RNA–Protein interactions for RNA: ENST00000377670.8

HIF3A-205, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HIF3A, Length 5,852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-205ENST00000377670 HMG20AQ9NP66 347 aa10.84□□□□□ -0.67
HIF3A-205ENST00000377670 DNAJC28Q9NX36 388 aa10.84□□□□□ -0.67
HIF3A-205ENST00000377670 MKL2Q9ULH7 1088 aa10.84□□□□□ -0.67
HIF3A-205ENST00000377670 CORO1CQ9ULV4 474 aaPredicted RBP10.84□□□□□ -0.67
HIF3A-205ENST00000377670 SIGLEC16A6NMB1 481 aa10.83□□□□□ -0.68
HIF3A-205ENST00000377670 ATG7O95352 703 aa10.83□□□□□ -0.68
HIF3A-205ENST00000377670 ERBB2P04626 1255 aa10.83□□□□□ -0.68
HIF3A-205ENST00000377670 GOT1P17174 413 aa10.83□□□□□ -0.68
HIF3A-205ENST00000377670 CTPS1P17812 591 aa10.83□□□□□ -0.68
HIF3A-205ENST00000377670 TALDO1P37837 337 aa10.83□□□□□ -0.68
HIF3A-205ENST00000377670 CD151P48509 253 aa10.83□□□□□ -0.68
HIF3A-205ENST00000377670 PIK3CGP48736 1102 aa10.83□□□□□ -0.68
HIF3A-205ENST00000377670 SPIRE1Q08AE8 756 aa10.83□□□□□ -0.68
HIF3A-205ENST00000377670 FASTKQ14296 549 aaKnown RBP10.83□□□□□ -0.68
HIF3A-205ENST00000377670 RBM44Q6ZP01 1051 aaKnown RBP10.83□□□□□ -0.68
HIF3A-205ENST00000377670 CCDC185Q8N715 623 aa10.83□□□□□ -0.68
HIF3A-205ENST00000377670 C1orf127Q8N9H9 656 aa10.83□□□□□ -0.68
HIF3A-205ENST00000377670 UXS1Q8NBZ7 420 aa10.83□□□□□ -0.68
HIF3A-205ENST00000377670 AUTS2Q8WXX7 1259 aa10.83□□□□□ -0.68
HIF3A-205ENST00000377670 NECTIN4Q96NY8 510 aa10.83□□□□□ -0.68
HIF3A-205ENST00000377670 VAT1Q99536 393 aa10.83□□□□□ -0.68
HIF3A-205ENST00000377670 PHACTR1Q9C0D0 580 aa10.83□□□□□ -0.68
HIF3A-205ENST00000377670 CLEC4MQ9H2X3 399 aaPredicted RBP10.83□□□□□ -0.68
HIF3A-205ENST00000377670 PCDH9Q9HC56 1237 aa10.83□□□□□ -0.68
HIF3A-205ENST00000377670 FANCFQ9NPI8 374 aa10.83□□□□□ -0.68
HIF3A-205ENST00000377670 CATSPERZQ9NTU4 200 aa10.83□□□□□ -0.68
HIF3A-205ENST00000377670 PRKAG3Q9UGI9 489 aa10.83□□□□□ -0.68
HIF3A-205ENST00000377670 GTF2IRD1Q9UHL9 959 aa10.83□□□□□ -0.68
HIF3A-205ENST00000377670 ANAPC2Q9UJX6 822 aa10.83□□□□□ -0.68
HIF3A-205ENST00000377670 KLHL20Q9Y2M5 609 aa10.83□□□□□ -0.68
HIF3A-205ENST00000377670 Q9Y3F1 56 aa10.83□□□□□ -0.68
HIF3A-205ENST00000377670 SNTNA6NMZ2 147 aa10.83□□□□□ -0.68
HIF3A-205ENST00000377670 GTPBP1O00178 669 aaKnown RBP10.83□□□□□ -0.68
HIF3A-205ENST00000377670 CES1P23141 567 aa10.83□□□□□ -0.68
HIF3A-205ENST00000377670 CD86P42081 329 aa10.83□□□□□ -0.68
HIF3A-205ENST00000377670 SERPINH1P50454 418 aaKnown RBP10.83□□□□□ -0.68
HIF3A-205ENST00000377670 DUSP3P51452 185 aaPredicted RBP10.83□□□□□ -0.68
HIF3A-205ENST00000377670 PTPN20Q4JDL3 420 aa10.83□□□□□ -0.68
HIF3A-205ENST00000377670 CELF5Q8N6W0 485 aaKnown RBP10.83□□□□□ -0.68
HIF3A-205ENST00000377670 FAM126AQ9BYI3 521 aaPredicted RBP10.83□□□□□ -0.68
HIF3A-205ENST00000377670 ZNF112Q9UJU3 913 aa10.83□□□□□ -0.68
HIF3A-205ENST00000377670 CA14Q9ULX7 337 aa10.83□□□□□ -0.68
HIF3A-205ENST00000377670 MAN2B1O00754 1011 aa10.83□□□□□ -0.68
HIF3A-205ENST00000377670 STBD1O95210 358 aa10.83□□□□□ -0.68
HIF3A-205ENST00000377670 LDLRP01130 860 aa10.83□□□□□ -0.68
HIF3A-205ENST00000377670 NOS3P29474 1203 aa10.83□□□□□ -0.68
HIF3A-205ENST00000377670 ARL2P36404 184 aa10.83□□□□□ -0.68
HIF3A-205ENST00000377670 NR2C2P49116 596 aa10.83□□□□□ -0.68
HIF3A-205ENST00000377670 PERM1Q5SV97 790 aa10.83□□□□□ -0.68
HIF3A-205ENST00000377670 ARMC3Q5W041 872 aa10.83□□□□□ -0.68
HIF3A-205ENST00000377670 HEXDCQ8WVB3 486 aa10.83□□□□□ -0.68
HIF3A-205ENST00000377670 RNF145Q96MT1 663 aa10.83□□□□□ -0.68
HIF3A-205ENST00000377670 GMLQ99445 158 aa10.83□□□□□ -0.68
HIF3A-205ENST00000377670 TBCDQ9BTW9 1192 aa10.83□□□□□ -0.68
HIF3A-205ENST00000377670 SERHL2Q9H4I8 314 aa10.83□□□□□ -0.68
HIF3A-205ENST00000377670 SERHLQ9NQF3 203 aa10.83□□□□□ -0.68
HIF3A-205ENST00000377670 ERVK-11Q9UQG0 969 aa10.83□□□□□ -0.68
HIF3A-205ENST00000377670 ACOT9Q9Y305 439 aa10.83□□□□□ -0.68
HIF3A-205ENST00000377670 COMMD3-BMI1R4GMX3 469 aa10.83□□□□□ -0.68
HIF3A-205ENST00000377670 SMIM28A0A1B0GU29 152 aa10.83□□□□□ -0.68
HIF3A-205ENST00000377670 SH3BGRLO75368 114 aa10.83□□□□□ -0.68
HIF3A-205ENST00000377670 SLC25A12O75746 678 aa10.83□□□□□ -0.68
HIF3A-205ENST00000377670 FGF18O76093 207 aa10.83□□□□□ -0.68
HIF3A-205ENST00000377670 C4BPAP04003 597 aaKnown RBP10.83□□□□□ -0.68
HIF3A-205ENST00000377670 PDE12Q6L8Q7 609 aaKnown RBP10.83□□□□□ -0.68
HIF3A-205ENST00000377670 STK32CQ86UX6 486 aa10.83□□□□□ -0.68
HIF3A-205ENST00000377670 FAM129CQ86XR2 697 aa10.83□□□□□ -0.68
HIF3A-205ENST00000377670 DHRSXQ8N5I4 330 aa10.83□□□□□ -0.68
HIF3A-205ENST00000377670 CKAP2Q8WWK9 683 aa10.83□□□□□ -0.68
HIF3A-205ENST00000377670 CENPTQ96BT3 561 aa10.83□□□□□ -0.68
HIF3A-205ENST00000377670 LGMNQ99538 433 aa10.83□□□□□ -0.68
HIF3A-205ENST00000377670 TBC1D10AQ9BXI6 508 aa10.83□□□□□ -0.68
HIF3A-205ENST00000377670 MCOLN1Q9GZU1 580 aa10.83□□□□□ -0.68
HIF3A-205ENST00000377670 RIBC2Q9H4K1 309 aa10.83□□□□□ -0.68
HIF3A-205ENST00000377670 PDZD7Q9H5P4 517 aa10.83□□□□□ -0.68
HIF3A-205ENST00000377670 TMEM165Q9HC07 324 aa10.83□□□□□ -0.68
HIF3A-205ENST00000377670 MRPL39Q9NYK5 338 aaKnown RBP10.83□□□□□ -0.68
HIF3A-205ENST00000377670 MRTO4Q9UKD2 239 aaKnown RBP10.83□□□□□ -0.68
HIF3A-205ENST00000377670 GABRQQ9UN88 632 aa10.83□□□□□ -0.68
HIF3A-205ENST00000377670 A0A1W2PRU2 124 aa10.83□□□□□ -0.68
HIF3A-205ENST00000377670 LCA5LO95447 670 aa10.83□□□□□ -0.68
HIF3A-205ENST00000377670 UGT2B4P06133 528 aa10.83□□□□□ -0.68
HIF3A-205ENST00000377670 CSTF2P33240 577 aaKnown RBP eCLIP10.83□□□□□ -0.68
HIF3A-205ENST00000377670 FAAP100Q0VG06 881 aa10.83□□□□□ -0.68
HIF3A-205ENST00000377670 MPP3Q13368 585 aa10.83□□□□□ -0.68
HIF3A-205ENST00000377670 TMEM63BQ5T3F8 832 aa10.83□□□□□ -0.68
HIF3A-205ENST00000377670 C11orf88Q6PI97 169 aa10.83□□□□□ -0.68
HIF3A-205ENST00000377670 NET1Q7Z628 596 aaPredicted RBP10.83□□□□□ -0.68
HIF3A-205ENST00000377670 EID3Q8N140 333 aa10.83□□□□□ -0.68
HIF3A-205ENST00000377670 OR6K2Q8NGY2 324 aa10.83□□□□□ -0.68
HIF3A-205ENST00000377670 PIGKQ92643 395 aa10.83□□□□□ -0.68
HIF3A-205ENST00000377670 FAM120BQ96EK7 910 aaKnown RBP10.83□□□□□ -0.68
HIF3A-205ENST00000377670 NSMCE2Q96MF7 247 aa10.83□□□□□ -0.68
HIF3A-205ENST00000377670 DPEP3Q9H4B8 488 aa10.83□□□□□ -0.68
HIF3A-205ENST00000377670 BPIFA1Q9NP55 256 aa10.83□□□□□ -0.68
HIF3A-205ENST00000377670 DUSP12Q9UNI6 340 aa10.83□□□□□ -0.68
HIF3A-205ENST00000377670 LRRC37A3O60309 1634 aa10.82□□□□□ -0.68
HIF3A-205ENST00000377670 ALADP13716 330 aa10.82□□□□□ -0.68
HIF3A-205ENST00000377670 DDX6P26196 483 aaKnown RBP eCLIP10.82□□□□□ -0.68
HIF3A-205ENST00000377670 HNF4AP41235 474 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms