RNA–Protein interactions for RNA: ENST00000378037.9

CKAP2-203, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKAP2, Length 3,629 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-203ENST00000378037 PPP1R3AQ16821 1122 aa8.12□□□□□ -1.11
CKAP2-203ENST00000378037 SLC9B1Q4ZJI4 515 aa8.12□□□□□ -1.11
CKAP2-203ENST00000378037 AGAP9Q5VTM2 703 aa8.12□□□□□ -1.11
CKAP2-203ENST00000378037 OTUD1Q5VV17 481 aaPredicted RBP8.12□□□□□ -1.11
CKAP2-203ENST00000378037 SNX30Q5VWJ9 437 aa8.12□□□□□ -1.11
CKAP2-203ENST00000378037 TSPAN33Q86UF1 283 aa8.12□□□□□ -1.11
CKAP2-203ENST00000378037 HPS6Q86YV9 775 aa8.12□□□□□ -1.11
CKAP2-203ENST00000378037 RIBC1Q8N443 379 aaPredicted RBP8.12□□□□□ -1.11
CKAP2-203ENST00000378037 OR4L1Q8NH43 312 aa8.12□□□□□ -1.11
CKAP2-203ENST00000378037 NUDT8Q8WV74 236 aa8.12□□□□□ -1.11
CKAP2-203ENST00000378037 FOXJ1Q92949 421 aa8.12□□□□□ -1.11
CKAP2-203ENST00000378037 LRGUKQ96M69 825 aa8.12□□□□□ -1.11
CKAP2-203ENST00000378037 KLHL32Q96NJ5 620 aa8.12□□□□□ -1.11
CKAP2-203ENST00000378037 SMAD5Q99717 465 aaKnown RBP8.12□□□□□ -1.11
CKAP2-203ENST00000378037 CPNE1Q99829 537 aa8.12□□□□□ -1.11
CKAP2-203ENST00000378037 RXFP1Q9HBX9 757 aa8.12□□□□□ -1.11
CKAP2-203ENST00000378037 COPG2Q9UBF2 871 aa8.12□□□□□ -1.11
CKAP2-203ENST00000378037 KLQ9UEF7 1012 aa8.12□□□□□ -1.11
CKAP2-203ENST00000378037 DCDC2Q9UHG0 476 aa8.12□□□□□ -1.11
CKAP2-203ENST00000378037 HCFC2Q9Y5Z7 792 aa8.12□□□□□ -1.11
CKAP2-203ENST00000378037 DOCK8Q8NF50 2099 aa8.12□□□□□ -1.11
CKAP2-203ENST00000378037 POLEQ07864 2286 aa8.12□□□□□ -1.11
CKAP2-203ENST00000378037 HACD1B0YJ81 288 aa8.11□□□□□ -1.11
CKAP2-203ENST00000378037 CDC7O00311 574 aa8.11□□□□□ -1.11
CKAP2-203ENST00000378037 PRPF4O43172 522 aaKnown RBP eCLIP8.11□□□□□ -1.11
CKAP2-203ENST00000378037 PLIN3O60664 434 aa8.11□□□□□ -1.11
CKAP2-203ENST00000378037 MAFKO60675 156 aa8.11□□□□□ -1.11
CKAP2-203ENST00000378037 GBAP04062 536 aa8.11□□□□□ -1.11
CKAP2-203ENST00000378037 BPGMP07738 259 aa8.11□□□□□ -1.11
CKAP2-203ENST00000378037 ATP6V1B1P15313 513 aa8.11□□□□□ -1.11
CKAP2-203ENST00000378037 RPL10P27635 214 aaKnown RBP8.11□□□□□ -1.11
CKAP2-203ENST00000378037 COPAP53621 1224 aa8.11□□□□□ -1.11
CKAP2-203ENST00000378037 PPIDQ08752 370 aaKnown RBP8.11□□□□□ -1.11
CKAP2-203ENST00000378037 DBN1Q16643 649 aa8.11□□□□□ -1.11
CKAP2-203ENST00000378037 HECTD2Q5U5R9 776 aa8.11□□□□□ -1.11
CKAP2-203ENST00000378037 CLNKQ7Z7G1 428 aa8.11□□□□□ -1.11
CKAP2-203ENST00000378037 ARHGAP24Q8N264 748 aa8.11□□□□□ -1.11
CKAP2-203ENST00000378037 FBXO39Q8N4B4 442 aa8.11□□□□□ -1.11
CKAP2-203ENST00000378037 METTL6Q8TCB7 284 aa8.11□□□□□ -1.11
CKAP2-203ENST00000378037 PNPT1Q8TCS8 783 aaKnown RBP8.11□□□□□ -1.11
CKAP2-203ENST00000378037 CASD1Q96PB1 797 aa8.11□□□□□ -1.11
CKAP2-203ENST00000378037 C11orf49Q9H6J7 331 aa8.11□□□□□ -1.11
CKAP2-203ENST00000378037 MARCH5Q9NX47 278 aa8.11□□□□□ -1.11
CKAP2-203ENST00000378037 FAM53CQ9NYF3 392 aa8.11□□□□□ -1.11
CKAP2-203ENST00000378037 DONSONQ9NYP3 566 aa8.11□□□□□ -1.11
CKAP2-203ENST00000378037 VPS4AQ9UN37 437 aa8.11□□□□□ -1.11
CKAP2-203ENST00000378037 INSL5Q9Y5Q6 135 aa8.11□□□□□ -1.11
CKAP2-203ENST00000378037 FRMPD3Q5JV73 1810 aa8.11□□□□□ -1.11
CKAP2-203ENST00000378037 TRAV19A0A0A6YYK7 116 aa8.11□□□□□ -1.11
CKAP2-203ENST00000378037 ZNF840PA6NDX5 716 aa8.11□□□□□ -1.11
CKAP2-203ENST00000378037 SLC31A1O15431 190 aa8.11□□□□□ -1.11
CKAP2-203ENST00000378037 SERPINE1P05121 402 aa8.11□□□□□ -1.11
CKAP2-203ENST00000378037 MAP2K2P36507 400 aa8.11□□□□□ -1.11
CKAP2-203ENST00000378037 HSPA7P48741 367 aa8.11□□□□□ -1.11
CKAP2-203ENST00000378037 MAPK10P53779 464 aa8.11□□□□□ -1.11
CKAP2-203ENST00000378037 RAB10P61026 200 aa8.11□□□□□ -1.11
CKAP2-203ENST00000378037 CYP4F2P78329 520 aa8.11□□□□□ -1.11
CKAP2-203ENST00000378037 UAP1L1Q3KQV9 507 aa8.11□□□□□ -1.11
CKAP2-203ENST00000378037 SPANXN3Q5MJ09 141 aa8.11□□□□□ -1.11
CKAP2-203ENST00000378037 PRAMEF14Q5SWL7 426 aa8.11□□□□□ -1.11
CKAP2-203ENST00000378037 SYTL1Q8IYJ3 562 aa8.11□□□□□ -1.11
CKAP2-203ENST00000378037 GDPD5Q8WTR4 605 aa8.11□□□□□ -1.11
CKAP2-203ENST00000378037 RCN3Q96D15 328 aa8.11□□□□□ -1.11
CKAP2-203ENST00000378037 C2orf49Q9BVC5 232 aaPredicted RBP8.11□□□□□ -1.11
CKAP2-203ENST00000378037 BOCQ9BWV1 1114 aa8.11□□□□□ -1.11
CKAP2-203ENST00000378037 ACTR8Q9H981 624 aa8.11□□□□□ -1.11
CKAP2-203ENST00000378037 SLC24A3Q9HC58 644 aa8.11□□□□□ -1.11
CKAP2-203ENST00000378037 SUN2Q9UH99 717 aa8.11□□□□□ -1.11
CKAP2-203ENST00000378037 H3BQ06 376 aaPredicted RBP8.11□□□□□ -1.11
CKAP2-203ENST00000378037 SAP18O00422 153 aaKnown RBP8.11□□□□□ -1.11
CKAP2-203ENST00000378037 FGF10O15520 208 aaPredicted RBP8.11□□□□□ -1.11
CKAP2-203ENST00000378037 CCDC22O60826 627 aa8.11□□□□□ -1.11
CKAP2-203ENST00000378037 VPS26AO75436 327 aa8.11□□□□□ -1.11
CKAP2-203ENST00000378037 GMNNO75496 209 aa8.11□□□□□ -1.11
CKAP2-203ENST00000378037 RFPL1O75677 317 aa8.11□□□□□ -1.11
CKAP2-203ENST00000378037 STC2O76061 302 aa8.11□□□□□ -1.11
CKAP2-203ENST00000378037 CRTAMO95727 393 aa8.11□□□□□ -1.11
CKAP2-203ENST00000378037 NFKBIAP25963 317 aa8.11□□□□□ -1.11
CKAP2-203ENST00000378037 CD70P32970 193 aa8.11□□□□□ -1.11
CKAP2-203ENST00000378037 ABCE1P61221 599 aaKnown RBP8.11□□□□□ -1.11
CKAP2-203ENST00000378037 LRRC74AQ0VAA2 488 aa8.11□□□□□ -1.11
CKAP2-203ENST00000378037 PCBP1Q15365 356 aaKnown RBP eCLIP8.11□□□□□ -1.11
CKAP2-203ENST00000378037 NRF1Q16656 503 aa8.11□□□□□ -1.11
CKAP2-203ENST00000378037 PABPC1LQ4VXU2 614 aaKnown RBP8.11□□□□□ -1.11
CKAP2-203ENST00000378037 FBXL19Q6PCT2 694 aa8.11□□□□□ -1.11
CKAP2-203ENST00000378037 ANKRD46Q86W74 232 aa8.11□□□□□ -1.11
CKAP2-203ENST00000378037 FNDC5Q8NAU1 212 aa8.11□□□□□ -1.11
CKAP2-203ENST00000378037 RBM15BQ8NDT2 890 aaKnown RBP8.11□□□□□ -1.11
CKAP2-203ENST00000378037 SHKBP1Q8TBC3 707 aa8.11□□□□□ -1.11
CKAP2-203ENST00000378037 UROC1Q96N76 676 aa8.11□□□□□ -1.11
CKAP2-203ENST00000378037 ADGRE3Q9BY15 652 aa8.11□□□□□ -1.11
CKAP2-203ENST00000378037 KLHL25Q9H0H3 589 aa8.11□□□□□ -1.11
CKAP2-203ENST00000378037 ZNF334Q9HCZ1 680 aaPredicted RBP8.11□□□□□ -1.11
CKAP2-203ENST00000378037 THAP1Q9NVV9 213 aa8.11□□□□□ -1.11
CKAP2-203ENST00000378037 ARL15Q9NXU5 204 aa8.11□□□□□ -1.11
CKAP2-203ENST00000378037 Q9Y3F1 56 aa8.11□□□□□ -1.11
CKAP2-203ENST00000378037 DGKBQ9Y6T7 804 aa8.11□□□□□ -1.11
CKAP2-203ENST00000378037 PDZK1P1A8MUH7 402 aa8.1□□□□□ -1.11
CKAP2-203ENST00000378037 GNGT2O14610 69 aa8.1□□□□□ -1.11
CKAP2-203ENST00000378037 MAP3K13O43283 966 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms