RNA–Protein interactions for RNA: ENST00000379215.8

ECHDC3-201, Transcript of enoyl-CoA hydratase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ECHDC3, Length 1,649 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3-201ENST00000379215 POLD2P49005 469 aa24.57■■□□□ 1.52
ECHDC3-201ENST00000379215 ARSDP51689 593 aa24.57■■□□□ 1.52
ECHDC3-201ENST00000379215 ZDHHC20Q5W0Z9 365 aa24.57■■□□□ 1.52
ECHDC3-201ENST00000379215 TRMT11Q7Z4G4 463 aaKnown RBP24.57■■□□□ 1.52
ECHDC3-201ENST00000379215 SDCCAG8Q86SQ7 713 aaPredicted RBP24.57■■□□□ 1.52
ECHDC3-201ENST00000379215 SFTPA1Q8IWL2 248 aa24.57■■□□□ 1.52
ECHDC3-201ENST00000379215 ZNF366Q8N895 744 aa24.57■■□□□ 1.52
ECHDC3-201ENST00000379215 OR4L1Q8NH43 312 aa24.57■■□□□ 1.52
ECHDC3-201ENST00000379215 CATSPERZQ9NTU4 200 aa24.57■■□□□ 1.52
ECHDC3-201ENST00000379215 FBXO5Q9UKT4 447 aa24.57■■□□□ 1.52
ECHDC3-201ENST00000379215 A6NNZ2 444 aa24.57■■□□□ 1.52
ECHDC3-201ENST00000379215 PFDN6O15212 129 aa24.57■■□□□ 1.52
ECHDC3-201ENST00000379215 GOT2P00505 430 aaKnown RBP24.57■■□□□ 1.52
ECHDC3-201ENST00000379215 SLC4A1P02730 911 aa24.57■■□□□ 1.52
ECHDC3-201ENST00000379215 EPHX1P07099 455 aa24.57■■□□□ 1.52
ECHDC3-201ENST00000379215 HLA-EP13747 358 aa24.57■■□□□ 1.52
ECHDC3-201ENST00000379215 ITGB7P26010 798 aa24.57■■□□□ 1.52
ECHDC3-201ENST00000379215 PTPN5P54829 565 aa24.57■■□□□ 1.52
ECHDC3-201ENST00000379215 TMPRSS15P98073 1019 aa24.57■■□□□ 1.52
ECHDC3-201ENST00000379215 GRSF1Q12849 480 aaKnown RBP eCLIP24.57■■□□□ 1.52
ECHDC3-201ENST00000379215 TUBB8Q3ZCM7 444 aa24.57■■□□□ 1.52
ECHDC3-201ENST00000379215 CHPFQ8IZ52 775 aa24.57■■□□□ 1.52
ECHDC3-201ENST00000379215 STK40Q8N2I9 435 aa24.57■■□□□ 1.52
ECHDC3-201ENST00000379215 ACMSDQ8TDX5 336 aa24.57■■□□□ 1.52
ECHDC3-201ENST00000379215 MTG2Q9H4K7 406 aa24.57■■□□□ 1.52
ECHDC3-201ENST00000379215 SLC17A6Q9P2U8 582 aa24.57■■□□□ 1.52
ECHDC3-201ENST00000379215 PPM1HQ9ULR3 514 aa24.57■■□□□ 1.52
ECHDC3-201ENST00000379215 STON1Q9Y6Q2 735 aa24.57■■□□□ 1.52
ECHDC3-201ENST00000379215 TICRRQ7Z2Z1 1910 aa24.57■■□□□ 1.52
ECHDC3-201ENST00000379215 CCDC162PA2VCL2 907 aa24.56■■□□□ 1.52
ECHDC3-201ENST00000379215 BUD23O43709 281 aaKnown RBP24.56■■□□□ 1.52
ECHDC3-201ENST00000379215 SLC1A2P43004 574 aa24.56■■□□□ 1.52
ECHDC3-201ENST00000379215 CD151P48509 253 aa24.56■■□□□ 1.52
ECHDC3-201ENST00000379215 SLC18A1P54219 525 aa24.56■■□□□ 1.52
ECHDC3-201ENST00000379215 SMAD1Q15797 465 aaKnown RBP24.56■■□□□ 1.52
ECHDC3-201ENST00000379215 CDKN3Q16667 212 aa24.56■■□□□ 1.52
ECHDC3-201ENST00000379215 FASTKD1Q53R41 847 aaKnown RBP24.56■■□□□ 1.52
ECHDC3-201ENST00000379215 TMEM196Q5HYL7 178 aa24.56■■□□□ 1.52
ECHDC3-201ENST00000379215 AARS2Q5JTZ9 985 aaKnown RBP24.56■■□□□ 1.52
ECHDC3-201ENST00000379215 FAM46CQ5VWP2 391 aa24.56■■□□□ 1.52
ECHDC3-201ENST00000379215 SDE2Q6IQ49 451 aa24.56■■□□□ 1.52
ECHDC3-201ENST00000379215 ERAP2Q6P179 960 aa24.56■■□□□ 1.52
ECHDC3-201ENST00000379215 PTAR1Q7Z6K3 402 aaPredicted RBP24.56■■□□□ 1.52
ECHDC3-201ENST00000379215 CILP2Q8IUL8 1156 aa24.56■■□□□ 1.52
ECHDC3-201ENST00000379215 CBARPQ8N350 705 aaPredicted RBP24.56■■□□□ 1.52
ECHDC3-201ENST00000379215 SELENOSQ9BQE4 189 aa24.56■■□□□ 1.52
ECHDC3-201ENST00000379215 SLC2A4RGQ9NR83 387 aa24.56■■□□□ 1.52
ECHDC3-201ENST00000379215 VPS9D1Q9Y2B5 631 aa24.56■■□□□ 1.52
ECHDC3-201ENST00000379215 NPIPB15A6NHN6 443 aaPredicted RBP24.55■■□□□ 1.52
ECHDC3-201ENST00000379215 K7EQS6 105 aa24.55■■□□□ 1.52
ECHDC3-201ENST00000379215 CD3EAPO15446 510 aaKnown RBP24.55■■□□□ 1.52
ECHDC3-201ENST00000379215 SRFP11831 508 aa24.55■■□□□ 1.52
ECHDC3-201ENST00000379215 KRT4P19013 534 aa24.55■■□□□ 1.52
ECHDC3-201ENST00000379215 TDGQ13569 410 aa24.55■■□□□ 1.52
ECHDC3-201ENST00000379215 ARHGEF7Q14155 803 aa24.55■■□□□ 1.52
ECHDC3-201ENST00000379215 MROH9Q5TGP6 573 aa24.55■■□□□ 1.52
ECHDC3-201ENST00000379215 TBRG4Q969Z0 631 aaKnown RBP eCLIP24.55■■□□□ 1.52
ECHDC3-201ENST00000379215 SMIM14Q96QK8 99 aa24.55■■□□□ 1.52
ECHDC3-201ENST00000379215 TCF12Q99081 682 aa24.55■■□□□ 1.52
ECHDC3-201ENST00000379215 MCMBPQ9BTE3 642 aa24.55■■□□□ 1.52
ECHDC3-201ENST00000379215 FBRSQ9HAH7 460 aa24.55■■□□□ 1.52
ECHDC3-201ENST00000379215 FBRSL1Q9HCM7 1045 aaKnown RBP24.55■■□□□ 1.52
ECHDC3-201ENST00000379215 DYRK4Q9NR20 520 aa24.55■■□□□ 1.52
ECHDC3-201ENST00000379215 HEBP1Q9NRV9 189 aa24.55■■□□□ 1.52
ECHDC3-201ENST00000379215 CACNA2D2Q9NY47 1150 aa24.55■■□□□ 1.52
ECHDC3-201ENST00000379215 APPL1Q9UKG1 709 aa24.55■■□□□ 1.52
ECHDC3-201ENST00000379215 CORO1CQ9ULV4 474 aaPredicted RBP24.55■■□□□ 1.52
ECHDC3-201ENST00000379215 COL4A2P08572 1712 aa24.55■■□□□ 1.52
ECHDC3-201ENST00000379215 C16orf96A6NNT2 1141 aa24.54■■□□□ 1.52
ECHDC3-201ENST00000379215 KPNA3O00505 521 aaPredicted RBP24.54■■□□□ 1.52
ECHDC3-201ENST00000379215 PRPF4O43172 522 aaKnown RBP eCLIP24.54■■□□□ 1.52
ECHDC3-201ENST00000379215 VIPR1P32241 457 aa24.54■■□□□ 1.52
ECHDC3-201ENST00000379215 KIR2DL1P43626 348 aaPredicted RBP24.54■■□□□ 1.52
ECHDC3-201ENST00000379215 LEPRP48357 1165 aaKnown RBP24.54■■□□□ 1.52
ECHDC3-201ENST00000379215 SERPINB8P50452 374 aa24.54■■□□□ 1.52
ECHDC3-201ENST00000379215 BMPR2Q13873 1038 aa24.54■■□□□ 1.52
ECHDC3-201ENST00000379215 RNF187Q5TA31 235 aaPredicted RBP24.54■■□□□ 1.52
ECHDC3-201ENST00000379215 TXNDC11Q6PKC3 985 aa24.54■■□□□ 1.52
ECHDC3-201ENST00000379215 CRTC1Q6UUV9 634 aa24.54■■□□□ 1.52
ECHDC3-201ENST00000379215 ZC3HC1Q86WB0 502 aaKnown RBP24.54■■□□□ 1.52
ECHDC3-201ENST00000379215 DENND6AQ8IWF6 608 aa24.54■■□□□ 1.52
ECHDC3-201ENST00000379215 PIP4K2CQ8TBX8 421 aa24.54■■□□□ 1.52
ECHDC3-201ENST00000379215 VPS39Q96JC1 886 aa24.54■■□□□ 1.52
ECHDC3-201ENST00000379215 PRSS16Q9NQE7 514 aa24.54■■□□□ 1.52
ECHDC3-201ENST00000379215 RAD18Q9NS91 495 aa24.54■■□□□ 1.52
ECHDC3-201ENST00000379215 HCN2Q9UL51 889 aa24.54■■□□□ 1.52
ECHDC3-201ENST00000379215 SYNCRIPO60506 623 aaKnown RBP24.53■■□□□ 1.52
ECHDC3-201ENST00000379215 RNASEH1O60930 286 aaKnown RBP24.53■■□□□ 1.52
ECHDC3-201ENST00000379215 CTBP1Q13363 440 aa24.53■■□□□ 1.52
ECHDC3-201ENST00000379215 HABP4Q5JVS0 413 aaKnown RBP24.53■■□□□ 1.52
ECHDC3-201ENST00000379215 LRRC66Q68CR7 880 aa24.53■■□□□ 1.52
ECHDC3-201ENST00000379215 ISL2Q96A47 359 aa24.53■■□□□ 1.52
ECHDC3-201ENST00000379215 PBXIP1Q96AQ6 731 aa24.53■■□□□ 1.52
ECHDC3-201ENST00000379215 CABS1Q96KC9 395 aa24.53■■□□□ 1.52
ECHDC3-201ENST00000379215 INTS10Q9NVR2 710 aaKnown RBP24.53■■□□□ 1.52
ECHDC3-201ENST00000379215 B4GALT6Q9UBX8 382 aa24.53■■□□□ 1.52
ECHDC3-201ENST00000379215 FKBPLQ9UIM3 349 aa24.53■■□□□ 1.52
ECHDC3-201ENST00000379215 A0A1W2PPM1 405 aa24.53■■□□□ 1.52
ECHDC3-201ENST00000379215 FAM47DPA6NHR8 397 aa24.53■■□□□ 1.52
ECHDC3-201ENST00000379215 CLDN7O95471 211 aa24.53■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 76.9 ms