RNA–Protein interactions for RNA: ENST00000374843.8

HLA-DMA-201, Transcript of major histocompatibility complex, class II, DM alpha, humanhuman

APPRIS P1 BASIC

Gene HLA-DMA, Length 1,123 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMA-201ENST00000374843 BPTFQ12830 3046 aa17.23■□□□□ 0.35
HLA-DMA-201ENST00000374843 CCDC78A2IDD5 438 aa17.23■□□□□ 0.35
HLA-DMA-201ENST00000374843 CXorf49A8MYA2 514 aaPredicted RBP17.23■□□□□ 0.35
HLA-DMA-201ENST00000374843 ADRB3P13945 408 aa17.23■□□□□ 0.35
HLA-DMA-201ENST00000374843 C5AR1P21730 350 aa17.23■□□□□ 0.35
HLA-DMA-201ENST00000374843 CD72P21854 359 aa17.23■□□□□ 0.35
HLA-DMA-201ENST00000374843 DRD3P35462 400 aa17.23■□□□□ 0.35
HLA-DMA-201ENST00000374843 NEK3P51956 506 aa17.23■□□□□ 0.35
HLA-DMA-201ENST00000374843 STC1P52823 247 aa17.23■□□□□ 0.35
HLA-DMA-201ENST00000374843 RPS14P62263 151 aaKnown RBP17.23■□□□□ 0.35
HLA-DMA-201ENST00000374843 CEP85LQ5SZL2 805 aa17.23■□□□□ 0.35
HLA-DMA-201ENST00000374843 LRRC66Q68CR7 880 aa17.23■□□□□ 0.35
HLA-DMA-201ENST00000374843 ERAP2Q6P179 960 aa17.23■□□□□ 0.35
HLA-DMA-201ENST00000374843 ERN2Q76MJ5 926 aaKnown RBP17.23■□□□□ 0.35
HLA-DMA-201ENST00000374843 TSPAN33Q86UF1 283 aa17.23■□□□□ 0.35
HLA-DMA-201ENST00000374843 RASSF3Q86WH2 238 aa17.23■□□□□ 0.35
HLA-DMA-201ENST00000374843 LRRC6Q86X45 466 aa17.23■□□□□ 0.35
HLA-DMA-201ENST00000374843 RAVER1Q8IY67 606 aaKnown RBP17.23■□□□□ 0.35
HLA-DMA-201ENST00000374843 OR4K2Q8NGD2 314 aa17.23■□□□□ 0.35
HLA-DMA-201ENST00000374843 OR13C4Q8NGS5 318 aa17.23■□□□□ 0.35
HLA-DMA-201ENST00000374843 EPS8L3Q8TE67 593 aaKnown RBP17.23■□□□□ 0.35
HLA-DMA-201ENST00000374843 SCG3Q8WXD2 468 aaKnown RBP17.23■□□□□ 0.35
HLA-DMA-201ENST00000374843 CDKL2Q92772 493 aa17.23■□□□□ 0.35
HLA-DMA-201ENST00000374843 NELL2Q99435 816 aa17.23■□□□□ 0.35
HLA-DMA-201ENST00000374843 PAFAH2Q99487 392 aa17.23■□□□□ 0.35
HLA-DMA-201ENST00000374843 FAM167BQ9BTA0 163 aa17.23■□□□□ 0.35
HLA-DMA-201ENST00000374843 C20orf96Q9NUD7 363 aaPredicted RBP17.23■□□□□ 0.35
HLA-DMA-201ENST00000374843 ZNF180Q9UJW8 692 aa17.23■□□□□ 0.35
HLA-DMA-201ENST00000374843 FBXL21Q9UKT6 434 aa17.23■□□□□ 0.35
HLA-DMA-201ENST00000374843 KANSL1LA0AUZ9 987 aa17.22■□□□□ 0.35
HLA-DMA-201ENST00000374843 H0Y858 1186 aa17.22■□□□□ 0.35
HLA-DMA-201ENST00000374843 RASGRF2O14827 1237 aa17.22■□□□□ 0.35
HLA-DMA-201ENST00000374843 STX7O15400 261 aaKnown RBP17.22■□□□□ 0.35
HLA-DMA-201ENST00000374843 CDH16O75309 829 aa17.22■□□□□ 0.35
HLA-DMA-201ENST00000374843 VAPBO95292 243 aa17.22■□□□□ 0.35
HLA-DMA-201ENST00000374843 ERVK-10P10266 1014 aa17.22■□□□□ 0.35
HLA-DMA-201ENST00000374843 XPAP23025 273 aaPredicted RBP17.22■□□□□ 0.35
HLA-DMA-201ENST00000374843 HADHAP40939 763 aa17.22■□□□□ 0.35
HLA-DMA-201ENST00000374843 P2RY2P41231 377 aa17.22■□□□□ 0.35
HLA-DMA-201ENST00000374843 ZBTB16Q05516 673 aa17.22■□□□□ 0.35
HLA-DMA-201ENST00000374843 ELP6Q0PNE2 266 aa17.22■□□□□ 0.35
HLA-DMA-201ENST00000374843 FZD5Q13467 585 aa17.22■□□□□ 0.35
HLA-DMA-201ENST00000374843 KRT71Q3SY84 523 aa17.22■□□□□ 0.35
HLA-DMA-201ENST00000374843 POM121L1PQ3SYA9 428 aa17.22■□□□□ 0.35
HLA-DMA-201ENST00000374843 PIP5KL1Q5T9C9 394 aa17.22■□□□□ 0.35
HLA-DMA-201ENST00000374843 AFTPHQ6ULP2 937 aa17.22■□□□□ 0.35
HLA-DMA-201ENST00000374843 GALNT7Q86SF2 657 aa17.22■□□□□ 0.35
HLA-DMA-201ENST00000374843 SLC26A11Q86WA9 606 aa17.22■□□□□ 0.35
HLA-DMA-201ENST00000374843 LMNTD2Q8IXW0 634 aa17.22■□□□□ 0.35
HLA-DMA-201ENST00000374843 CNPY4Q8N129 248 aa17.22■□□□□ 0.35
HLA-DMA-201ENST00000374843 GJD3Q8N144 294 aa17.22■□□□□ 0.35
HLA-DMA-201ENST00000374843 CBARPQ8N350 705 aaPredicted RBP17.22■□□□□ 0.35
HLA-DMA-201ENST00000374843 AADATQ8N5Z0 425 aa17.22■□□□□ 0.35
HLA-DMA-201ENST00000374843 DCAKDQ8WVC6 231 aa17.22■□□□□ 0.35
HLA-DMA-201ENST00000374843 MKRN2Q9H000 416 aaKnown RBP17.22■□□□□ 0.35
HLA-DMA-201ENST00000374843 DYRK4Q9NR20 520 aa17.22■□□□□ 0.35
HLA-DMA-201ENST00000374843 NSMCE4AQ9NXX6 385 aa17.22■□□□□ 0.35
HLA-DMA-201ENST00000374843 ZFATQ9P243 1243 aa17.22■□□□□ 0.35
HLA-DMA-201ENST00000374843 PSMC3IPQ9P2W1 217 aaPredicted RBP17.22■□□□□ 0.35
HLA-DMA-201ENST00000374843 SCML1Q9UN30 329 aa17.22■□□□□ 0.35
HLA-DMA-201ENST00000374843 PKP3Q9Y446 797 aa17.22■□□□□ 0.35
HLA-DMA-201ENST00000374843 CCDC162PA2VCL2 907 aa17.21■□□□□ 0.35
HLA-DMA-201ENST00000374843 PSMD11O00231 422 aa17.21■□□□□ 0.35
HLA-DMA-201ENST00000374843 MID1O15344 667 aa17.21■□□□□ 0.35
HLA-DMA-201ENST00000374843 AP1G1O43747 822 aa17.21■□□□□ 0.35
HLA-DMA-201ENST00000374843 OPA1O60313 960 aa17.21■□□□□ 0.35
HLA-DMA-201ENST00000374843 CLDN7O95471 211 aa17.21■□□□□ 0.35
HLA-DMA-201ENST00000374843 SLC4A1P02730 911 aa17.21■□□□□ 0.35
HLA-DMA-201ENST00000374843 C1SP09871 688 aa17.21■□□□□ 0.35
HLA-DMA-201ENST00000374843 MYZAPP0CAP1 466 aa17.21■□□□□ 0.35
HLA-DMA-201ENST00000374843 PTPN5P54829 565 aa17.21■□□□□ 0.35
HLA-DMA-201ENST00000374843 DCDC1P59894 354 aa17.21■□□□□ 0.35
HLA-DMA-201ENST00000374843 FAM193AP78312 1265 aa17.21■□□□□ 0.35
HLA-DMA-201ENST00000374843 PRAMEP78395 509 aa17.21■□□□□ 0.35
HLA-DMA-201ENST00000374843 CNTN1Q12860 1018 aa17.21■□□□□ 0.35
HLA-DMA-201ENST00000374843 PTPRCAPQ14761 206 aa17.21■□□□□ 0.35
HLA-DMA-201ENST00000374843 HSP90AA5PQ58FG0 334 aa17.21■□□□□ 0.35
HLA-DMA-201ENST00000374843 LRRC73Q5JTD7 316 aa17.21■□□□□ 0.35
HLA-DMA-201ENST00000374843 TEDDM1Q5T9Z0 273 aa17.21■□□□□ 0.35
HLA-DMA-201ENST00000374843 AGBL4Q5VU57 503 aa17.21■□□□□ 0.35
HLA-DMA-201ENST00000374843 ZDHHC20Q5W0Z9 365 aa17.21■□□□□ 0.35
HLA-DMA-201ENST00000374843 ADGRD1Q6QNK2 874 aa17.21■□□□□ 0.35
HLA-DMA-201ENST00000374843 Q6ZS52 159 aa17.21■□□□□ 0.35
HLA-DMA-201ENST00000374843 KIAA0408Q6ZU52 694 aa17.21■□□□□ 0.35
HLA-DMA-201ENST00000374843 TTC7BQ86TV6 843 aa17.21■□□□□ 0.35
HLA-DMA-201ENST00000374843 SIX5Q8N196 739 aa17.21■□□□□ 0.35
HLA-DMA-201ENST00000374843 PPM1NQ8N819 430 aa17.21■□□□□ 0.35
HLA-DMA-201ENST00000374843 GPR150Q8NGU9 434 aa17.21■□□□□ 0.35
HLA-DMA-201ENST00000374843 CALML6Q8TD86 181 aa17.21■□□□□ 0.35
HLA-DMA-201ENST00000374843 HDAC10Q969S8 669 aa17.21■□□□□ 0.35
HLA-DMA-201ENST00000374843 PGM2Q96G03 612 aa17.21■□□□□ 0.35
HLA-DMA-201ENST00000374843 CDKN2AIPNLQ96HQ2 116 aa17.21■□□□□ 0.35
HLA-DMA-201ENST00000374843 TBATAQ96M53 351 aa17.21■□□□□ 0.35
HLA-DMA-201ENST00000374843 CPNE1Q99829 537 aa17.21■□□□□ 0.35
HLA-DMA-201ENST00000374843 MCMBPQ9BTE3 642 aa17.21■□□□□ 0.35
HLA-DMA-201ENST00000374843 OSBPL6Q9BZF3 934 aa17.21■□□□□ 0.35
HLA-DMA-201ENST00000374843 TMBIM4Q9HC24 238 aa17.21■□□□□ 0.35
HLA-DMA-201ENST00000374843 IL1RAPL1Q9NZN1 696 aa17.21■□□□□ 0.35
HLA-DMA-201ENST00000374843 RGSL1A5PLK6 1076 aa17.2■□□□□ 0.34
HLA-DMA-201ENST00000374843 BUD23O43709 281 aaKnown RBP17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms