SMC6-202ENST00000381272 INHBAP08476 426 aa3.8□□□□□ -1.8
SMC6-202ENST00000381272 TROVE2P10155 538 aaKnown RBP eCLIP3.8□□□□□ -1.8
SMC6-202ENST00000381272 TXNP10599 105 aaKnown RBP3.8□□□□□ -1.8
SMC6-202ENST00000381272 VDRP11473 427 aa3.8□□□□□ -1.8
SMC6-202ENST00000381272 PDGFRAP16234 1089 aa3.8□□□□□ -1.8
SMC6-202ENST00000381272 GM2AP17900 193 aa3.8□□□□□ -1.8
SMC6-202ENST00000381272 GNAZP19086 355 aa3.8□□□□□ -1.8
SMC6-202ENST00000381272 IL4RP24394 825 aa3.8□□□□□ -1.8
SMC6-202ENST00000381272 CTSSP25774 331 aa3.8□□□□□ -1.8
SMC6-202ENST00000381272 RBL1P28749 1068 aa3.8□□□□□ -1.8
SMC6-202ENST00000381272 SERPINB3P29508 390 aa3.8□□□□□ -1.8
SMC6-202ENST00000381272 BRCA1P38398 1863 aaKnown RBP3.8□□□□□ -1.8
SMC6-202ENST00000381272 GABRB2P47870 512 aa3.8□□□□□ -1.8
SMC6-202ENST00000381272 NEK3P51956 506 aa3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms