RNA–Protein interactions for RNA: ENST00000376634.8

VPS13A-204, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13A, Length 10,269 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-204ENST00000376634 CCDC28BQ9BUN5 200 aa12.49□□□□□ -0.41
VPS13A-204ENST00000376634 MED28Q9H204 178 aa12.49□□□□□ -0.41
VPS13A-204ENST00000376634 ZSCAN5CA6NGD5 496 aaPredicted RBP12.49□□□□□ -0.41
VPS13A-204ENST00000376634 SCN2BO60939 215 aa12.49□□□□□ -0.41
VPS13A-204ENST00000376634 CTDNEP1O95476 244 aa12.49□□□□□ -0.41
VPS13A-204ENST00000376634 S100A2P29034 98 aa12.49□□□□□ -0.41
VPS13A-204ENST00000376634 GALNT7Q86SF2 657 aa12.49□□□□□ -0.41
VPS13A-204ENST00000376634 UBE2Q2LH0YL09 131 aa12.48□□□□□ -0.41
VPS13A-204ENST00000376634 COX4I1P13073 169 aa12.48□□□□□ -0.41
VPS13A-204ENST00000376634 SOX10P56693 466 aa12.48□□□□□ -0.41
VPS13A-204ENST00000376634 PARP6Q2NL67 630 aa12.48□□□□□ -0.41
VPS13A-204ENST00000376634 CXorf57Q6NSI4 855 aaKnown RBP12.48□□□□□ -0.41
VPS13A-204ENST00000376634 ZNF615Q8N8J6 731 aa12.48□□□□□ -0.41
VPS13A-204ENST00000376634 FAM81AQ8TBF8 368 aa12.48□□□□□ -0.41
VPS13A-204ENST00000376634 A0A087X0B3 334 aa12.48□□□□□ -0.41
VPS13A-204ENST00000376634 CASKO14936 926 aa12.48□□□□□ -0.41
VPS13A-204ENST00000376634 MATN4O95460 622 aa12.48□□□□□ -0.41
VPS13A-204ENST00000376634 PIK3R6Q5UE93 754 aa12.48□□□□□ -0.41
VPS13A-204ENST00000376634 TNFAIP8L1Q8WVP5 186 aa12.48□□□□□ -0.41
VPS13A-204ENST00000376634 L2HGDHQ9H9P8 463 aa12.48□□□□□ -0.41
VPS13A-204ENST00000376634 SULT2A1Q06520 285 aa12.48□□□□□ -0.41
VPS13A-204ENST00000376634 UBAP2LQ14157 1087 aaKnown RBP12.48□□□□□ -0.41
VPS13A-204ENST00000376634 DHDDSQ86SQ9 333 aa12.48□□□□□ -0.41
VPS13A-204ENST00000376634 UBR7Q8N806 425 aa12.48□□□□□ -0.41
VPS13A-204ENST00000376634 RNPEPL1Q9HAU8 725 aa12.48□□□□□ -0.41
VPS13A-204ENST00000376634 E5RJQ4 531 aa12.48□□□□□ -0.41
VPS13A-204ENST00000376634 USP12O75317 370 aa12.48□□□□□ -0.41
VPS13A-204ENST00000376634 IL1R1P14778 569 aa12.48□□□□□ -0.41
VPS13A-204ENST00000376634 HNF4AP41235 474 aa12.48□□□□□ -0.41
VPS13A-204ENST00000376634 OCLNQ16625 522 aa12.48□□□□□ -0.41
VPS13A-204ENST00000376634 CDYL2Q8N8U2 506 aa12.48□□□□□ -0.41
VPS13A-204ENST00000376634 FAR1Q8WVX9 515 aa12.48□□□□□ -0.41
VPS13A-204ENST00000376634 GORASP1Q9BQQ3 440 aa12.48□□□□□ -0.41
VPS13A-204ENST00000376634 DPEP1P16444 411 aa12.48□□□□□ -0.41
VPS13A-204ENST00000376634 IKBKEQ14164 716 aa12.48□□□□□ -0.41
VPS13A-204ENST00000376634 ATP13A5Q4VNC0 1218 aa12.48□□□□□ -0.41
VPS13A-204ENST00000376634 RNF31Q96EP0 1072 aa12.48□□□□□ -0.41
VPS13A-204ENST00000376634 CERS2Q96G23 380 aa12.48□□□□□ -0.41
VPS13A-204ENST00000376634 OR7A10O76100 309 aa12.48□□□□□ -0.41
VPS13A-204ENST00000376634 C9P02748 559 aa12.48□□□□□ -0.41
VPS13A-204ENST00000376634 GRSF1Q12849 480 aaKnown RBP eCLIP12.48□□□□□ -0.41
VPS13A-204ENST00000376634 TCAIMQ8N3R3 496 aa12.48□□□□□ -0.41
VPS13A-204ENST00000376634 OR52K1Q8NGK4 314 aa12.48□□□□□ -0.41
VPS13A-204ENST00000376634 TATDN2Q93075 761 aa12.48□□□□□ -0.41
VPS13A-204ENST00000376634 ZYG11BQ9C0D3 744 aa12.48□□□□□ -0.41
VPS13A-204ENST00000376634 EHD4Q9H223 541 aa12.48□□□□□ -0.41
VPS13A-204ENST00000376634 EXD2Q9NVH0 621 aa12.48□□□□□ -0.41
VPS13A-204ENST00000376634 TBL1XO60907 577 aa12.48□□□□□ -0.41
VPS13A-204ENST00000376634 CRADDP78560 199 aa12.48□□□□□ -0.41
VPS13A-204ENST00000376634 FAM131AQ6UXB0 335 aa12.48□□□□□ -0.41
VPS13A-204ENST00000376634 FRMPD4Q14CM0 1322 aa12.48□□□□□ -0.41
VPS13A-204ENST00000376634 PDHXO00330 501 aa12.48□□□□□ -0.41
VPS13A-204ENST00000376634 LINC00032P0C843 101 aa12.48□□□□□ -0.41
VPS13A-204ENST00000376634 CDH5P33151 784 aaPredicted RBP12.48□□□□□ -0.41
VPS13A-204ENST00000376634 AP1S1P61966 158 aa12.48□□□□□ -0.41
VPS13A-204ENST00000376634 DPYSQ14117 519 aa12.48□□□□□ -0.41
VPS13A-204ENST00000376634 TRPV2Q9Y5S1 764 aa12.48□□□□□ -0.41
VPS13A-204ENST00000376634 ACTL7BQ9Y614 415 aa12.48□□□□□ -0.41
VPS13A-204ENST00000376634 OAS3Q9Y6K5 1087 aaKnown RBP12.48□□□□□ -0.41
VPS13A-204ENST00000376634 PLK4O00444 970 aa12.47□□□□□ -0.41
VPS13A-204ENST00000376634 RFXANKO14593 260 aa12.47□□□□□ -0.41
VPS13A-204ENST00000376634 UTS2BQ765I0 119 aa12.47□□□□□ -0.41
VPS13A-204ENST00000376634 RDH11Q8TC12 318 aa12.47□□□□□ -0.41
VPS13A-204ENST00000376634 WNT8BQ93098 351 aa12.47□□□□□ -0.41
VPS13A-204ENST00000376634 PPCDCQ96CD2 204 aa12.47□□□□□ -0.41
VPS13A-204ENST00000376634 CORO1BQ9BR76 489 aa12.47□□□□□ -0.41
VPS13A-204ENST00000376634 RGL2O15211 777 aa12.47□□□□□ -0.41
VPS13A-204ENST00000376634 CES1P23141 567 aa12.47□□□□□ -0.41
VPS13A-204ENST00000376634 CDH8P55286 799 aa12.47□□□□□ -0.41
VPS13A-204ENST00000376634 BMT2Q1RMZ1 405 aa12.47□□□□□ -0.41
VPS13A-204ENST00000376634 ACER1Q8TDN7 264 aa12.47□□□□□ -0.41
VPS13A-204ENST00000376634 SNX7Q9UNH6 387 aa12.47□□□□□ -0.41
VPS13A-204ENST00000376634 SIGLEC16A6NMB1 481 aa12.47□□□□□ -0.41
VPS13A-204ENST00000376634 NR2F6P10588 404 aa12.47□□□□□ -0.41
VPS13A-204ENST00000376634 IFI35P80217 286 aaPredicted RBP12.47□□□□□ -0.41
VPS13A-204ENST00000376634 KCNA10Q16322 511 aa12.47□□□□□ -0.41
VPS13A-204ENST00000376634 CHSY3Q70JA7 882 aa12.47□□□□□ -0.41
VPS13A-204ENST00000376634 PARGQ86W56 976 aa12.47□□□□□ -0.41
VPS13A-204ENST00000376634 RBFAQ8N0V3 343 aa12.47□□□□□ -0.41
VPS13A-204ENST00000376634 UROC1Q96N76 676 aa12.47□□□□□ -0.41
VPS13A-204ENST00000376634 SEC14L3Q9UDX4 400 aa12.47□□□□□ -0.41
VPS13A-204ENST00000376634 ZNF510Q9Y2H8 683 aa12.47□□□□□ -0.41
VPS13A-204ENST00000376634 COMMD3-BMI1R4GMX3 469 aa12.47□□□□□ -0.41
VPS13A-204ENST00000376634 DEPDC5O75140 1603 aa12.47□□□□□ -0.41
VPS13A-204ENST00000376634 DHFRP00374 187 aa12.47□□□□□ -0.41
VPS13A-204ENST00000376634 FAM92BQ6ZTR7 304 aa12.47□□□□□ -0.41
VPS13A-204ENST00000376634 OAZ1P54368 228 aa12.47□□□□□ -0.41
VPS13A-204ENST00000376634 PSME3P61289 254 aa12.47□□□□□ -0.41
VPS13A-204ENST00000376634 PRKG2Q13237 762 aa12.47□□□□□ -0.41
VPS13A-204ENST00000376634 IL18R1Q13478 541 aa12.47□□□□□ -0.41
VPS13A-204ENST00000376634 CHST15Q7LFX5 561 aaPredicted RBP12.47□□□□□ -0.41
VPS13A-204ENST00000376634 NDNQ99608 321 aa12.47□□□□□ -0.41
VPS13A-204ENST00000376634 AASDHPPTQ9NRN7 309 aa12.47□□□□□ -0.41
VPS13A-204ENST00000376634 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.47□□□□□ -0.41
VPS13A-204ENST00000376634 SLC22A3O75751 556 aa12.47□□□□□ -0.41
VPS13A-204ENST00000376634 METTL18O95568 372 aa12.47□□□□□ -0.41
VPS13A-204ENST00000376634 CYB5AP00167 134 aa12.47□□□□□ -0.41
VPS13A-204ENST00000376634 TRBC1P01850 177 aa12.47□□□□□ -0.41
VPS13A-204ENST00000376634 ADRA1DP25100 572 aa12.47□□□□□ -0.41
VPS13A-204ENST00000376634 C1orf189Q5VU69 101 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms