RNA–Protein interactions for RNA: ENST00000374429.6

CXCL12-203, Transcript of C-X-C motif chemokine ligand 12, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CXCL12, Length 3,532 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-203ENST00000374429 SNRNP27Q8WVK2 155 aaKnown RBP10.83□□□□□ -0.68
CXCL12-203ENST00000374429 KCNN1Q92952 543 aa10.83□□□□□ -0.68
CXCL12-203ENST00000374429 ASIC4Q96FT7 647 aa10.83□□□□□ -0.68
CXCL12-203ENST00000374429 STOML1Q9UBI4 398 aa10.83□□□□□ -0.68
CXCL12-203ENST00000374429 RNF112Q9ULX5 631 aa10.83□□□□□ -0.68
CXCL12-203ENST00000374429 BRWD1Q9NSI6 2320 aa10.83□□□□□ -0.68
CXCL12-203ENST00000374429 HEATR9A2RTY3 570 aa10.83□□□□□ -0.68
CXCL12-203ENST00000374429 UPK3BL1B0FP48 263 aa10.83□□□□□ -0.68
CXCL12-203ENST00000374429 UPK3BL2E5RIL1 263 aa10.83□□□□□ -0.68
CXCL12-203ENST00000374429 G3V2L1 256 aa10.83□□□□□ -0.68
CXCL12-203ENST00000374429 M0QZQ0 153 aa10.83□□□□□ -0.68
CXCL12-203ENST00000374429 CCL16O15467 120 aa10.83□□□□□ -0.68
CXCL12-203ENST00000374429 COX4I1P13073 169 aa10.83□□□□□ -0.68
CXCL12-203ENST00000374429 ARNTP27540 789 aa10.83□□□□□ -0.68
CXCL12-203ENST00000374429 GDF5P43026 501 aa10.83□□□□□ -0.68
CXCL12-203ENST00000374429 KLF10Q13118 480 aa10.83□□□□□ -0.68
CXCL12-203ENST00000374429 BFSP2Q13515 415 aa10.83□□□□□ -0.68
CXCL12-203ENST00000374429 TSNQ15631 228 aaKnown RBP10.83□□□□□ -0.68
CXCL12-203ENST00000374429 CCNJLQ8IV13 435 aa10.83□□□□□ -0.68
CXCL12-203ENST00000374429 CCDC117Q8IWD4 279 aaPredicted RBP10.83□□□□□ -0.68
CXCL12-203ENST00000374429 SIDT2Q8NBJ9 832 aaKnown RBP10.83□□□□□ -0.68
CXCL12-203ENST00000374429 SORCS1Q8WY21 1168 aa10.83□□□□□ -0.68
CXCL12-203ENST00000374429 GPR21Q99679 349 aa10.83□□□□□ -0.68
CXCL12-203ENST00000374429 CDH19Q9H159 772 aa10.83□□□□□ -0.68
CXCL12-203ENST00000374429 EBF2Q9HAK2 575 aa10.83□□□□□ -0.68
CXCL12-203ENST00000374429 CSNK1G1Q9HCP0 422 aa10.83□□□□□ -0.68
CXCL12-203ENST00000374429 THEGQ9P2T0 379 aa10.83□□□□□ -0.68
CXCL12-203ENST00000374429 DNMT3LQ9UJW3 386 aa10.83□□□□□ -0.68
CXCL12-203ENST00000374429 SPO11Q9Y5K1 396 aa10.83□□□□□ -0.68
CXCL12-203ENST00000374429 CDC7O00311 574 aa10.82□□□□□ -0.68
CXCL12-203ENST00000374429 SCAMP1O15126 338 aa10.82□□□□□ -0.68
CXCL12-203ENST00000374429 INSIG1O15503 277 aa10.82□□□□□ -0.68
CXCL12-203ENST00000374429 SKIP12755 728 aa10.82□□□□□ -0.68
CXCL12-203ENST00000374429 ATP6V1B1P15313 513 aa10.82□□□□□ -0.68
CXCL12-203ENST00000374429 RAG1P15918 1043 aa10.82□□□□□ -0.68
CXCL12-203ENST00000374429 FUT4P22083 530 aa10.82□□□□□ -0.68
CXCL12-203ENST00000374429 NRG1Q02297 640 aaPredicted RBP10.82□□□□□ -0.68
CXCL12-203ENST00000374429 GNA12Q03113 381 aa10.82□□□□□ -0.68
CXCL12-203ENST00000374429 VEPH1Q14D04 833 aa10.82□□□□□ -0.68
CXCL12-203ENST00000374429 BRMS1LQ5PSV4 323 aa10.82□□□□□ -0.68
CXCL12-203ENST00000374429 DENND5AQ6IQ26 1287 aa10.82□□□□□ -0.68
CXCL12-203ENST00000374429 MRPL10Q7Z7H8 261 aaKnown RBP10.82□□□□□ -0.68
CXCL12-203ENST00000374429 HS6ST3Q8IZP7 471 aa10.82□□□□□ -0.68
CXCL12-203ENST00000374429 MIER2Q8N344 545 aa10.82□□□□□ -0.68
CXCL12-203ENST00000374429 C7orf26Q96N11 449 aa10.82□□□□□ -0.68
CXCL12-203ENST00000374429 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.82□□□□□ -0.68
CXCL12-203ENST00000374429 PNPLA8Q9NP80 782 aa10.82□□□□□ -0.68
CXCL12-203ENST00000374429 TMEM161AQ9NX61 479 aa10.82□□□□□ -0.68
CXCL12-203ENST00000374429 TLR6Q9Y2C9 796 aa10.82□□□□□ -0.68
CXCL12-203ENST00000374429 CPQQ9Y646 472 aa10.82□□□□□ -0.68
CXCL12-203ENST00000374429 ARHGEF37A1IGU5 675 aa10.82□□□□□ -0.68
CXCL12-203ENST00000374429 NPEPPSL1A6NEC2 478 aa10.82□□□□□ -0.68
CXCL12-203ENST00000374429 PRAMEF12O95522 483 aa10.82□□□□□ -0.68
CXCL12-203ENST00000374429 GRK2P25098 689 aa10.82□□□□□ -0.68
CXCL12-203ENST00000374429 DSC3Q14574 896 aa10.82□□□□□ -0.68
CXCL12-203ENST00000374429 UGP2Q16851 508 aa10.82□□□□□ -0.68
CXCL12-203ENST00000374429 SLC44A4Q53GD3 710 aa10.82□□□□□ -0.68
CXCL12-203ENST00000374429 PAOXQ6QHF9 649 aa10.82□□□□□ -0.68
CXCL12-203ENST00000374429 LRRC74BQ6ZQY2 392 aa10.82□□□□□ -0.68
CXCL12-203ENST00000374429 CDYL2Q8N8U2 506 aa10.82□□□□□ -0.68
CXCL12-203ENST00000374429 MRPL46Q9H2W6 279 aaKnown RBP10.82□□□□□ -0.68
CXCL12-203ENST00000374429 CYLDQ9NQC7 956 aa10.82□□□□□ -0.68
CXCL12-203ENST00000374429 AGO1Q9UL18 857 aaKnown RBP10.82□□□□□ -0.68
CXCL12-203ENST00000374429 FGF10O15520 208 aaPredicted RBP10.81□□□□□ -0.68
CXCL12-203ENST00000374429 RFPL2O75678 378 aa10.81□□□□□ -0.68
CXCL12-203ENST00000374429 ALDH1A1P00352 501 aa10.81□□□□□ -0.68
CXCL12-203ENST00000374429 GSRP00390 522 aa10.81□□□□□ -0.68
CXCL12-203ENST00000374429 PIK3R1P27986 724 aa10.81□□□□□ -0.68
CXCL12-203ENST00000374429 DDX39BQ13838 428 aaKnown RBP10.81□□□□□ -0.68
CXCL12-203ENST00000374429 CYLC2Q14093 348 aaPredicted RBP10.81□□□□□ -0.68
CXCL12-203ENST00000374429 FLOT2Q14254 428 aa10.81□□□□□ -0.68
CXCL12-203ENST00000374429 TSTD2Q5T7W7 516 aa10.81□□□□□ -0.68
CXCL12-203ENST00000374429 AGAP9Q5VTM2 703 aa10.81□□□□□ -0.68
CXCL12-203ENST00000374429 FRA10AC1Q70Z53 315 aa10.81□□□□□ -0.68
CXCL12-203ENST00000374429 SPRED2Q7Z698 418 aa10.81□□□□□ -0.68
CXCL12-203ENST00000374429 DNAJB7Q7Z6W7 309 aaPredicted RBP10.81□□□□□ -0.68
CXCL12-203ENST00000374429 PTCD3Q96EY7 689 aaKnown RBP10.81□□□□□ -0.68
CXCL12-203ENST00000374429 FCRL5Q96RD9 977 aa10.81□□□□□ -0.68
CXCL12-203ENST00000374429 HAPLN3Q96S86 360 aa10.81□□□□□ -0.68
CXCL12-203ENST00000374429 VAT1Q99536 393 aa10.81□□□□□ -0.68
CXCL12-203ENST00000374429 CIPCQ9C0C6 399 aa10.81□□□□□ -0.68
CXCL12-203ENST00000374429 DCLRE1BQ9H816 532 aa10.81□□□□□ -0.68
CXCL12-203ENST00000374429 PFDN4Q9NQP4 134 aa10.81□□□□□ -0.68
CXCL12-203ENST00000374429 RRN3Q9NYV6 651 aa10.81□□□□□ -0.68
CXCL12-203ENST00000374429 SNX2O60749 519 aa10.81□□□□□ -0.68
CXCL12-203ENST00000374429 SERPINA6P08185 405 aa10.81□□□□□ -0.68
CXCL12-203ENST00000374429 SEMA3AQ14563 771 aa10.81□□□□□ -0.68
CXCL12-203ENST00000374429 USP41Q3LFD5 358 aa10.81□□□□□ -0.68
CXCL12-203ENST00000374429 CCDC153Q494R4 210 aa10.81□□□□□ -0.68
CXCL12-203ENST00000374429 LIPMQ5VYY2 423 aa10.81□□□□□ -0.68
CXCL12-203ENST00000374429 PTRHD1Q6GMV3 140 aaKnown RBP10.81□□□□□ -0.68
CXCL12-203ENST00000374429 IYDQ6PHW0 289 aa10.81□□□□□ -0.68
CXCL12-203ENST00000374429 AMIGO2Q86SJ2 522 aa10.81□□□□□ -0.68
CXCL12-203ENST00000374429 CPNE9Q8IYJ1 553 aa10.81□□□□□ -0.68
CXCL12-203ENST00000374429 CMTM8Q8IZV2 173 aa10.81□□□□□ -0.68
CXCL12-203ENST00000374429 LMNTD1Q8N9Z9 388 aa10.81□□□□□ -0.68
CXCL12-203ENST00000374429 CLHC1Q8NHS4 586 aa10.81□□□□□ -0.68
CXCL12-203ENST00000374429 DNAJB14Q8TBM8 379 aa10.81□□□□□ -0.68
CXCL12-203ENST00000374429 GFM2Q969S9 779 aaKnown RBP10.81□□□□□ -0.68
CXCL12-203ENST00000374429 CMTM5Q96DZ9 223 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms