RNA–Protein interactions for RNA: ENST00000378536.4

SKI-201, Transcript of SKI proto-oncogene, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SKI, Length 5,613 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKI-201ENST00000378536 OLFM3Q96PB7 478 aa21.22■□□□□ 0.99
SKI-201ENST00000378536 FERD3LQ96RJ6 166 aa21.22■□□□□ 0.99
SKI-201ENST00000378536 EIF4E1BA6NMX2 242 aaKnown RBP21.22■□□□□ 0.99
SKI-201ENST00000378536 ATG13O75143 517 aa21.22■□□□□ 0.99
SKI-201ENST00000378536 GJA1P17302 382 aa21.22■□□□□ 0.99
SKI-201ENST00000378536 TNNI3P19429 210 aa21.22■□□□□ 0.99
SKI-201ENST00000378536 KCNQ1P51787 676 aa21.22■□□□□ 0.99
SKI-201ENST00000378536 BRSK1Q8TDC3 778 aa21.22■□□□□ 0.99
SKI-201ENST00000378536 BBS4Q96RK4 519 aa21.22■□□□□ 0.99
SKI-201ENST00000378536 ZNF180Q9UJW8 692 aa21.22■□□□□ 0.99
SKI-201ENST00000378536 MBLAC1A4D2B0 266 aaPredicted RBP21.22■□□□□ 0.99
SKI-201ENST00000378536 SNX3O60493 162 aa21.22■□□□□ 0.99
SKI-201ENST00000378536 NMBRP28336 390 aa21.22■□□□□ 0.99
SKI-201ENST00000378536 XKR6Q5GH73 641 aa21.22■□□□□ 0.99
SKI-201ENST00000378536 C1orf220Q5T0J3 134 aa21.22■□□□□ 0.99
SKI-201ENST00000378536 ADGRD1Q6QNK2 874 aa21.22■□□□□ 0.99
SKI-201ENST00000378536 C15orf39Q6ZRI6 1047 aa21.22■□□□□ 0.99
SKI-201ENST00000378536 ZNF572Q7Z3I7 529 aaPredicted RBP21.22■□□□□ 0.99
SKI-201ENST00000378536 TMEM132CQ8N3T6 1108 aa21.22■□□□□ 0.99
SKI-201ENST00000378536 AP2M1Q96CW1 435 aa21.22■□□□□ 0.99
SKI-201ENST00000378536 ABCG8Q9H221 673 aa21.22■□□□□ 0.99
SKI-201ENST00000378536 NDOR1Q9UHB4 597 aa21.22■□□□□ 0.99
SKI-201ENST00000378536 SRRM3A6NNA2 597 aaPredicted RBP21.21■□□□□ 0.99
SKI-201ENST00000378536 FFAR3O14843 346 aa21.21■□□□□ 0.99
SKI-201ENST00000378536 GPR42O15529 346 aa21.21■□□□□ 0.99
SKI-201ENST00000378536 ZNF23P17027 643 aa21.21■□□□□ 0.99
SKI-201ENST00000378536 SEC13P55735 322 aa21.21■□□□□ 0.99
SKI-201ENST00000378536 TRMT5Q32P41 509 aaKnown RBP21.21■□□□□ 0.99
SKI-201ENST00000378536 KIAA0408Q6ZU52 694 aa21.21■□□□□ 0.99
SKI-201ENST00000378536 UBE2R2Q712K3 238 aaPredicted RBP21.21■□□□□ 0.99
SKI-201ENST00000378536 VPS33AQ96AX1 596 aa21.21■□□□□ 0.99
SKI-201ENST00000378536 NPY6RQ99463 290 aa21.21■□□□□ 0.99
SKI-201ENST00000378536 SORCS3Q9UPU3 1222 aa21.21■□□□□ 0.99
SKI-201ENST00000378536 ALBP02768 609 aa21.21■□□□□ 0.99
SKI-201ENST00000378536 PABPC1P11940 636 aaKnown RBP21.21■□□□□ 0.99
SKI-201ENST00000378536 HSPA13P48723 471 aa21.21■□□□□ 0.99
SKI-201ENST00000378536 CXCR3P49682 368 aa21.21■□□□□ 0.99
SKI-201ENST00000378536 NEK3P51956 506 aa21.21■□□□□ 0.99
SKI-201ENST00000378536 POF1BQ8WVV4 589 aa21.21■□□□□ 0.99
SKI-201ENST00000378536 GRHL1Q9NZI5 618 aa21.21■□□□□ 0.99
SKI-201ENST00000378536 SLC17A7Q9P2U7 560 aa21.21■□□□□ 0.99
SKI-201ENST00000378536 GRIN2DO15399 1336 aa21.21■□□□□ 0.99
SKI-201ENST00000378536 COX7A2P14406 83 aa21.21■□□□□ 0.99
SKI-201ENST00000378536 TSPAN8P19075 237 aa21.21■□□□□ 0.99
SKI-201ENST00000378536 CDYL2Q8N8U2 506 aa21.21■□□□□ 0.99
SKI-201ENST00000378536 OR14C36Q8NHC7 312 aa21.21■□□□□ 0.99
SKI-201ENST00000378536 HAPLN2Q9GZV7 340 aa21.21■□□□□ 0.99
SKI-201ENST00000378536 H2AFY2Q9P0M6 372 aaPredicted RBP21.21■□□□□ 0.99
SKI-201ENST00000378536 TNRC6CQ9HCJ0 1690 aaKnown RBP21.21■□□□□ 0.99
SKI-201ENST00000378536 DLG2Q15700 870 aa21.21■□□□□ 0.99
SKI-201ENST00000378536 SMYD5Q6GMV2 418 aa21.21■□□□□ 0.99
SKI-201ENST00000378536 ESRP1Q6NXG1 681 aaKnown RBP21.21■□□□□ 0.99
SKI-201ENST00000378536 CYP4Z1Q86W10 505 aa21.21■□□□□ 0.99
SKI-201ENST00000378536 KLHL32Q96NJ5 620 aa21.21■□□□□ 0.99
SKI-201ENST00000378536 IL23AQ9NPF7 189 aa21.21■□□□□ 0.99
SKI-201ENST00000378536 NPEPPSL1A6NEC2 478 aa21.2■□□□□ 0.99
SKI-201ENST00000378536 PEX11AO75192 247 aa21.2■□□□□ 0.99
SKI-201ENST00000378536 CDK14O94921 469 aa21.2■□□□□ 0.99
SKI-201ENST00000378536 WDR47O94967 919 aa21.2■□□□□ 0.99
SKI-201ENST00000378536 MLLT6P55198 1093 aaPredicted RBP21.2■□□□□ 0.99
SKI-201ENST00000378536 ZBTB2Q8N680 514 aa21.2■□□□□ 0.99
SKI-201ENST00000378536 BEND7Q8N7W2 519 aaPredicted RBP21.2■□□□□ 0.99
SKI-201ENST00000378536 PPP3R2Q96LZ3 170 aa21.2■□□□□ 0.99
SKI-201ENST00000378536 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP21.2■□□□□ 0.98
SKI-201ENST00000378536 HPGDP15428 266 aa21.2■□□□□ 0.98
SKI-201ENST00000378536 LIMK2P53671 638 aa21.2■□□□□ 0.98
SKI-201ENST00000378536 MPP1Q00013 466 aa21.2■□□□□ 0.98
SKI-201ENST00000378536 PEX6Q13608 980 aa21.2■□□□□ 0.98
SKI-201ENST00000378536 TAF1AQ15573 450 aaPredicted RBP21.2■□□□□ 0.98
SKI-201ENST00000378536 CELF5Q8N6W0 485 aaKnown RBP21.2■□□□□ 0.98
SKI-201ENST00000378536 CLDND1Q9NY35 253 aa21.2■□□□□ 0.98
SKI-201ENST00000378536 KCNE2Q9Y6J6 123 aa21.2■□□□□ 0.98
SKI-201ENST00000378536 GOT2P00505 430 aaKnown RBP21.2■□□□□ 0.98
SKI-201ENST00000378536 OVCA2Q8WZ82 227 aa21.2■□□□□ 0.98
SKI-201ENST00000378536 INPP5DQ92835 1189 aa21.2■□□□□ 0.98
SKI-201ENST00000378536 DNAJC1Q96KC8 554 aaKnown RBP21.2■□□□□ 0.98
SKI-201ENST00000378536 WRAP53Q9BUR4 548 aaKnown RBP21.2■□□□□ 0.98
SKI-201ENST00000378536 MECRQ9BV79 373 aa21.2■□□□□ 0.98
SKI-201ENST00000378536 MIOSQ9NXC5 875 aa21.2■□□□□ 0.98
SKI-201ENST00000378536 PLLPQ9Y342 182 aa21.2■□□□□ 0.98
SKI-201ENST00000378536 SLC28A1O00337 649 aa21.2■□□□□ 0.98
SKI-201ENST00000378536 CBX6O95503 412 aa21.2■□□□□ 0.98
SKI-201ENST00000378536 SLC12A4Q9UP95 1085 aa21.2■□□□□ 0.98
SKI-201ENST00000378536 SLC27A6Q9Y2P4 619 aa21.2■□□□□ 0.98
SKI-201ENST00000378536 HDAC3O15379 428 aa21.2■□□□□ 0.98
SKI-201ENST00000378536 METTL18O95568 372 aa21.2■□□□□ 0.98
SKI-201ENST00000378536 CD84Q9UIB8 345 aa21.2■□□□□ 0.98
SKI-201ENST00000378536 INPPL1O15357 1258 aa21.19■□□□□ 0.98
SKI-201ENST00000378536 HNRNPLP14866 589 aaKnown RBP eCLIP21.19■□□□□ 0.985e-9■■■□□ 19.2
SKI-201ENST00000378536 LDB1Q86U70 411 aaPredicted RBP21.19■□□□□ 0.98
SKI-201ENST00000378536 PHYKPLQ8IUZ5 450 aa21.19■□□□□ 0.98
SKI-201ENST00000378536 BBS7Q8IWZ6 715 aa21.19■□□□□ 0.98
SKI-201ENST00000378536 FIG4Q92562 907 aa21.19■□□□□ 0.98
SKI-201ENST00000378536 TMEM237Q96Q45 408 aa21.19■□□□□ 0.98
SKI-201ENST00000378536 TMCC3Q9ULS5 477 aa21.19■□□□□ 0.98
SKI-201ENST00000378536 C15orf38-AP3S2A0A0A6YYH1 394 aa21.19■□□□□ 0.98
SKI-201ENST00000378536 BPGMP07738 259 aa21.19■□□□□ 0.98
SKI-201ENST00000378536 RRM2P31350 389 aa21.19■□□□□ 0.98
SKI-201ENST00000378536 SQLEQ14534 574 aa21.19■□□□□ 0.98
SKI-201ENST00000378536 CARD16Q5EG05 197 aa21.19■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms