RNA–Protein interactions for RNA: ENST00000381208.9

RPAIN-202, Transcript of RPA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene RPAIN, Length 1,394 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-202ENST00000381208 NUS1Q96E22 293 aa13.01□□□□□ -0.33
RPAIN-202ENST00000381208 SCRN2Q96FV2 425 aa13.01□□□□□ -0.33
RPAIN-202ENST00000381208 WBP1Q96G27 269 aa13.01□□□□□ -0.33
RPAIN-202ENST00000381208 PDXPQ96GD0 296 aa13.01□□□□□ -0.33
RPAIN-202ENST00000381208 COQ10AQ96MF6 247 aa13.01□□□□□ -0.33
RPAIN-202ENST00000381208 PCDH18Q9HCL0 1135 aa13.01□□□□□ -0.33
RPAIN-202ENST00000381208 B4GALT6Q9UBX8 382 aa13.01□□□□□ -0.33
RPAIN-202ENST00000381208 AMACRQ9UHK6 382 aa13.01□□□□□ -0.33
RPAIN-202ENST00000381208 RAI2Q9Y5P3 530 aa13.01□□□□□ -0.33
RPAIN-202ENST00000381208 HEXIM1O94992 359 aaKnown RBP13□□□□□ -0.33
RPAIN-202ENST00000381208 PYGLP06737 847 aa13□□□□□ -0.33
RPAIN-202ENST00000381208 CELA2BP08218 269 aaPredicted RBP13□□□□□ -0.33
RPAIN-202ENST00000381208 ITGA2BP08514 1039 aa13□□□□□ -0.33
RPAIN-202ENST00000381208 MYCLP1P12525 358 aaPredicted RBP13□□□□□ -0.33
RPAIN-202ENST00000381208 CA4P22748 312 aa13□□□□□ -0.33
RPAIN-202ENST00000381208 SKOR1P84550 965 aa13□□□□□ -0.33
RPAIN-202ENST00000381208 SLC25A11Q02978 314 aaKnown RBP13□□□□□ -0.33
RPAIN-202ENST00000381208 C19orf57Q0VDD7 668 aa13□□□□□ -0.33
RPAIN-202ENST00000381208 ARHGEF7Q14155 803 aa13□□□□□ -0.33
RPAIN-202ENST00000381208 CLPPQ16740 277 aaPredicted RBP13□□□□□ -0.33
RPAIN-202ENST00000381208 CCDC122Q5T0U0 273 aa13□□□□□ -0.33
RPAIN-202ENST00000381208 ALKBH5Q6P6C2 394 aaKnown RBP13□□□□□ -0.33
RPAIN-202ENST00000381208 CRTC1Q6UUV9 634 aa13□□□□□ -0.33
RPAIN-202ENST00000381208 CLEC14AQ86T13 490 aa13□□□□□ -0.33
RPAIN-202ENST00000381208 MAP7D3Q8IWC1 876 aa13□□□□□ -0.33
RPAIN-202ENST00000381208 RAVER1Q8IY67 606 aaKnown RBP13□□□□□ -0.33
RPAIN-202ENST00000381208 PLA2G15Q8NCC3 412 aa13□□□□□ -0.33
RPAIN-202ENST00000381208 FAM46DQ8NEK8 389 aa13□□□□□ -0.33
RPAIN-202ENST00000381208 FAM71BQ8TC56 605 aa13□□□□□ -0.33
RPAIN-202ENST00000381208 PDCD6IPQ8WUM4 868 aaKnown RBP13□□□□□ -0.33
RPAIN-202ENST00000381208 OR1E3Q8WZA6 343 aa13□□□□□ -0.33
RPAIN-202ENST00000381208 FATE1Q969F0 183 aa13□□□□□ -0.33
RPAIN-202ENST00000381208 CCDC74AQ96AQ1 378 aa13□□□□□ -0.33
RPAIN-202ENST00000381208 DTD2Q96FN9 168 aa13□□□□□ -0.33
RPAIN-202ENST00000381208 CRELD1Q96HD1 420 aa13□□□□□ -0.33
RPAIN-202ENST00000381208 BBC3Q96PG8 261 aaPredicted RBP13□□□□□ -0.33
RPAIN-202ENST00000381208 NUP85Q9BW27 656 aa13□□□□□ -0.33
RPAIN-202ENST00000381208 THAP2Q9H0W7 228 aa13□□□□□ -0.33
RPAIN-202ENST00000381208 SYNDIG1Q9H7V2 258 aa13□□□□□ -0.33
RPAIN-202ENST00000381208 CBX8Q9HC52 389 aa13□□□□□ -0.33
RPAIN-202ENST00000381208 TRNAU1APQ9NX07 287 aaKnown RBP13□□□□□ -0.33
RPAIN-202ENST00000381208 SIRPGQ9P1W8 387 aa13□□□□□ -0.33
RPAIN-202ENST00000381208 PPIL1Q9Y3C6 166 aa13□□□□□ -0.33
RPAIN-202ENST00000381208 PCDHGC4Q9Y5F7 938 aa13□□□□□ -0.33
RPAIN-202ENST00000381208 LOC400499M0QZD8 3231 aa13□□□□□ -0.33
RPAIN-202ENST00000381208 AHCTF1Q8WYP5 2266 aa12.99□□□□□ -0.33
RPAIN-202ENST00000381208 PRSS38A1L453 326 aa12.99□□□□□ -0.33
RPAIN-202ENST00000381208 TMEM202A6NGA9 273 aa12.99□□□□□ -0.33
RPAIN-202ENST00000381208 CDRT15L2A8MXV6 281 aa12.99□□□□□ -0.33
RPAIN-202ENST00000381208 D6RAR5 112 aa12.99□□□□□ -0.33
RPAIN-202ENST00000381208 ERVH48-1M5A8F1 160 aa12.99□□□□□ -0.33
RPAIN-202ENST00000381208 PLD2O14939 933 aa12.99□□□□□ -0.33
RPAIN-202ENST00000381208 KLK10O43240 276 aa12.99□□□□□ -0.33
RPAIN-202ENST00000381208 NUDT21O43809 227 aaKnown RBP12.99□□□□□ -0.33
RPAIN-202ENST00000381208 PGLSO95336 258 aa12.99□□□□□ -0.33
RPAIN-202ENST00000381208 RPLP0P05388 317 aaKnown RBP12.99□□□□□ -0.33
RPAIN-202ENST00000381208 CCKBRP32239 447 aa12.99□□□□□ -0.33
RPAIN-202ENST00000381208 INHBCP55103 352 aa12.99□□□□□ -0.33
RPAIN-202ENST00000381208 CXADRP78310 365 aa12.99□□□□□ -0.33
RPAIN-202ENST00000381208 ILF3Q12906 894 aaKnown RBP eCLIP12.99□□□□□ -0.332e-6■■□□□ 12.4
RPAIN-202ENST00000381208 PDK2Q15119 407 aa12.99□□□□□ -0.33
RPAIN-202ENST00000381208 NFKBIBQ15653 356 aa12.99□□□□□ -0.33
RPAIN-202ENST00000381208 CNGA3Q16281 694 aa12.99□□□□□ -0.33
RPAIN-202ENST00000381208 C14orf28Q4W4Y0 310 aa12.99□□□□□ -0.33
RPAIN-202ENST00000381208 CERCAMQ5T4B2 595 aa12.99□□□□□ -0.33
RPAIN-202ENST00000381208 NLRP8Q86W28 1048 aa12.99□□□□□ -0.33
RPAIN-202ENST00000381208 CBARPQ8N350 705 aaPredicted RBP12.99□□□□□ -0.33
RPAIN-202ENST00000381208 FBXO39Q8N4B4 442 aa12.99□□□□□ -0.33
RPAIN-202ENST00000381208 TEX26Q8N6G2 289 aa12.99□□□□□ -0.33
RPAIN-202ENST00000381208 SNRNP27Q8WVK2 155 aaKnown RBP12.99□□□□□ -0.33
RPAIN-202ENST00000381208 MCCC1Q96RQ3 725 aaPredicted RBP12.99□□□□□ -0.33
RPAIN-202ENST00000381208 ZNF670Q9BS34 389 aa12.99□□□□□ -0.33
RPAIN-202ENST00000381208 TEX101Q9BY14 249 aa12.99□□□□□ -0.33
RPAIN-202ENST00000381208 GSDMCQ9BYG8 508 aa12.99□□□□□ -0.33
RPAIN-202ENST00000381208 POLR1EQ9GZS1 481 aaKnown RBP12.99□□□□□ -0.33
RPAIN-202ENST00000381208 LRRN3Q9H3W5 708 aa12.99□□□□□ -0.33
RPAIN-202ENST00000381208 NOD2Q9HC29 1040 aa12.99□□□□□ -0.33
RPAIN-202ENST00000381208 CYP4F12Q9HCS2 524 aa12.99□□□□□ -0.33
RPAIN-202ENST00000381208 FGF22Q9HCT0 170 aa12.99□□□□□ -0.33
RPAIN-202ENST00000381208 ETNK2Q9NVF9 386 aa12.99□□□□□ -0.33
RPAIN-202ENST00000381208 WDR70Q9NW82 654 aa12.99□□□□□ -0.33
RPAIN-202ENST00000381208 UVRAGQ9P2Y5 699 aa12.99□□□□□ -0.33
RPAIN-202ENST00000381208 PCDHGA7Q9Y5G6 932 aa12.99□□□□□ -0.33
RPAIN-202ENST00000381208 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.99□□□□□ -0.333e-6■□□□□ 9.2
RPAIN-202ENST00000381208 A0A087X0T9 212 aa12.98□□□□□ -0.33
RPAIN-202ENST00000381208 SYCE3A1L190 88 aa12.98□□□□□ -0.33
RPAIN-202ENST00000381208 TNFSF15O95150 251 aa12.98□□□□□ -0.33
RPAIN-202ENST00000381208 KRT7P08729 469 aa12.98□□□□□ -0.33
RPAIN-202ENST00000381208 FAM228BP0C875 321 aa12.98□□□□□ -0.33
RPAIN-202ENST00000381208 ZNF30P17039 623 aa12.98□□□□□ -0.33
RPAIN-202ENST00000381208 MX2P20592 715 aa12.98□□□□□ -0.33
RPAIN-202ENST00000381208 SSR1P43307 286 aaKnown RBP12.98□□□□□ -0.33
RPAIN-202ENST00000381208 PDX1P52945 283 aa12.98□□□□□ -0.33
RPAIN-202ENST00000381208 DPTQ07507 201 aa12.98□□□□□ -0.33
RPAIN-202ENST00000381208 RAB11FIP2Q7L804 512 aa12.98□□□□□ -0.33
RPAIN-202ENST00000381208 LUZP1Q86V48 1076 aa12.98□□□□□ -0.33
RPAIN-202ENST00000381208 CCNJLQ8IV13 435 aa12.98□□□□□ -0.33
RPAIN-202ENST00000381208 TP53INP2Q8IXH6 220 aa12.98□□□□□ -0.33
RPAIN-202ENST00000381208 ZNF564Q8TBZ8 553 aaPredicted RBP12.98□□□□□ -0.33
RPAIN-202ENST00000381208 GPBAR1Q8TDU6 330 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms