RNA–Protein interactions for RNA: ENST00000376496.4

CLCN6-206, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 5 BASIC

Gene CLCN6, Length 2,922 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-206ENST00000376496 STX7O15400 261 aaKnown RBP12.6□□□□□ -0.39
CLCN6-206ENST00000376496 LPOP22079 712 aaPredicted RBP12.6□□□□□ -0.39
CLCN6-206ENST00000376496 PMLP29590 882 aa12.6□□□□□ -0.39
CLCN6-206ENST00000376496 MC4RP32245 332 aa12.6□□□□□ -0.39
CLCN6-206ENST00000376496 SLC12A1Q13621 1099 aa12.6□□□□□ -0.39
CLCN6-206ENST00000376496 ZRANB3Q5FWF4 1079 aa12.6□□□□□ -0.39
CLCN6-206ENST00000376496 C22orf39Q6P5X5 142 aa12.6□□□□□ -0.39
CLCN6-206ENST00000376496 SFTPA1Q8IWL2 248 aa12.6□□□□□ -0.39
CLCN6-206ENST00000376496 NPAS3Q8IXF0 933 aa12.6□□□□□ -0.39
CLCN6-206ENST00000376496 TMEM151AQ8N4L1 468 aa12.6□□□□□ -0.39
CLCN6-206ENST00000376496 OR2AP1Q8NGE2 309 aa12.6□□□□□ -0.39
CLCN6-206ENST00000376496 PRR11Q96HE9 360 aaPredicted RBP12.6□□□□□ -0.39
CLCN6-206ENST00000376496 GPR63Q9BZJ6 419 aa12.6□□□□□ -0.39
CLCN6-206ENST00000376496 CIPCQ9C0C6 399 aa12.6□□□□□ -0.39
CLCN6-206ENST00000376496 SLC28A3Q9HAS3 691 aa12.6□□□□□ -0.39
CLCN6-206ENST00000376496 ZDHHC4Q9NPG8 344 aa12.6□□□□□ -0.39
CLCN6-206ENST00000376496 DUS2Q9NX74 493 aaKnown RBP12.6□□□□□ -0.39
CLCN6-206ENST00000376496 XPR1Q9UBH6 696 aa12.6□□□□□ -0.39
CLCN6-206ENST00000376496 ZNF711Q9Y462 761 aa12.6□□□□□ -0.39
CLCN6-206ENST00000376496 TRAFD1O14545 582 aaPredicted RBP12.6□□□□□ -0.39
CLCN6-206ENST00000376496 ZNF197O14709 1029 aa12.6□□□□□ -0.39
CLCN6-206ENST00000376496 CLDN7O95471 211 aa12.6□□□□□ -0.39
CLCN6-206ENST00000376496 CYP17A1P05093 508 aa12.6□□□□□ -0.39
CLCN6-206ENST00000376496 PFKLP17858 780 aa12.6□□□□□ -0.39
CLCN6-206ENST00000376496 FMO4P31512 558 aa12.6□□□□□ -0.39
CLCN6-206ENST00000376496 OCRLQ01968 901 aa12.6□□□□□ -0.39
CLCN6-206ENST00000376496 DHCR24Q15392 516 aa12.6□□□□□ -0.39
CLCN6-206ENST00000376496 RNF43Q68DV7 783 aa12.6□□□□□ -0.39
CLCN6-206ENST00000376496 FGF13Q92913 245 aa12.6□□□□□ -0.39
CLCN6-206ENST00000376496 GPR78Q96P69 363 aa12.6□□□□□ -0.39
CLCN6-206ENST00000376496 KCNK13Q9HB14 408 aa12.6□□□□□ -0.39
CLCN6-206ENST00000376496 GPAMQ9HCL2 828 aa12.6□□□□□ -0.39
CLCN6-206ENST00000376496 GALPQ9UBC7 116 aa12.6□□□□□ -0.39
CLCN6-206ENST00000376496 TTC34A8MYJ7 566 aa12.59□□□□□ -0.39
CLCN6-206ENST00000376496 IGSF6O95976 241 aa12.59□□□□□ -0.39
CLCN6-206ENST00000376496 UGT2B4P06133 528 aa12.59□□□□□ -0.39
CLCN6-206ENST00000376496 CCDC166P0CW27 439 aa12.59□□□□□ -0.39
CLCN6-206ENST00000376496 RALBP11234 206 aa12.59□□□□□ -0.39
CLCN6-206ENST00000376496 CES1P23141 567 aa12.59□□□□□ -0.39
CLCN6-206ENST00000376496 HNF1BP35680 557 aa12.59□□□□□ -0.39
CLCN6-206ENST00000376496 CCNHP51946 323 aaPredicted RBP12.59□□□□□ -0.39
CLCN6-206ENST00000376496 AP1S1P61966 158 aa12.59□□□□□ -0.39
CLCN6-206ENST00000376496 TIAL1Q01085 375 aaKnown RBP eCLIP12.59□□□□□ -0.39
CLCN6-206ENST00000376496 PEX6Q13608 980 aa12.59□□□□□ -0.39
CLCN6-206ENST00000376496 INSCQ1MX18 579 aa12.59□□□□□ -0.39
CLCN6-206ENST00000376496 LRRC8EQ6NSJ5 796 aa12.59□□□□□ -0.39
CLCN6-206ENST00000376496 RFLNAQ6ZTI6 216 aa12.59□□□□□ -0.39
CLCN6-206ENST00000376496 KIAA0408Q6ZU52 694 aa12.59□□□□□ -0.39
CLCN6-206ENST00000376496 GRAMD1AQ96CP6 724 aa12.59□□□□□ -0.39
CLCN6-206ENST00000376496 TMEM120AQ9BXJ8 343 aa12.59□□□□□ -0.39
CLCN6-206ENST00000376496 TSR3Q9UJK0 312 aaKnown RBP12.59□□□□□ -0.39
CLCN6-206ENST00000376496 FAM50BQ9Y247 325 aa12.59□□□□□ -0.39
CLCN6-206ENST00000376496 VWA7Q9Y334 891 aa12.59□□□□□ -0.39
CLCN6-206ENST00000376496 C1orf232A0A0U1RR37 186 aa12.59□□□□□ -0.39
CLCN6-206ENST00000376496 BIRC5O15392 142 aa12.59□□□□□ -0.39
CLCN6-206ENST00000376496 TROVE2P10155 538 aaKnown RBP eCLIP12.59□□□□□ -0.39
CLCN6-206ENST00000376496 SLC6A11P48066 632 aa12.59□□□□□ -0.39
CLCN6-206ENST00000376496 SLC1A6P48664 564 aa12.59□□□□□ -0.39
CLCN6-206ENST00000376496 PLK1P53350 603 aa12.59□□□□□ -0.39
CLCN6-206ENST00000376496 ECT2LQ008S8 904 aa12.59□□□□□ -0.39
CLCN6-206ENST00000376496 HSF5Q4G112 596 aaPredicted RBP12.59□□□□□ -0.39
CLCN6-206ENST00000376496 ATG16L1Q676U5 607 aa12.59□□□□□ -0.39
CLCN6-206ENST00000376496 MRNIPQ6NTE8 343 aa12.59□□□□□ -0.39
CLCN6-206ENST00000376496 FAM151BQ6UXP7 276 aa12.59□□□□□ -0.39
CLCN6-206ENST00000376496 RPS27LQ71UM5 84 aaKnown RBP12.59□□□□□ -0.39
CLCN6-206ENST00000376496 TAS2R42Q7RTR8 314 aa12.59□□□□□ -0.39
CLCN6-206ENST00000376496 LEMD2Q8NC56 503 aa12.59□□□□□ -0.39
CLCN6-206ENST00000376496 TRIM55Q9BYV6 548 aa12.59□□□□□ -0.39
CLCN6-206ENST00000376496 MYLK2Q9H1R3 596 aa12.59□□□□□ -0.39
CLCN6-206ENST00000376496 ABCG8Q9H221 673 aa12.59□□□□□ -0.39
CLCN6-206ENST00000376496 IGSF5Q9NSI5 407 aa12.59□□□□□ -0.39
CLCN6-206ENST00000376496 PNPOQ9NVS9 261 aa12.59□□□□□ -0.39
CLCN6-206ENST00000376496 PRUNE2Q8WUY3 3088 aa12.59□□□□□ -0.39
CLCN6-206ENST00000376496 DLDP09622 509 aaKnown RBP12.58□□□□□ -0.39
CLCN6-206ENST00000376496 MYL2P10916 166 aa12.58□□□□□ -0.39
CLCN6-206ENST00000376496 CLCN5P51795 746 aa12.58□□□□□ -0.39
CLCN6-206ENST00000376496 STC1P52823 247 aa12.58□□□□□ -0.39
CLCN6-206ENST00000376496 POU4F1Q01851 419 aa12.58□□□□□ -0.39
CLCN6-206ENST00000376496 SLC14A2Q15849 920 aa12.58□□□□□ -0.39
CLCN6-206ENST00000376496 MYLK3Q32MK0 819 aa12.58□□□□□ -0.39
CLCN6-206ENST00000376496 EML3Q32P44 896 aa12.58□□□□□ -0.39
CLCN6-206ENST00000376496 CCDC153Q494R4 210 aa12.58□□□□□ -0.39
CLCN6-206ENST00000376496 EP400NLQ6ZTU2 488 aa12.58□□□□□ -0.39
CLCN6-206ENST00000376496 CELF5Q8N6W0 485 aaKnown RBP12.58□□□□□ -0.39
CLCN6-206ENST00000376496 ERP27Q96DN0 273 aa12.58□□□□□ -0.39
CLCN6-206ENST00000376496 CYP4F12Q9HCS2 524 aa12.58□□□□□ -0.39
CLCN6-206ENST00000376496 TBC1D14Q9P2M4 693 aa12.58□□□□□ -0.39
CLCN6-206ENST00000376496 SLC25A13Q9UJS0 675 aa12.58□□□□□ -0.39
CLCN6-206ENST00000376496 TRIM33Q9UPN9 1127 aa12.58□□□□□ -0.39
CLCN6-206ENST00000376496 DNAJC16Q9Y2G8 782 aa12.58□□□□□ -0.39
CLCN6-206ENST00000376496 NPIPB15A6NHN6 443 aaPredicted RBP12.58□□□□□ -0.4
CLCN6-206ENST00000376496 KLF11O14901 512 aa12.58□□□□□ -0.4
CLCN6-206ENST00000376496 SNNO75324 88 aaPredicted RBP12.58□□□□□ -0.4
CLCN6-206ENST00000376496 TBC1D1Q86TI0 1168 aaPredicted RBP12.58□□□□□ -0.4
CLCN6-206ENST00000376496 SPATS2Q86XZ4 545 aaKnown RBP12.58□□□□□ -0.4
CLCN6-206ENST00000376496 EXT2Q93063 718 aa12.58□□□□□ -0.4
CLCN6-206ENST00000376496 TSNARE1Q96NA8 513 aa12.58□□□□□ -0.4
CLCN6-206ENST00000376496 SAMD11Q96NU1 681 aa12.58□□□□□ -0.4
CLCN6-206ENST00000376496 ATP13A3Q9H7F0 1226 aa12.58□□□□□ -0.4
CLCN6-206ENST00000376496 HS3ST2Q9Y278 367 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms