RNA–Protein interactions for RNA: ENST00000374879.4

TMEFF1-201, Transcript of transmembrane protein with EGF like and two follistatin like domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEFF1, Length 2,611 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1-201ENST00000374879 SPC25Q9HBM1 224 aa20.61■□□□□ 0.89
TMEFF1-201ENST00000374879 LTB4R2Q9NPC1 389 aa20.61■□□□□ 0.89
TMEFF1-201ENST00000374879 DTLQ9NZJ0 730 aa20.61■□□□□ 0.89
TMEFF1-201ENST00000374879 SLC22A1O15245 554 aa20.61■□□□□ 0.89
TMEFF1-201ENST00000374879 TIMM44O43615 452 aa20.61■□□□□ 0.89
TMEFF1-201ENST00000374879 ICMTO60725 284 aa20.61■□□□□ 0.89
TMEFF1-201ENST00000374879 FCGR1AP12314 374 aa20.61■□□□□ 0.89
TMEFF1-201ENST00000374879 GPD2P43304 727 aa20.61■□□□□ 0.89
TMEFF1-201ENST00000374879 SLC38A6Q8IZM9 456 aa20.61■□□□□ 0.89
TMEFF1-201ENST00000374879 SMG8Q8ND04 991 aaKnown RBP20.61■□□□□ 0.89
TMEFF1-201ENST00000374879 REPS2Q8NFH8 660 aa20.61■□□□□ 0.89
TMEFF1-201ENST00000374879 GLMNQ92990 594 aa20.61■□□□□ 0.89
TMEFF1-201ENST00000374879 CDHR1Q96JP9 859 aa20.61■□□□□ 0.89
TMEFF1-201ENST00000374879 DACH2Q96NX9 599 aa20.61■□□□□ 0.89
TMEFF1-201ENST00000374879 CMTM6Q9NX76 183 aa20.61■□□□□ 0.89
TMEFF1-201ENST00000374879 ZCWPW2A0A1B0GU75 182 aa20.6■□□□□ 0.89
TMEFF1-201ENST00000374879 MAGP20916 626 aa20.6■□□□□ 0.89
TMEFF1-201ENST00000374879 YWHAQP27348 245 aa20.6■□□□□ 0.89
TMEFF1-201ENST00000374879 PPP5CP53041 499 aa20.6■□□□□ 0.89
TMEFF1-201ENST00000374879 PYCR3Q53H96 274 aa20.6■□□□□ 0.89
TMEFF1-201ENST00000374879 RPS27LQ71UM5 84 aaKnown RBP20.6■□□□□ 0.89
TMEFF1-201ENST00000374879 THAP5Q7Z6K1 395 aa20.6■□□□□ 0.89
TMEFF1-201ENST00000374879 ZBTB33Q86T24 672 aa20.6■□□□□ 0.89
TMEFF1-201ENST00000374879 TTC39CQ8N584 583 aa20.6■□□□□ 0.89
TMEFF1-201ENST00000374879 POC5Q8NA72 575 aa20.6■□□□□ 0.89
TMEFF1-201ENST00000374879 ROPN1LQ96C74 230 aa20.6■□□□□ 0.89
TMEFF1-201ENST00000374879 OR2B2Q9GZK3 357 aa20.6■□□□□ 0.89
TMEFF1-201ENST00000374879 XYLT2Q9H1B5 865 aa20.6■□□□□ 0.89
TMEFF1-201ENST00000374879 FBRSL1Q9HCM7 1045 aaKnown RBP20.6■□□□□ 0.89
TMEFF1-201ENST00000374879 GGA3Q9NZ52 723 aa20.6■□□□□ 0.89
TMEFF1-201ENST00000374879 ABCD2Q9UBJ2 740 aa20.6■□□□□ 0.89
TMEFF1-201ENST00000374879 MOSPD1Q9UJG1 213 aa20.6■□□□□ 0.89
TMEFF1-201ENST00000374879 ZNF214Q9UL59 606 aaPredicted RBP20.6■□□□□ 0.89
TMEFF1-201ENST00000374879 UGT2A1Q9Y4X1 527 aa20.6■□□□□ 0.89
TMEFF1-201ENST00000374879 N6AMT1Q9Y5N5 214 aa20.6■□□□□ 0.89
TMEFF1-201ENST00000374879 ZBBXA8MT70 800 aa20.6■□□□□ 0.89
TMEFF1-201ENST00000374879 CCRL2O00421 344 aa20.6■□□□□ 0.89
TMEFF1-201ENST00000374879 SUPT20HL2P0C7V6 817 aa20.6■□□□□ 0.89
TMEFF1-201ENST00000374879 KRT6CP48668 564 aa20.6■□□□□ 0.89
TMEFF1-201ENST00000374879 VBP1P61758 197 aa20.6■□□□□ 0.89
TMEFF1-201ENST00000374879 TFAMQ00059 246 aaKnown RBP20.6■□□□□ 0.89
TMEFF1-201ENST00000374879 SUPT20HL1Q3ZLR7 823 aa20.6■□□□□ 0.89
TMEFF1-201ENST00000374879 BRSK2Q8IWQ3 736 aa20.6■□□□□ 0.89
TMEFF1-201ENST00000374879 CENPLQ8N0S6 344 aaPredicted RBP20.6■□□□□ 0.89
TMEFF1-201ENST00000374879 ASCC1Q8N9N2 400 aaKnown RBP20.6■□□□□ 0.89
TMEFF1-201ENST00000374879 SPERTQ8NA61 448 aa20.6■□□□□ 0.89
TMEFF1-201ENST00000374879 FIG4Q92562 907 aa20.6■□□□□ 0.89
TMEFF1-201ENST00000374879 ZBED2Q9BTP6 218 aa20.6■□□□□ 0.89
TMEFF1-201ENST00000374879 EPS8L2Q9H6S3 715 aa20.6■□□□□ 0.89
TMEFF1-201ENST00000374879 MEAF6Q9HAF1 191 aa20.6■□□□□ 0.89
TMEFF1-201ENST00000374879 IARS2Q9NSE4 1012 aaKnown RBP20.6■□□□□ 0.89
TMEFF1-201ENST00000374879 ZNF639Q9UID6 485 aa20.6■□□□□ 0.89
TMEFF1-201ENST00000374879 ANGPTL3Q9Y5C1 460 aa20.6■□□□□ 0.89
TMEFF1-201ENST00000374879 V9GYQ6 96 aa20.6■□□□□ 0.89
TMEFF1-201ENST00000374879 COL11A1P12107 1806 aaPredicted RBP20.6■□□□□ 0.89
TMEFF1-201ENST00000374879 TTC34A8MYJ7 566 aa20.59■□□□□ 0.89
TMEFF1-201ENST00000374879 NDUFS2O75306 463 aa20.59■□□□□ 0.89
TMEFF1-201ENST00000374879 CCNKO75909 580 aa20.59■□□□□ 0.89
TMEFF1-201ENST00000374879 LDLRP01130 860 aa20.59■□□□□ 0.89
TMEFF1-201ENST00000374879 NTRK1P04629 796 aa20.59■□□□□ 0.89
TMEFF1-201ENST00000374879 GPIP06744 558 aa20.59■□□□□ 0.89
TMEFF1-201ENST00000374879 NCK1P16333 377 aa20.59■□□□□ 0.89
TMEFF1-201ENST00000374879 CYP3A5P20815 502 aa20.59■□□□□ 0.89
TMEFF1-201ENST00000374879 ZNF460Q14592 562 aa20.59■□□□□ 0.89
TMEFF1-201ENST00000374879 MEP1AQ16819 746 aa20.59■□□□□ 0.89
TMEFF1-201ENST00000374879 ANO4Q32M45 955 aa20.59■□□□□ 0.89
TMEFF1-201ENST00000374879 NBPF12Q5TAG4 269 aaPredicted RBP20.59■□□□□ 0.89
TMEFF1-201ENST00000374879 LACC1Q8IV20 430 aa20.59■□□□□ 0.89
TMEFF1-201ENST00000374879 TMEM130Q8N3G9 435 aa20.59■□□□□ 0.89
TMEFF1-201ENST00000374879 RHOXF1Q8NHV9 184 aa20.59■□□□□ 0.89
TMEFF1-201ENST00000374879 BTBD2Q9BX70 525 aa20.59■□□□□ 0.89
TMEFF1-201ENST00000374879 MIR1-1HGQ9H1L0 117 aa20.59■□□□□ 0.89
TMEFF1-201ENST00000374879 HPS4Q9NQG7 708 aa20.59■□□□□ 0.89
TMEFF1-201ENST00000374879 EIF2B3Q9NR50 452 aaKnown RBP20.59■□□□□ 0.89
TMEFF1-201ENST00000374879 C16orf96A6NNT2 1141 aa20.59■□□□□ 0.89
TMEFF1-201ENST00000374879 UPK1BO75841 260 aa20.59■□□□□ 0.89
TMEFF1-201ENST00000374879 PIGRP01833 764 aa20.59■□□□□ 0.89
TMEFF1-201ENST00000374879 SLC35E2BP0CK96 405 aa20.59■□□□□ 0.89
TMEFF1-201ENST00000374879 HSD17B1P14061 328 aa20.59■□□□□ 0.89
TMEFF1-201ENST00000374879 EIF2DP41214 584 aaKnown RBP20.59■□□□□ 0.89
TMEFF1-201ENST00000374879 HMGCS2P54868 508 aa20.59■□□□□ 0.89
TMEFF1-201ENST00000374879 STX1BP61266 288 aa20.59■□□□□ 0.89
TMEFF1-201ENST00000374879 SP2Q02086 613 aa20.59■□□□□ 0.89
TMEFF1-201ENST00000374879 USP10Q14694 798 aaKnown RBP20.59■□□□□ 0.89
TMEFF1-201ENST00000374879 DUOXA2Q1HG44 320 aa20.59■□□□□ 0.89
TMEFF1-201ENST00000374879 CEP78Q5JTW2 689 aa20.59■□□□□ 0.89
TMEFF1-201ENST00000374879 DESI1Q6ICB0 168 aa20.59■□□□□ 0.89
TMEFF1-201ENST00000374879 PAGE2Q7Z2X7 111 aa20.59■□□□□ 0.89
TMEFF1-201ENST00000374879 IFNEQ86WN2 208 aa20.59■□□□□ 0.89
TMEFF1-201ENST00000374879 C2orf40Q9H1Z8 148 aa20.59■□□□□ 0.89
TMEFF1-201ENST00000374879 SEPT10Q9P0V9 454 aa20.59■□□□□ 0.89
TMEFF1-201ENST00000374879 ANKRD6Q9Y2G4 727 aa20.59■□□□□ 0.89
TMEFF1-201ENST00000374879 PCDHGA8Q9Y5G5 932 aa20.59■□□□□ 0.89
TMEFF1-201ENST00000374879 ATP6AP2A0A1C7CYW4 349 aa20.58■□□□□ 0.89
TMEFF1-201ENST00000374879 NEMP2A6NFY4 417 aa20.58■□□□□ 0.89
TMEFF1-201ENST00000374879 SPATA31C2B4DYI2 1134 aa20.58■□□□□ 0.89
TMEFF1-201ENST00000374879 RAD51BO15315 384 aa20.58■□□□□ 0.89
TMEFF1-201ENST00000374879 NPHS1O60500 1241 aa20.58■□□□□ 0.89
TMEFF1-201ENST00000374879 ATP6AP2O75787 350 aa20.58■□□□□ 0.89
TMEFF1-201ENST00000374879 MFN2O95140 757 aa20.58■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms