RNA–Protein interactions for RNA: ENST00000378726.1

SSU72-204, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2

Gene SSU72, Length 2,238 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-204ENST00000378726 SLC41A1Q8IVJ1 513 aa19.47■□□□□ 0.71
SSU72-204ENST00000378726 USP13Q92995 863 aaPredicted RBP19.47■□□□□ 0.71
SSU72-204ENST00000378726 HTATIP2Q9BUP3 242 aa19.47■□□□□ 0.71
SSU72-204ENST00000378726 C20orf27Q9GZN8 174 aa19.47■□□□□ 0.71
SSU72-204ENST00000378726 MFSD1Q9H3U5 465 aa19.47■□□□□ 0.71
SSU72-204ENST00000378726 SUDS3Q9H7L9 328 aaPredicted RBP19.47■□□□□ 0.71
SSU72-204ENST00000378726 MARCOQ9UEW3 520 aaPredicted RBP19.47■□□□□ 0.71
SSU72-204ENST00000378726 BPTFQ12830 3046 aa19.47■□□□□ 0.71
SSU72-204ENST00000378726 FAM95CA0A1B0GW59 222 aa19.47■□□□□ 0.71
SSU72-204ENST00000378726 K7ERQ8 282 aa19.47■□□□□ 0.71
SSU72-204ENST00000378726 XYLBO75191 536 aa19.47■□□□□ 0.71
SSU72-204ENST00000378726 PROCP04070 461 aa19.47■□□□□ 0.71
SSU72-204ENST00000378726 HNRNPA1P09651 372 aaKnown RBP eCLIP19.47■□□□□ 0.71
SSU72-204ENST00000378726 POLD2P49005 469 aa19.47■□□□□ 0.71
SSU72-204ENST00000378726 PGGT1BP53609 377 aa19.47■□□□□ 0.71
SSU72-204ENST00000378726 CLEC14AQ86T13 490 aa19.47■□□□□ 0.71
SSU72-204ENST00000378726 RBM23Q86U06 439 aaKnown RBP19.47■□□□□ 0.71
SSU72-204ENST00000378726 KBTBD2Q8IY47 623 aa19.47■□□□□ 0.71
SSU72-204ENST00000378726 PNPLA1Q8N8W4 532 aa19.47■□□□□ 0.71
SSU72-204ENST00000378726 RBM15BQ8NDT2 890 aaKnown RBP19.47■□□□□ 0.71
SSU72-204ENST00000378726 PDCD6IPQ8WUM4 868 aaKnown RBP19.47■□□□□ 0.71
SSU72-204ENST00000378726 PEX13Q92968 403 aa19.47■□□□□ 0.71
SSU72-204ENST00000378726 ACDQ96AP0 544 aa19.47■□□□□ 0.71
SSU72-204ENST00000378726 DNAJC1Q96KC8 554 aaKnown RBP19.47■□□□□ 0.71
SSU72-204ENST00000378726 TDP1Q9NUW8 608 aa19.47■□□□□ 0.71
SSU72-204ENST00000378726 AURKAO14965 403 aa19.46■□□□□ 0.71
SSU72-204ENST00000378726 PHGDHO43175 533 aaKnown RBP19.46■□□□□ 0.71
SSU72-204ENST00000378726 CD70P32970 193 aa19.46■□□□□ 0.71
SSU72-204ENST00000378726 LEPRP48357 1165 aaKnown RBP19.46■□□□□ 0.71
SSU72-204ENST00000378726 CSRP3P50461 194 aa19.46■□□□□ 0.71
SSU72-204ENST00000378726 ACVR1Q04771 509 aa19.46■□□□□ 0.71
SSU72-204ENST00000378726 CCDC153Q494R4 210 aa19.46■□□□□ 0.71
SSU72-204ENST00000378726 CNSTQ6PJW8 725 aa19.46■□□□□ 0.71
SSU72-204ENST00000378726 GRASPQ7Z6J2 395 aaPredicted RBP19.46■□□□□ 0.71
SSU72-204ENST00000378726 TMPRSS6Q8IU80 811 aa19.46■□□□□ 0.71
SSU72-204ENST00000378726 SPDYE1Q8NFV5 336 aaPredicted RBP19.46■□□□□ 0.71
SSU72-204ENST00000378726 RIN3Q8TB24 985 aa19.46■□□□□ 0.71
SSU72-204ENST00000378726 CLPTM1LQ96KA5 538 aa19.46■□□□□ 0.71
SSU72-204ENST00000378726 SPO11Q9Y5K1 396 aa19.46■□□□□ 0.71
SSU72-204ENST00000378726 OR51F1A6NGY5 319 aa19.45■□□□□ 0.7
SSU72-204ENST00000378726 MAGEC1O60732 1142 aa19.45■□□□□ 0.7
SSU72-204ENST00000378726 CRTAMO95727 393 aa19.45■□□□□ 0.7
SSU72-204ENST00000378726 KCNA4P22459 653 aa19.45■□□□□ 0.7
SSU72-204ENST00000378726 ERFP50548 548 aa19.45■□□□□ 0.7
SSU72-204ENST00000378726 AQP5P55064 265 aa19.45■□□□□ 0.7
SSU72-204ENST00000378726 KDSRQ06136 332 aa19.45■□□□□ 0.7
SSU72-204ENST00000378726 GPM6BQ13491 265 aa19.45■□□□□ 0.7
SSU72-204ENST00000378726 ZNF789Q5FWF6 425 aa19.45■□□□□ 0.7
SSU72-204ENST00000378726 CILP2Q8IUL8 1156 aa19.45■□□□□ 0.7
SSU72-204ENST00000378726 MFSD6LQ8IWD5 586 aa19.45■□□□□ 0.7
SSU72-204ENST00000378726 LPCAT1Q8NF37 534 aa19.45■□□□□ 0.7
SSU72-204ENST00000378726 OR13C4Q8NGS5 318 aa19.45■□□□□ 0.7
SSU72-204ENST00000378726 STYXQ8WUJ0 223 aa19.45■□□□□ 0.7
SSU72-204ENST00000378726 ADGRE3Q9BY15 652 aa19.45■□□□□ 0.7
SSU72-204ENST00000378726 PLA2G4CQ9UP65 541 aa19.45■□□□□ 0.7
SSU72-204ENST00000378726 ANKRD66B4E2M5 251 aa19.45■□□□□ 0.7
SSU72-204ENST00000378726 SMAD6O43541 496 aaKnown RBP19.45■□□□□ 0.7
SSU72-204ENST00000378726 TRAF2Q12933 501 aa19.45■□□□□ 0.7
SSU72-204ENST00000378726 ATXN7L2Q5T6C5 722 aaPredicted RBP19.45■□□□□ 0.7
SSU72-204ENST00000378726 THEMIS2Q5TEJ8 643 aa19.45■□□□□ 0.7
SSU72-204ENST00000378726 OR52E8Q6IFG1 317 aa19.45■□□□□ 0.7
SSU72-204ENST00000378726 LDB1Q86U70 411 aaPredicted RBP19.45■□□□□ 0.7
SSU72-204ENST00000378726 TMEM25Q86YD3 366 aa19.45■□□□□ 0.7
SSU72-204ENST00000378726 ARHGAP24Q8N264 748 aa19.45■□□□□ 0.7
SSU72-204ENST00000378726 LEMD2Q8NC56 503 aa19.45■□□□□ 0.7
SSU72-204ENST00000378726 RAB3IL1Q8TBN0 382 aa19.45■□□□□ 0.7
SSU72-204ENST00000378726 ELMO2Q96JJ3 720 aa19.45■□□□□ 0.7
SSU72-204ENST00000378726 SMIM14Q96QK8 99 aa19.45■□□□□ 0.7
SSU72-204ENST00000378726 MAP3K7O43318 606 aa19.44■□□□□ 0.7
SSU72-204ENST00000378726 STMN1P16949 149 aa19.44■□□□□ 0.7
SSU72-204ENST00000378726 RAB10P61026 200 aa19.44■□□□□ 0.7
SSU72-204ENST00000378726 DBN1Q16643 649 aa19.44■□□□□ 0.7
SSU72-204ENST00000378726 PLEKHG6Q3KR16 790 aa19.44■□□□□ 0.7
SSU72-204ENST00000378726 ZCCHC23Q6ZST2 131 aa19.44■□□□□ 0.7
SSU72-204ENST00000378726 CEP97Q8IW35 865 aa19.44■□□□□ 0.7
SSU72-204ENST00000378726 TNS4Q8IZW8 715 aa19.44■□□□□ 0.7
SSU72-204ENST00000378726 PPFIBP2Q8ND30 876 aa19.44■□□□□ 0.7
SSU72-204ENST00000378726 PHC3Q8NDX5 983 aa19.44■□□□□ 0.7
SSU72-204ENST00000378726 MDGA1Q8NFP4 955 aa19.44■□□□□ 0.7
SSU72-204ENST00000378726 PPP1R14CQ8TAE6 165 aa19.44■□□□□ 0.7
SSU72-204ENST00000378726 PIDD1Q9HB75 910 aa19.44■□□□□ 0.7
SSU72-204ENST00000378726 COPG2Q9UBF2 871 aa19.44■□□□□ 0.7
SSU72-204ENST00000378726 INTS6Q9UL03 887 aaKnown RBP19.44■□□□□ 0.7
SSU72-204ENST00000378726 RIMKLBQ9ULI2 386 aa19.44■□□□□ 0.7
SSU72-204ENST00000378726 ANKRD6Q9Y2G4 727 aa19.44■□□□□ 0.7
SSU72-204ENST00000378726 HCFC2Q9Y5Z7 792 aa19.44■□□□□ 0.7
SSU72-204ENST00000378726 CCDC162PA2VCL2 907 aa19.44■□□□□ 0.7
SSU72-204ENST00000378726 SMIM24O75264 130 aa19.44■□□□□ 0.7
SSU72-204ENST00000378726 RPP40O75818 363 aaKnown RBP19.44■□□□□ 0.7
SSU72-204ENST00000378726 GLP2RO95838 553 aa19.44■□□□□ 0.7
SSU72-204ENST00000378726 GOT2P00505 430 aaKnown RBP19.44■□□□□ 0.7
SSU72-204ENST00000378726 SLC35E2BP0CK96 405 aa19.44■□□□□ 0.7
SSU72-204ENST00000378726 ALDH18A1P54886 795 aaKnown RBP19.44■□□□□ 0.7
SSU72-204ENST00000378726 TAS2R39P59534 338 aa19.44■□□□□ 0.7
SSU72-204ENST00000378726 STX3Q13277 289 aa19.44■□□□□ 0.7
SSU72-204ENST00000378726 SLC12A1Q13621 1099 aa19.44■□□□□ 0.7
SSU72-204ENST00000378726 PCLAFQ15004 111 aa19.44■□□□□ 0.7
SSU72-204ENST00000378726 PRSS36Q5K4E3 855 aa19.44■□□□□ 0.7
SSU72-204ENST00000378726 RNF220Q5VTB9 566 aa19.44■□□□□ 0.7
SSU72-204ENST00000378726 PDE12Q6L8Q7 609 aaKnown RBP19.44■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms