RNA–Protein interactions for RNA: ENST00000374730.2

USP48-202, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-202ENST00000374730 TMEM240Q5SV17 173 aa4.96□□□□□ -1.62
USP48-202ENST00000374730 CELF3Q5SZQ8 465 aaKnown RBP4.96□□□□□ -1.62
USP48-202ENST00000374730 ERMARDQ5T6L9 678 aa4.96□□□□□ -1.62
USP48-202ENST00000374730 TTC19Q6DKK2 380 aaPredicted RBP4.96□□□□□ -1.62
USP48-202ENST00000374730 MMS22LQ6ZRQ5 1243 aa4.96□□□□□ -1.62
USP48-202ENST00000374730 GRASPQ7Z6J2 395 aaPredicted RBP4.96□□□□□ -1.62
USP48-202ENST00000374730 TADA2BQ86TJ2 420 aa4.96□□□□□ -1.62
USP48-202ENST00000374730 ERO1BQ86YB8 467 aa4.96□□□□□ -1.62
USP48-202ENST00000374730 ADGRG5Q8IZF4 528 aa4.96□□□□□ -1.62
USP48-202ENST00000374730 NIPA2Q8N8Q9 360 aa4.96□□□□□ -1.62
USP48-202ENST00000374730 PDPRQ8NCN5 879 aa4.96□□□□□ -1.62
USP48-202ENST00000374730 TMEM35BQ8NCS4 154 aa4.96□□□□□ -1.62
USP48-202ENST00000374730 ZNF606Q8WXB4 792 aa4.96□□□□□ -1.62
USP48-202ENST00000374730 SNX19Q92543 992 aa4.96□□□□□ -1.62
USP48-202ENST00000374730 RBM41Q96IZ5 413 aaKnown RBP4.96□□□□□ -1.62
USP48-202ENST00000374730 UROC1Q96N76 676 aa4.96□□□□□ -1.62
USP48-202ENST00000374730 SERPINB12Q96P63 405 aa4.96□□□□□ -1.62
USP48-202ENST00000374730 CCT8L2Q96SF2 557 aa4.96□□□□□ -1.62
USP48-202ENST00000374730 SMAD5Q99717 465 aaKnown RBP4.96□□□□□ -1.62
USP48-202ENST00000374730 ARPC5LQ9BPX5 153 aa4.96□□□□□ -1.62
USP48-202ENST00000374730 HERPUD2Q9BSE4 406 aa4.96□□□□□ -1.62
USP48-202ENST00000374730 NFKBIZQ9BYH8 718 aa4.96□□□□□ -1.62
USP48-202ENST00000374730 OSBPL8Q9BZF1 889 aa4.96□□□□□ -1.62
USP48-202ENST00000374730 TRIM7Q9C029 511 aa4.96□□□□□ -1.62
USP48-202ENST00000374730 CDC42EP4Q9H3Q1 356 aaKnown RBP4.96□□□□□ -1.62
USP48-202ENST00000374730 CENPHQ9H3R5 247 aa4.96□□□□□ -1.62
USP48-202ENST00000374730 FZD8Q9H461 694 aa4.96□□□□□ -1.62
USP48-202ENST00000374730 MROH8Q9H579 483 aa4.96□□□□□ -1.62
USP48-202ENST00000374730 CCDC134Q9H6E4 229 aa4.96□□□□□ -1.62
USP48-202ENST00000374730 PTPRHQ9HD43 1115 aa4.96□□□□□ -1.62
USP48-202ENST00000374730 OBP2AQ9NY56 170 aa4.96□□□□□ -1.62
USP48-202ENST00000374730 AGTPBP1Q9UPW5 1226 aa4.96□□□□□ -1.62
USP48-202ENST00000374730 TNFRSF18Q9Y5U5 241 aa4.96□□□□□ -1.62
USP48-202ENST00000374730 COL1A2P08123 1366 aa4.95□□□□□ -1.62
USP48-202ENST00000374730 FAM170AA1A519 330 aa4.95□□□□□ -1.62
USP48-202ENST00000374730 NT5C1B-RDH14C9J2C7 533 aa4.95□□□□□ -1.62
USP48-202ENST00000374730 ADM5C9JUS6 153 aa4.95□□□□□ -1.62
USP48-202ENST00000374730 E7EVH7 732 aa4.95□□□□□ -1.62
USP48-202ENST00000374730 RASGRF2O14827 1237 aa4.95□□□□□ -1.62
USP48-202ENST00000374730 HBP1O60381 514 aa4.95□□□□□ -1.62
USP48-202ENST00000374730 KIAA0754O94854 1291 aa4.95□□□□□ -1.62
USP48-202ENST00000374730 MATN4O95460 622 aa4.95□□□□□ -1.62
USP48-202ENST00000374730 TNNC2P02585 160 aa4.95□□□□□ -1.62
USP48-202ENST00000374730 SHBGP04278 402 aa4.95□□□□□ -1.62
USP48-202ENST00000374730 ABHD2P08910 425 aa4.95□□□□□ -1.62
USP48-202ENST00000374730 FTH1P19P0C7X4 201 aa4.95□□□□□ -1.62
USP48-202ENST00000374730 RALAP11233 206 aa4.95□□□□□ -1.62
USP48-202ENST00000374730 HARSP12081 509 aaKnown RBP4.95□□□□□ -1.62
USP48-202ENST00000374730 ZNF37AP17032 561 aaPredicted RBP4.95□□□□□ -1.62
USP48-202ENST00000374730 MALP21145 153 aa4.95□□□□□ -1.62
USP48-202ENST00000374730 KLRC2P26717 231 aa4.95□□□□□ -1.62
USP48-202ENST00000374730 ATP5DP30049 168 aa4.95□□□□□ -1.62
USP48-202ENST00000374730 TNFSF9P41273 254 aa4.95□□□□□ -1.62
USP48-202ENST00000374730 IL12RB1P42701 662 aa4.95□□□□□ -1.62
USP48-202ENST00000374730 ITGA8P53708 1063 aa4.95□□□□□ -1.62
USP48-202ENST00000374730 MYL6P60660 151 aa4.95□□□□□ -1.62
USP48-202ENST00000374730 DSC2Q02487 901 aa4.95□□□□□ -1.62
USP48-202ENST00000374730 MBTD1Q05BQ5 628 aa4.95□□□□□ -1.62
USP48-202ENST00000374730 TRPC3Q13507 836 aa4.95□□□□□ -1.62
USP48-202ENST00000374730 PIGHQ14442 188 aaPredicted RBP4.95□□□□□ -1.62
USP48-202ENST00000374730 PTPRRQ15256 657 aa4.95□□□□□ -1.62
USP48-202ENST00000374730 FAM187BQ17R55 369 aa4.95□□□□□ -1.62
USP48-202ENST00000374730 ZNF699Q32M78 642 aa4.95□□□□□ -1.62
USP48-202ENST00000374730 PREPLQ4J6C6 727 aaPredicted RBP4.95□□□□□ -1.62
USP48-202ENST00000374730 ODF2Q5BJF6 829 aa4.95□□□□□ -1.62
USP48-202ENST00000374730 ZNF484Q5JVG2 852 aa4.95□□□□□ -1.62
USP48-202ENST00000374730 DNAJC24Q6P3W2 148 aa4.95□□□□□ -1.62
USP48-202ENST00000374730 C6orf89Q6UWU4 347 aa4.95□□□□□ -1.62
USP48-202ENST00000374730 TAOK1Q7L7X3 1001 aa4.95□□□□□ -1.62
USP48-202ENST00000374730 FASTKD5Q7L8L6 764 aaKnown RBP4.95□□□□□ -1.62
USP48-202ENST00000374730 CCDC50Q8IVM0 306 aa4.95□□□□□ -1.62
USP48-202ENST00000374730 C10orf67Q8IYJ2 551 aa4.95□□□□□ -1.62
USP48-202ENST00000374730 RCOR2Q8IZ40 523 aa4.95□□□□□ -1.62
USP48-202ENST00000374730 RIBC1Q8N443 379 aaPredicted RBP4.95□□□□□ -1.62
USP48-202ENST00000374730 CCDC89Q8N998 374 aa4.95□□□□□ -1.62
USP48-202ENST00000374730 RNF149Q8NC42 400 aa4.95□□□□□ -1.62
USP48-202ENST00000374730 IPO4Q8TEX9 1081 aaKnown RBP4.95□□□□□ -1.62
USP48-202ENST00000374730 C1orf54Q8WWF1 131 aa4.95□□□□□ -1.62
USP48-202ENST00000374730 JPH3Q8WXH2 748 aaPredicted RBP4.95□□□□□ -1.62
USP48-202ENST00000374730 RAPGEF5Q92565 580 aa4.95□□□□□ -1.62
USP48-202ENST00000374730 P3H4Q92791 437 aa4.95□□□□□ -1.62
USP48-202ENST00000374730 SCAMP4Q969E2 229 aa4.95□□□□□ -1.62
USP48-202ENST00000374730 DCPSQ96C86 337 aaKnown RBP4.95□□□□□ -1.62
USP48-202ENST00000374730 ANKRD36BP1Q96IX9 119 aa4.95□□□□□ -1.62
USP48-202ENST00000374730 SLITRK1Q96PX8 696 aa4.95□□□□□ -1.62
USP48-202ENST00000374730 XPO6Q96QU8 1125 aaKnown RBP4.95□□□□□ -1.62
USP48-202ENST00000374730 TIMP4Q99727 224 aa4.95□□□□□ -1.62
USP48-202ENST00000374730 SARGQ9BW04 601 aa4.95□□□□□ -1.62
USP48-202ENST00000374730 FRMD8P1Q9BZ68 369 aaPredicted RBP4.95□□□□□ -1.62
USP48-202ENST00000374730 MTMR12Q9C0I1 747 aa4.95□□□□□ -1.62
USP48-202ENST00000374730 CDT1Q9H211 546 aa4.95□□□□□ -1.62
USP48-202ENST00000374730 LHX5Q9H2C1 402 aa4.95□□□□□ -1.62
USP48-202ENST00000374730 KLK15Q9H2R5 256 aa4.95□□□□□ -1.62
USP48-202ENST00000374730 SMARCAD1Q9H4L7 1026 aa4.95□□□□□ -1.62
USP48-202ENST00000374730 FAM124BQ9H5Z6 455 aaPredicted RBP4.95□□□□□ -1.62
USP48-202ENST00000374730 CISHQ9NSE2 258 aa4.95□□□□□ -1.62
USP48-202ENST00000374730 PRMT7Q9NVM4 692 aaPredicted RBP4.95□□□□□ -1.62
USP48-202ENST00000374730 ASIC3Q9UHC3 531 aa4.95□□□□□ -1.62
USP48-202ENST00000374730 LGALS13Q9UHV8 139 aa4.95□□□□□ -1.62
USP48-202ENST00000374730 SLC45A2Q9UMX9 530 aa4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms