RNA–Protein interactions for RNA: ENST00000378043.8

BEST1-201, Transcript of bestrophin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BEST1, Length 2,740 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-201ENST00000378043 ARL5AQ9Y689 179 aa10.95□□□□□ -0.66
BEST1-201ENST00000378043 GBF1Q92538 1859 aa10.95□□□□□ -0.66
BEST1-201ENST00000378043 CDK14O94921 469 aa10.94□□□□□ -0.66
BEST1-201ENST00000378043 SIX3O95343 332 aaPredicted RBP10.94□□□□□ -0.66
BEST1-201ENST00000378043 CYBAP13498 195 aa10.94□□□□□ -0.66
BEST1-201ENST00000378043 GPX3P22352 226 aa10.94□□□□□ -0.66
BEST1-201ENST00000378043 FDXRP22570 491 aa10.94□□□□□ -0.66
BEST1-201ENST00000378043 FOXA1P55317 472 aa10.94□□□□□ -0.66
BEST1-201ENST00000378043 HERVK_113P63132 956 aa10.94□□□□□ -0.66
BEST1-201ENST00000378043 NFKB2Q00653 900 aa10.94□□□□□ -0.66
BEST1-201ENST00000378043 ACVR1Q04771 509 aa10.94□□□□□ -0.66
BEST1-201ENST00000378043 EFEMP1Q12805 493 aa10.94□□□□□ -0.66
BEST1-201ENST00000378043 APOFQ13790 326 aa10.94□□□□□ -0.66
BEST1-201ENST00000378043 RBBP5Q15291 538 aaKnown RBP10.94□□□□□ -0.66
BEST1-201ENST00000378043 SLC5A9Q2M3M2 681 aa10.94□□□□□ -0.66
BEST1-201ENST00000378043 NADK2Q4G0N4 442 aa10.94□□□□□ -0.66
BEST1-201ENST00000378043 PITRM1Q5JRX3 1037 aa10.94□□□□□ -0.66
BEST1-201ENST00000378043 FAM45BPQ6NSW5 357 aa10.94□□□□□ -0.66
BEST1-201ENST00000378043 AFAP1L2Q8N4X5 818 aa10.94□□□□□ -0.66
BEST1-201ENST00000378043 KLHDC9Q8NEP7 349 aa10.94□□□□□ -0.66
BEST1-201ENST00000378043 FAM110BQ8TC76 370 aa10.94□□□□□ -0.66
BEST1-201ENST00000378043 FAM45AQ8TCE6 357 aa10.94□□□□□ -0.66
BEST1-201ENST00000378043 NMD3Q96D46 503 aaKnown RBP10.94□□□□□ -0.66
BEST1-201ENST00000378043 C19orf60Q96EN9 201 aa10.94□□□□□ -0.66
BEST1-201ENST00000378043 LRCH3Q96II8 777 aa10.94□□□□□ -0.66
BEST1-201ENST00000378043 PRPF18Q99633 342 aaKnown RBP10.94□□□□□ -0.66
BEST1-201ENST00000378043 SLC25A23Q9BV35 468 aa10.94□□□□□ -0.66
BEST1-201ENST00000378043 ERVK-6Q9BXR3 956 aa10.94□□□□□ -0.66
BEST1-201ENST00000378043 ZCWPW1Q9H0M4 648 aa10.94□□□□□ -0.66
BEST1-201ENST00000378043 RBM38Q9H0Z9 239 aaKnown RBP10.94□□□□□ -0.66
BEST1-201ENST00000378043 AKTIPQ9H8T0 292 aa10.94□□□□□ -0.66
BEST1-201ENST00000378043 MRGBPQ9NV56 204 aa10.94□□□□□ -0.66
BEST1-201ENST00000378043 GIMAP2Q9UG22 337 aa10.94□□□□□ -0.66
BEST1-201ENST00000378043 RNF11Q9Y3C5 154 aa10.94□□□□□ -0.66
BEST1-201ENST00000378043 H3BMM5 538 aa10.94□□□□□ -0.66
BEST1-201ENST00000378043 TNPO2O14787 897 aaKnown RBP10.94□□□□□ -0.66
BEST1-201ENST00000378043 OAZ2O95190 189 aa10.94□□□□□ -0.66
BEST1-201ENST00000378043 TNFAIP8O95379 198 aa10.94□□□□□ -0.66
BEST1-201ENST00000378043 SLC4A1P02730 911 aa10.94□□□□□ -0.66
BEST1-201ENST00000378043 ATP6V1B1P15313 513 aa10.94□□□□□ -0.66
BEST1-201ENST00000378043 ACADVLP49748 655 aa10.94□□□□□ -0.66
BEST1-201ENST00000378043 YBX1P67809 324 aaKnown RBP10.94□□□□□ -0.66
BEST1-201ENST00000378043 TRAP1Q12931 704 aaKnown RBP10.94□□□□□ -0.66
BEST1-201ENST00000378043 OR4D1Q15615 310 aa10.94□□□□□ -0.66
BEST1-201ENST00000378043 RAP1GAP2Q684P5 730 aa10.94□□□□□ -0.66
BEST1-201ENST00000378043 IL31Q6EBC2 164 aa10.94□□□□□ -0.66
BEST1-201ENST00000378043 HMBOX1Q6NT76 420 aa10.94□□□□□ -0.66
BEST1-201ENST00000378043 CHERPQ8IWX8 916 aaKnown RBP10.94□□□□□ -0.66
BEST1-201ENST00000378043 SOCS4Q8WXH5 440 aa10.94□□□□□ -0.66
BEST1-201ENST00000378043 EME1Q96AY2 570 aa10.94□□□□□ -0.66
BEST1-201ENST00000378043 DGCR14Q96DF8 476 aaKnown RBP10.94□□□□□ -0.66
BEST1-201ENST00000378043 DUS3LQ96G46 650 aaKnown RBP10.94□□□□□ -0.66
BEST1-201ENST00000378043 DNAJC1Q96KC8 554 aaKnown RBP10.94□□□□□ -0.66
BEST1-201ENST00000378043 ZNF597Q96LX8 424 aa10.94□□□□□ -0.66
BEST1-201ENST00000378043 SLC29A1Q99808 456 aa10.94□□□□□ -0.66
BEST1-201ENST00000378043 MAP10Q9P2G4 905 aa10.94□□□□□ -0.66
BEST1-201ENST00000378043 ANKRD36A6QL64 1941 aa10.94□□□□□ -0.66
BEST1-201ENST00000378043 A0A1B0GTL3 188 aa10.93□□□□□ -0.66
BEST1-201ENST00000378043 TRPA1O75762 1119 aa10.93□□□□□ -0.66
BEST1-201ENST00000378043 RTN3O95197 1032 aaPredicted RBP10.93□□□□□ -0.66
BEST1-201ENST00000378043 GOT2P00505 430 aaKnown RBP10.93□□□□□ -0.66
BEST1-201ENST00000378043 SLC2A3P11169 496 aa10.93□□□□□ -0.66
BEST1-201ENST00000378043 FGFR3P22607 806 aa10.93□□□□□ -0.66
BEST1-201ENST00000378043 ACVRL1P37023 503 aa10.93□□□□□ -0.66
BEST1-201ENST00000378043 SLC7A2P52569 658 aa10.93□□□□□ -0.66
BEST1-201ENST00000378043 IKBKEQ14164 716 aa10.93□□□□□ -0.66
BEST1-201ENST00000378043 HACD2Q6Y1H2 254 aa10.93□□□□□ -0.66
BEST1-201ENST00000378043 RBM44Q6ZP01 1051 aaKnown RBP10.93□□□□□ -0.66
BEST1-201ENST00000378043 RTN4RL1Q86UN2 441 aaPredicted RBP10.93□□□□□ -0.66
BEST1-201ENST00000378043 PHYKPLQ8IUZ5 450 aa10.93□□□□□ -0.66
BEST1-201ENST00000378043 HERC6Q8IVU3 1022 aa10.93□□□□□ -0.66
BEST1-201ENST00000378043 OR13C4Q8NGS5 318 aa10.93□□□□□ -0.66
BEST1-201ENST00000378043 GABPB2Q8TAK5 448 aaPredicted RBP10.93□□□□□ -0.66
BEST1-201ENST00000378043 EXT2Q93063 718 aa10.93□□□□□ -0.66
BEST1-201ENST00000378043 NSUN5Q96P11 429 aaKnown RBP10.93□□□□□ -0.66
BEST1-201ENST00000378043 UHRF1Q96T88 793 aaPredicted RBP10.93□□□□□ -0.66
BEST1-201ENST00000378043 SEMA3CQ99985 751 aa10.93□□□□□ -0.66
BEST1-201ENST00000378043 NDUFA13Q9P0J0 144 aa10.93□□□□□ -0.66
BEST1-201ENST00000378043 CROTQ9UKG9 612 aa10.93□□□□□ -0.66
BEST1-201ENST00000378043 FRMPD3Q5JV73 1810 aa10.93□□□□□ -0.66
BEST1-201ENST00000378043 CCDC162PA2VCL2 907 aa10.93□□□□□ -0.66
BEST1-201ENST00000378043 INPPL1O15357 1258 aa10.93□□□□□ -0.66
BEST1-201ENST00000378043 FAM58BPP0C7Q3 252 aa10.93□□□□□ -0.66
BEST1-201ENST00000378043 PIRTP0C851 137 aa10.93□□□□□ -0.66
BEST1-201ENST00000378043 PRSS56P0CW18 603 aa10.93□□□□□ -0.66
BEST1-201ENST00000378043 ZNF37AP17032 561 aaPredicted RBP10.93□□□□□ -0.66
BEST1-201ENST00000378043 PAX3P23760 479 aa10.93□□□□□ -0.66
BEST1-201ENST00000378043 SLC7A1P30825 629 aa10.93□□□□□ -0.66
BEST1-201ENST00000378043 HSPA13P48723 471 aa10.93□□□□□ -0.66
BEST1-201ENST00000378043 SUOXP51687 545 aa10.93□□□□□ -0.66
BEST1-201ENST00000378043 SERINC3Q13530 473 aa10.93□□□□□ -0.66
BEST1-201ENST00000378043 MYLK3Q32MK0 819 aa10.93□□□□□ -0.66
BEST1-201ENST00000378043 MTX3Q5HYI7 312 aa10.93□□□□□ -0.66
BEST1-201ENST00000378043 AMIGO2Q86SJ2 522 aa10.93□□□□□ -0.66
BEST1-201ENST00000378043 ZNF354CQ86Y25 554 aa10.93□□□□□ -0.66
BEST1-201ENST00000378043 MIB1Q86YT6 1006 aa10.93□□□□□ -0.66
BEST1-201ENST00000378043 CLYBLQ8N0X4 340 aa10.93□□□□□ -0.66
BEST1-201ENST00000378043 PTGR2Q8N8N7 351 aaPredicted RBP10.93□□□□□ -0.66
BEST1-201ENST00000378043 ZFP28Q8NHY6 868 aa10.93□□□□□ -0.66
BEST1-201ENST00000378043 TRIB2Q92519 343 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms