RNA–Protein interactions for RNA: ENST00000380707.8

SMN1-202, Transcript of survival of motor neuron 1, telomeric, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMN1, Length 1,536 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-202ENST00000380707 DOCK9Q9BZ29 2069 aa12.67□□□□□ -0.38
SMN1-202ENST00000380707 TRPM6Q9BX84 2022 aa12.67□□□□□ -0.38
SMN1-202ENST00000380707 SLC31A1O15431 190 aa12.67□□□□□ -0.38
SMN1-202ENST00000380707 LZTS3O60299 673 aaPredicted RBP12.67□□□□□ -0.38
SMN1-202ENST00000380707 TM7SF2O76062 418 aa12.67□□□□□ -0.38
SMN1-202ENST00000380707 SLC4A1P02730 911 aa12.67□□□□□ -0.38
SMN1-202ENST00000380707 C1SP09871 688 aa12.67□□□□□ -0.38
SMN1-202ENST00000380707 ZNF30P17039 623 aa12.67□□□□□ -0.38
SMN1-202ENST00000380707 MAOBP27338 520 aa12.67□□□□□ -0.38
SMN1-202ENST00000380707 ETV3P41162 512 aa12.67□□□□□ -0.38
SMN1-202ENST00000380707 DHPSP49366 369 aaPredicted RBP12.67□□□□□ -0.38
SMN1-202ENST00000380707 STC1P52823 247 aa12.67□□□□□ -0.38
SMN1-202ENST00000380707 ITGA8P53708 1063 aa12.67□□□□□ -0.38
SMN1-202ENST00000380707 PTPN5P54829 565 aa12.67□□□□□ -0.38
SMN1-202ENST00000380707 SGCGQ13326 291 aa12.67□□□□□ -0.38
SMN1-202ENST00000380707 POU6F1Q14863 301 aa12.67□□□□□ -0.38
SMN1-202ENST00000380707 ACOX1Q15067 660 aa12.67□□□□□ -0.38
SMN1-202ENST00000380707 ELF2Q15723 593 aa12.67□□□□□ -0.38
SMN1-202ENST00000380707 LPAL2Q16609 132 aa12.67□□□□□ -0.38
SMN1-202ENST00000380707 HIBCHQ6NVY1 386 aaPredicted RBP12.67□□□□□ -0.38
SMN1-202ENST00000380707 LRRC8BQ6P9F7 803 aa12.67□□□□□ -0.38
SMN1-202ENST00000380707 RFLNAQ6ZTI6 216 aa12.67□□□□□ -0.38
SMN1-202ENST00000380707 GLT6D1Q7Z4J2 308 aa12.67□□□□□ -0.38
SMN1-202ENST00000380707 TMC3Q7Z5M5 1100 aa12.67□□□□□ -0.38
SMN1-202ENST00000380707 PCGF5Q86SE9 256 aa12.67□□□□□ -0.38
SMN1-202ENST00000380707 TTC30BQ8N4P2 665 aa12.67□□□□□ -0.38
SMN1-202ENST00000380707 MCUQ8NE86 351 aa12.67□□□□□ -0.38
SMN1-202ENST00000380707 BRSK1Q8TDC3 778 aa12.67□□□□□ -0.38
SMN1-202ENST00000380707 SNX19Q92543 992 aa12.67□□□□□ -0.38
SMN1-202ENST00000380707 ATOH1Q92858 354 aaPredicted RBP12.67□□□□□ -0.38
SMN1-202ENST00000380707 COQ10AQ96MF6 247 aa12.67□□□□□ -0.38
SMN1-202ENST00000380707 SRPK1Q96SB4 655 aaKnown RBP12.67□□□□□ -0.38
SMN1-202ENST00000380707 GPR63Q9BZJ6 419 aa12.67□□□□□ -0.38
SMN1-202ENST00000380707 KCNH6Q9H252 994 aa12.67□□□□□ -0.38
SMN1-202ENST00000380707 EPC1Q9H2F5 836 aa12.67□□□□□ -0.38
SMN1-202ENST00000380707 TRABDQ9H4I3 376 aa12.67□□□□□ -0.38
SMN1-202ENST00000380707 EIF2B4Q9UI10 523 aaKnown RBP12.67□□□□□ -0.38
SMN1-202ENST00000380707 DMGDHQ9UI17 866 aaKnown RBP12.67□□□□□ -0.38
SMN1-202ENST00000380707 ARL5AQ9Y689 179 aa12.67□□□□□ -0.38
SMN1-202ENST00000380707 THADAQ6YHU6 1953 aa12.66□□□□□ -0.38
SMN1-202ENST00000380707 GPR179Q6PRD1 2367 aa12.66□□□□□ -0.38
SMN1-202ENST00000380707 LRRK1Q38SD2 2015 aa12.66□□□□□ -0.38
SMN1-202ENST00000380707 CEP192Q8TEP8 1941 aa12.66□□□□□ -0.38
SMN1-202ENST00000380707 A0A1W2PPC4 97 aa12.66□□□□□ -0.38
SMN1-202ENST00000380707 ESYT3A0FGR9 886 aa12.66□□□□□ -0.38
SMN1-202ENST00000380707 MEI4A8MW99 385 aa12.66□□□□□ -0.38
SMN1-202ENST00000380707 PSMD11O00231 422 aa12.66□□□□□ -0.38
SMN1-202ENST00000380707 RAD51BO15315 384 aa12.66□□□□□ -0.38
SMN1-202ENST00000380707 BUD23O43709 281 aaKnown RBP12.66□□□□□ -0.38
