RNA–Protein interactions for RNA: ENST00000377877.4

RNF38-205, Transcript of ring finger protein 38, humanhuman

TSL 2 BASIC

Gene RNF38, Length 1,974 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-205ENST00000377877 HMX2A2RU54 273 aa21.1■□□□□ 0.97
RNF38-205ENST00000377877 CRTAMO95727 393 aa21.1■□□□□ 0.97
RNF38-205ENST00000377877 GTF2A1P52655 376 aaPredicted RBP21.1■□□□□ 0.97
RNF38-205ENST00000377877 ZNF140P52738 457 aaPredicted RBP21.1■□□□□ 0.97
RNF38-205ENST00000377877 METAP1P53582 386 aa21.1■□□□□ 0.97
RNF38-205ENST00000377877 SEC13P55735 322 aa21.1■□□□□ 0.97
RNF38-205ENST00000377877 ACVR1Q04771 509 aa21.1■□□□□ 0.97
RNF38-205ENST00000377877 GRM3Q14832 879 aa21.1■□□□□ 0.97
RNF38-205ENST00000377877 ARMC3Q5W041 872 aa21.1■□□□□ 0.97
RNF38-205ENST00000377877 LYSMD3Q7Z3D4 306 aa21.1■□□□□ 0.97
RNF38-205ENST00000377877 CDKL2Q92772 493 aa21.1■□□□□ 0.97
RNF38-205ENST00000377877 CCDC134Q9H6E4 229 aa21.1■□□□□ 0.97
RNF38-205ENST00000377877 BPIFA1Q9NP55 256 aa21.1■□□□□ 0.97
RNF38-205ENST00000377877 PHTF1Q9UMS5 762 aa21.1■□□□□ 0.97
RNF38-205ENST00000377877 EDDM13A0A1B0GTR0 161 aa21.09■□□□□ 0.97
RNF38-205ENST00000377877 CTBP1Q13363 440 aa21.09■□□□□ 0.97
RNF38-205ENST00000377877 PON2Q15165 354 aa21.09■□□□□ 0.97
RNF38-205ENST00000377877 PREPLQ4J6C6 727 aaPredicted RBP21.09■□□□□ 0.97
RNF38-205ENST00000377877 ZNF449Q6P9G9 518 aa21.09■□□□□ 0.97
RNF38-205ENST00000377877 PACS1Q6VY07 963 aa21.09■□□□□ 0.97
RNF38-205ENST00000377877 DENND6AQ8IWF6 608 aa21.09■□□□□ 0.97
RNF38-205ENST00000377877 CCDC197Q8NCU1 140 aa21.09■□□□□ 0.97
RNF38-205ENST00000377877 STYXQ8WUJ0 223 aa21.09■□□□□ 0.97
RNF38-205ENST00000377877 INTS9Q9NV88 658 aaKnown RBP21.09■□□□□ 0.97
RNF38-205ENST00000377877 PPIL1Q9Y3C6 166 aa21.09■□□□□ 0.97
RNF38-205ENST00000377877 ZNF711Q9Y462 761 aa21.09■□□□□ 0.97
RNF38-205ENST00000377877 C2orf81A6NN90 581 aa21.08■□□□□ 0.97
RNF38-205ENST00000377877 CLDN7O95471 211 aa21.08■□□□□ 0.97
RNF38-205ENST00000377877 LPOP22079 712 aaPredicted RBP21.08■□□□□ 0.97
RNF38-205ENST00000377877 TNFRSF4P43489 277 aa21.08■□□□□ 0.97
RNF38-205ENST00000377877 KIR2DL1P43626 348 aaPredicted RBP21.08■□□□□ 0.97
RNF38-205ENST00000377877 PTAR1Q7Z6K3 402 aaPredicted RBP21.08■□□□□ 0.97
RNF38-205ENST00000377877 TSPAN33Q86UF1 283 aa21.08■□□□□ 0.97
RNF38-205ENST00000377877 ANKS4BQ8N8V4 417 aa21.08■□□□□ 0.97
RNF38-205ENST00000377877 OR6P1Q8NGX9 317 aa21.08■□□□□ 0.97
RNF38-205ENST00000377877 SCRN2Q96FV2 425 aa21.08■□□□□ 0.97
RNF38-205ENST00000377877 CDKN2AIPNLQ96HQ2 116 aa21.08■□□□□ 0.97
RNF38-205ENST00000377877 ZNF317Q96PQ6 595 aaPredicted RBP21.08■□□□□ 0.97
RNF38-205ENST00000377877 NSRP1Q9H0G5 558 aaKnown RBP21.08■□□□□ 0.97
RNF38-205ENST00000377877 NLE1Q9NVX2 485 aaPredicted RBP21.08■□□□□ 0.97
RNF38-205ENST00000377877 ZNF180Q9UJW8 692 aa21.08■□□□□ 0.97
RNF38-205ENST00000377877 STON1Q9Y6Q2 735 aa21.08■□□□□ 0.97
RNF38-205ENST00000377877 CCDC162PA2VCL2 907 aa21.08■□□□□ 0.96
RNF38-205ENST00000377877 NPIPB15A6NHN6 443 aaPredicted RBP21.08■□□□□ 0.96
RNF38-205ENST00000377877 SHISA7A6NL88 538 aa21.08■□□□□ 0.96
RNF38-205ENST00000377877 EGFP01133 1207 aa21.08■□□□□ 0.96
RNF38-205ENST00000377877 EPHX1P07099 455 aa21.08■□□□□ 0.96
RNF38-205ENST00000377877 CHRM1P11229 460 aaPredicted RBP21.08■□□□□ 0.96
RNF38-205ENST00000377877 HNRNPLP14866 589 aaKnown RBP eCLIP21.08■□□□□ 0.96
RNF38-205ENST00000377877 TIMP2P16035 220 aa21.08■□□□□ 0.96
RNF38-205ENST00000377877 KRT15P19012 456 aa21.08■□□□□ 0.96
RNF38-205ENST00000377877 PAMP19021 973 aa21.08■□□□□ 0.96
RNF38-205ENST00000377877 GABRB3P28472 473 aa21.08■□□□□ 0.96
RNF38-205ENST00000377877 TIE1P35590 1138 aa21.08■□□□□ 0.96
RNF38-205ENST00000377877 ABCG1P45844 678 aa21.08■□□□□ 0.96
RNF38-205ENST00000377877 LAMB3Q13751 1172 aa21.08■□□□□ 0.96
RNF38-205ENST00000377877 BMPR2Q13873 1038 aa21.08■□□□□ 0.96
RNF38-205ENST00000377877 NEPROQ6NW34 567 aa21.08■□□□□ 0.96
RNF38-205ENST00000377877 NUDT18Q6ZVK8 323 aa21.08■□□□□ 0.96
RNF38-205ENST00000377877 STRA8Q7Z7C7 330 aa21.08■□□□□ 0.96
RNF38-205ENST00000377877 TRABD2AQ86V40 505 aa21.08■□□□□ 0.96
RNF38-205ENST00000377877 GPR63Q9BZJ6 419 aa21.08■□□□□ 0.96
RNF38-205ENST00000377877 KDM4CQ9H3R0 1056 aa21.08■□□□□ 0.96
RNF38-205ENST00000377877 PRSS16Q9NQE7 514 aa21.08■□□□□ 0.96
RNF38-205ENST00000377877 HACD3Q9P035 362 aa21.08■□□□□ 0.96
RNF38-205ENST00000377877 RIMKLBQ9ULI2 386 aa21.08■□□□□ 0.96
RNF38-205ENST00000377877 PSMA3P25788 255 aa21.07■□□□□ 0.96
RNF38-205ENST00000377877 SWT1Q5T5J6 900 aaKnown RBP21.07■□□□□ 0.96
RNF38-205ENST00000377877 MROH9Q5TGP6 573 aa21.07■□□□□ 0.96
RNF38-205ENST00000377877 FSTL4Q6MZW2 842 aa21.07■□□□□ 0.96
RNF38-205ENST00000377877 CRTC1Q6UUV9 634 aa21.07■□□□□ 0.96
RNF38-205ENST00000377877 RALGPS2Q86X27 583 aaPredicted RBP21.07■□□□□ 0.96
RNF38-205ENST00000377877 SRRM1Q8IYB3 904 aaKnown RBP21.07■□□□□ 0.96
RNF38-205ENST00000377877 ZNF513Q8N8E2 541 aaPredicted RBP21.07■□□□□ 0.96
RNF38-205ENST00000377877 SPOCK2Q92563 424 aa21.07■□□□□ 0.96
RNF38-205ENST00000377877 POLR3BQ9NW08 1133 aaPredicted RBP21.07■□□□□ 0.96
RNF38-205ENST00000377877 IL17CQ9P0M4 197 aa21.07■□□□□ 0.96
RNF38-205ENST00000377877 PPM1HQ9ULR3 514 aa21.07■□□□□ 0.96
RNF38-205ENST00000377877 CAPN8A6NHC0 703 aa21.06■□□□□ 0.96
RNF38-205ENST00000377877 SLC7A4O43246 635 aa21.06■□□□□ 0.96
RNF38-205ENST00000377877 RPP40O75818 363 aaKnown RBP21.06■□□□□ 0.96
RNF38-205ENST00000377877 GOT2P00505 430 aaKnown RBP21.06■□□□□ 0.96
RNF38-205ENST00000377877 AHSGP02765 367 aa21.06■□□□□ 0.96
RNF38-205ENST00000377877 PRSS56P0CW18 603 aa21.06■□□□□ 0.96
RNF38-205ENST00000377877 ATP5DP30049 168 aa21.06■□□□□ 0.96
RNF38-205ENST00000377877 PRAMEP78395 509 aa21.06■□□□□ 0.96
RNF38-205ENST00000377877 THOC5Q13769 683 aaKnown RBP21.06■□□□□ 0.96
RNF38-205ENST00000377877 ENPP2Q13822 863 aa21.06■□□□□ 0.96
RNF38-205ENST00000377877 ITIH4Q14624 930 aa21.06■□□□□ 0.96
RNF38-205ENST00000377877 UGP2Q16851 508 aa21.06■□□□□ 0.96
RNF38-205ENST00000377877 C2orf27AQ580R0 203 aa21.06■□□□□ 0.96
RNF38-205ENST00000377877 ZNF805Q5CZA5 627 aa21.06■□□□□ 0.96
RNF38-205ENST00000377877 LDB1Q86U70 411 aaPredicted RBP21.06■□□□□ 0.96
RNF38-205ENST00000377877 CHPFQ8IZ52 775 aa21.06■□□□□ 0.96
RNF38-205ENST00000377877 PEX13Q92968 403 aa21.06■□□□□ 0.96
RNF38-205ENST00000377877 LRIG1Q96JA1 1093 aa21.06■□□□□ 0.96
RNF38-205ENST00000377877 KLF6Q99612 283 aaPredicted RBP21.06■□□□□ 0.96
RNF38-205ENST00000377877 MARCH4Q9P2E8 410 aaPredicted RBP21.06■□□□□ 0.96
RNF38-205ENST00000377877 C1orf232A0A0U1RR37 186 aa21.06■□□□□ 0.96
RNF38-205ENST00000377877 TRIM49D1C9J1S8 452 aa21.06■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 166.7 ms