SMN1-202ENST00000380707 RECQL5O94762 991 aaPredicted RBP12.66□□□□□ -0.38
SMN1-202ENST00000380707 RHOBTB1O94844 696 aa12.66□□□□□ -0.38
SMN1-202ENST00000380707 ITPKAP23677 461 aa12.66□□□□□ -0.38
SMN1-202ENST00000380707 HMGCLP35914 325 aa12.66□□□□□ -0.38
SMN1-202ENST00000380707 SESN2P58004 480 aaPredicted RBP12.66□□□□□ -0.38
SMN1-202ENST00000380707 SARNPP82979 210 aaKnown RBP12.66□□□□□ -0.38
SMN1-202ENST00000380707 CREB5Q02930 508 aa12.66□□□□□ -0.38
SMN1-202ENST00000380707 MORF4L2Q15014 288 aa12.66□□□□□ -0.38
SMN1-202ENST00000380707 CCDC38Q502W7 563 aa12.66□□□□□ -0.38
SMN1-202ENST00000380707 GLE1Q53GS7 698 aaKnown RBP12.66□□□□□ -0.38
SMN1-202ENST00000380707 SETMARQ53H47 684 aaPredicted RBP12.66□□□□□ -0.38
SMN1-202ENST00000380707 Q6ZVL8 140 aa12.66□□□□□ -0.38
SMN1-202ENST00000380707 TECPR1Q7Z6L1 1165 aa12.66□□□□□ -0.38
SMN1-202ENST00000380707 HOOK3Q86VS8 718 aa12.66□□□□□ -0.38
SMN1-202ENST00000380707 DNASE2BQ8WZ79 361 aa12.66□□□□□ -0.38
SMN1-202ENST00000380707 SERPINB12Q96P63 405 aa12.66□□□□□ -0.38
SMN1-202ENST00000380707 KLF6Q99612 283 aaPredicted RBP12.66□□□□□ -0.38
SMN1-202ENST00000380707 RAB17Q9H0T7 212 aa12.66□□□□□ -0.38
SMN1-202ENST00000380707 FZD3Q9NPG1 666 aa12.66□□□□□ -0.38
SMN1-202ENST00000380707 FAM86C1Q9NVL1 165 aa12.66□□□□□ -0.38
SMN1-202ENST00000380707 GRHL1Q9NZI5 618 aa12.66□□□□□ -0.38
SMN1-202ENST00000380707 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.66□□□□□ -0.388e-7■■□□□ 12.7
SMN1-202ENST00000380707 HACD3Q9P035 362 aa12.66□□□□□ -0.38
SMN1-202ENST00000380707 ANAPC5Q9UJX4 755 aa12.66□□□□□ -0.38
SMN1-202ENST00000380707 KCTD3Q9Y597 815 aa12.66□□□□□ -0.38
SMN1-202ENST00000380707 SPAG17Q6Q759 2223 aa12.66□□□□□ -0.38
SMN1-202ENST00000380707 WNT9AO14904 365 aa12.65□□□□□ -0.38
SMN1-202ENST00000380707 LDB2O43679 373 aa12.65□□□□□ -0.38
SMN1-202ENST00000380707 CD27P26842 260 aa12.65□□□□□ -0.38
SMN1-202ENST00000380707 SPINT3P49223 89 aa12.65□□□□□ -0.38
SMN1-202ENST00000380707 CRADDP78560 199 aa12.65□□□□□ -0.38
SMN1-202ENST00000380707 GUCY2DQ02846 1103 aa12.65□□□□□ -0.38
SMN1-202ENST00000380707 PTPRCAPQ14761 206 aa12.65□□□□□ -0.38
SMN1-202ENST00000380707 AGERQ15109 404 aa12.65□□□□□ -0.38
SMN1-202ENST00000380707 TAF1AQ15573 450 aaPredicted RBP12.65□□□□□ -0.38
SMN1-202ENST00000380707 LYSMD4Q5XG99 296 aa12.65□□□□□ -0.38
SMN1-202ENST00000380707 C1orf216Q8TAB5 229 aa12.65□□□□□ -0.38
SMN1-202ENST00000380707 ASB12Q8WXK4 309 aa12.65□□□□□ -0.38
SMN1-202ENST00000380707 SEC14L1Q92503 715 aa12.65□□□□□ -0.38
SMN1-202ENST00000380707 CENPTQ96BT3 561 aa12.65□□□□□ -0.38
SMN1-202ENST00000380707 PWWP2AQ96N64 755 aa12.65□□□□□ -0.38
SMN1-202ENST00000380707 MYOCQ99972 504 aa12.65□□□□□ -0.38
SMN1-202ENST00000380707 IRF2BPLQ9H1B7 796 aa12.65□□□□□ -0.38
SMN1-202ENST00000380707 XAB2Q9HCS7 855 aaKnown RBP12.65□□□□□ -0.38
SMN1-202ENST00000380707 BPIFA1Q9NP55 256 aa12.65□□□□□ -0.38
SMN1-202ENST00000380707 MBNL1Q9NR56 388 aaKnown RBP12.65□□□□□ -0.38
SMN1-202ENST00000380707 TMEM74BQ9NUR3 256 aa12.65□□□□□ -0.38
SMN1-202ENST00000380707 IL17CQ9P0M4 197 aa12.65□□□□□ -0.38
SMN1-202ENST00000380707 WHRNQ9P202 907 aa12.65□□□□□ -0.38
SMN1-202ENST00000380707 CD84Q9UIB8 345 aa12.65□□□□□ -0.38
SMN1-202ENST00000380707 CA5BQ9Y2D0 317 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms