RNA–Protein interactions for RNA: ENST00000374253.9

CNKSR1-202, Transcript of connector enhancer of kinase suppressor of Ras 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CNKSR1, Length 2,538 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1-202ENST00000374253 CARNMT1Q8N4J0 409 aa15.99■□□□□ 0.15
CNKSR1-202ENST00000374253 OR6K2Q8NGY2 324 aa15.99■□□□□ 0.15
CNKSR1-202ENST00000374253 C2orf15Q8WU43 125 aaKnown RBP15.99■□□□□ 0.15
CNKSR1-202ENST00000374253 PSKH2Q96QS6 385 aa15.99■□□□□ 0.15
CNKSR1-202ENST00000374253 YIPF1Q9Y548 306 aa15.99■□□□□ 0.15
CNKSR1-202ENST00000374253 C5orf42Q9H799 3197 aa15.99■□□□□ 0.15
CNKSR1-202ENST00000374253 C1RP00736 705 aa15.99■□□□□ 0.15
CNKSR1-202ENST00000374253 PRLP01236 227 aa15.99■□□□□ 0.15
CNKSR1-202ENST00000374253 ATP6V1C1P21283 382 aa15.99■□□□□ 0.15
CNKSR1-202ENST00000374253 SP100P23497 879 aaPredicted RBP15.99■□□□□ 0.15
CNKSR1-202ENST00000374253 TLE2Q04725 743 aa15.99■□□□□ 0.15
CNKSR1-202ENST00000374253 TNK2Q07912 1038 aa15.99■□□□□ 0.15
CNKSR1-202ENST00000374253 TWF1Q12792 350 aa15.99■□□□□ 0.15
CNKSR1-202ENST00000374253 CYLC2Q14093 348 aaPredicted RBP15.99■□□□□ 0.15
CNKSR1-202ENST00000374253 TRIM60Q495X7 471 aa15.99■□□□□ 0.15
CNKSR1-202ENST00000374253 MRNIPQ6NTE8 343 aa15.99■□□□□ 0.15
CNKSR1-202ENST00000374253 PGM2L1Q6PCE3 622 aa15.99■□□□□ 0.15
CNKSR1-202ENST00000374253 RNF111Q6ZNA4 994 aa15.99■□□□□ 0.15
CNKSR1-202ENST00000374253 PLCD3Q8N3E9 789 aa15.99■□□□□ 0.15
CNKSR1-202ENST00000374253 ZNF461Q8TAF7 563 aa15.99■□□□□ 0.15
CNKSR1-202ENST00000374253 GABPB2Q8TAK5 448 aaPredicted RBP15.99■□□□□ 0.15
CNKSR1-202ENST00000374253 RTKNQ9BST9 563 aa15.99■□□□□ 0.15
CNKSR1-202ENST00000374253 GALPQ9UBC7 116 aa15.99■□□□□ 0.15
CNKSR1-202ENST00000374253 VTI1BQ9UEU0 232 aa15.99■□□□□ 0.15
CNKSR1-202ENST00000374253 GIMAP2Q9UG22 337 aa15.99■□□□□ 0.15
CNKSR1-202ENST00000374253 CHD5Q8TDI0 1954 aa15.98■□□□□ 0.15
CNKSR1-202ENST00000374253 RGSL1A5PLK6 1076 aa15.98■□□□□ 0.15
CNKSR1-202ENST00000374253 PRRG1O14668 218 aa15.98■□□□□ 0.15
CNKSR1-202ENST00000374253 KDELR3O43731 214 aa15.98■□□□□ 0.15
CNKSR1-202ENST00000374253 RBP1P09455 135 aa15.98■□□□□ 0.15
CNKSR1-202ENST00000374253 MBL2P11226 248 aaPredicted RBP15.98■□□□□ 0.15
CNKSR1-202ENST00000374253 ALDH1A3P47895 512 aa15.98■□□□□ 0.15
CNKSR1-202ENST00000374253 AP2B1P63010 937 aa15.98■□□□□ 0.15
CNKSR1-202ENST00000374253 ARF5P84085 180 aa15.98■□□□□ 0.15
CNKSR1-202ENST00000374253 DSELQ8IZU8 1212 aa15.98■□□□□ 0.15
CNKSR1-202ENST00000374253 BBS5Q8N3I7 341 aa15.98■□□□□ 0.15
CNKSR1-202ENST00000374253 FBXW8Q8N3Y1 598 aa15.98■□□□□ 0.15
CNKSR1-202ENST00000374253 UCMAQ8WVF2 138 aa15.98■□□□□ 0.15
CNKSR1-202ENST00000374253 CNDP1Q96KN2 507 aa15.98■□□□□ 0.15
CNKSR1-202ENST00000374253 NSUN5Q96P11 429 aaKnown RBP15.98■□□□□ 0.15
CNKSR1-202ENST00000374253 CDRT15Q96T59 188 aa15.98■□□□□ 0.15
CNKSR1-202ENST00000374253 GSTO2Q9H4Y5 243 aa15.98■□□□□ 0.15
CNKSR1-202ENST00000374253 NDE1Q9NXR1 346 aa15.98■□□□□ 0.15
CNKSR1-202ENST00000374253 IKZF3Q9UKT9 509 aa15.98■□□□□ 0.15
CNKSR1-202ENST00000374253 RAI2Q9Y5P3 530 aa15.98■□□□□ 0.15
CNKSR1-202ENST00000374253 NCF1BA6NI72 391 aaPredicted RBP15.98■□□□□ 0.15
CNKSR1-202ENST00000374253 NCF1CA8MVU1 366 aaPredicted RBP15.98■□□□□ 0.15
CNKSR1-202ENST00000374253 OR1I1O60431 355 aa15.98■□□□□ 0.15
CNKSR1-202ENST00000374253 CCNT2O60583 730 aaKnown RBP15.98■□□□□ 0.15
CNKSR1-202ENST00000374253 CLDN11O75508 207 aa15.98■□□□□ 0.15
CNKSR1-202ENST00000374253 THRAP10827 490 aa15.98■□□□□ 0.15
CNKSR1-202ENST00000374253 NCF1P14598 390 aaPredicted RBP15.98■□□□□ 0.15
CNKSR1-202ENST00000374253 CD1DP15813 335 aa15.98■□□□□ 0.15
CNKSR1-202ENST00000374253 TCN1P20061 433 aaPredicted RBP15.98■□□□□ 0.15
CNKSR1-202ENST00000374253 FDXRP22570 491 aa15.98■□□□□ 0.15
CNKSR1-202ENST00000374253 DNAJB13P59910 316 aa15.98■□□□□ 0.15
CNKSR1-202ENST00000374253 ZXDBP98169 803 aa15.98■□□□□ 0.15
CNKSR1-202ENST00000374253 PDAP1Q13442 181 aaKnown RBP15.98■□□□□ 0.15
CNKSR1-202ENST00000374253 PFKFB4Q16877 469 aa15.98■□□□□ 0.15
CNKSR1-202ENST00000374253 ADGRF1Q5T601 910 aa15.98■□□□□ 0.15
CNKSR1-202ENST00000374253 ATXN7L2Q5T6C5 722 aaPredicted RBP15.98■□□□□ 0.15
CNKSR1-202ENST00000374253 TXNDC8Q6A555 127 aa15.98■□□□□ 0.15
CNKSR1-202ENST00000374253 ANO7Q6IWH7 933 aa15.98■□□□□ 0.15
CNKSR1-202ENST00000374253 CXorf57Q6NSI4 855 aaKnown RBP15.98■□□□□ 0.15
CNKSR1-202ENST00000374253 FAM45BPQ6NSW5 357 aa15.98■□□□□ 0.15
CNKSR1-202ENST00000374253 FAM45AQ8TCE6 357 aa15.98■□□□□ 0.15
CNKSR1-202ENST00000374253 TMA16Q96EY4 203 aaKnown RBP15.98■□□□□ 0.15
CNKSR1-202ENST00000374253 FBRSL1Q9HCM7 1045 aaKnown RBP15.98■□□□□ 0.15
CNKSR1-202ENST00000374253 POLR3BQ9NW08 1133 aaPredicted RBP15.98■□□□□ 0.15
CNKSR1-202ENST00000374253 PLK2Q9NYY3 685 aa15.98■□□□□ 0.15
CNKSR1-202ENST00000374253 AFF4Q9UHB7 1163 aaKnown RBP15.98■□□□□ 0.15
CNKSR1-202ENST00000374253 FCF1Q9Y324 198 aaKnown RBP15.98■□□□□ 0.15
CNKSR1-202ENST00000374253 TBL1XO60907 577 aa15.97■□□□□ 0.15
CNKSR1-202ENST00000374253 DPP6P42658 865 aa15.97■□□□□ 0.15
CNKSR1-202ENST00000374253 STC1P52823 247 aa15.97■□□□□ 0.15
CNKSR1-202ENST00000374253 SMAD3P84022 425 aaKnown RBP15.97■□□□□ 0.15
CNKSR1-202ENST00000374253 ACVR1Q04771 509 aa15.97■□□□□ 0.15
CNKSR1-202ENST00000374253 SLC14A2Q15849 920 aa15.97■□□□□ 0.15
CNKSR1-202ENST00000374253 C5orf22Q49AR2 442 aa15.97■□□□□ 0.15
CNKSR1-202ENST00000374253 PAQR3Q6TCH7 311 aa15.97■□□□□ 0.15
CNKSR1-202ENST00000374253 PIANPQ8IYJ0 282 aa15.97■□□□□ 0.15
CNKSR1-202ENST00000374253 PTGR2Q8N8N7 351 aaPredicted RBP15.97■□□□□ 0.15
CNKSR1-202ENST00000374253 FAM156AQ8NDB6 213 aa15.97■□□□□ 0.15
CNKSR1-202ENST00000374253 WFDC5Q8TCV5 224 aa15.97■□□□□ 0.15
CNKSR1-202ENST00000374253 TDRD1Q9BXT4 1180 aaKnown RBP15.97■□□□□ 0.15
CNKSR1-202ENST00000374253 ZNF385DQ9H6B1 395 aa15.97■□□□□ 0.15
CNKSR1-202ENST00000374253 S100A14Q9HCY8 104 aa15.97■□□□□ 0.15
CNKSR1-202ENST00000374253 COMMD8Q9NX08 183 aa15.97■□□□□ 0.15
CNKSR1-202ENST00000374253 FKBPLQ9UIM3 349 aa15.97■□□□□ 0.15
CNKSR1-202ENST00000374253 ANGPTL2Q9UKU9 493 aa15.97■□□□□ 0.15
CNKSR1-202ENST00000374253 ANKRD36A6QL64 1941 aa15.97■□□□□ 0.15
CNKSR1-202ENST00000374253 H0Y626 953 aa15.97■□□□□ 0.15
CNKSR1-202ENST00000374253 K7ERQ8 282 aa15.97■□□□□ 0.15
CNKSR1-202ENST00000374253 MAP3K7O43318 606 aa15.97■□□□□ 0.15
CNKSR1-202ENST00000374253 RHOBTB1O94844 696 aa15.97■□□□□ 0.15
CNKSR1-202ENST00000374253 WISP3O95389 354 aaPredicted RBP15.97■□□□□ 0.15
CNKSR1-202ENST00000374253 CD160O95971 181 aa15.97■□□□□ 0.15
CNKSR1-202ENST00000374253 ZNF37AP17032 561 aaPredicted RBP15.97■□□□□ 0.15
CNKSR1-202ENST00000374253 DNAJB1P25685 340 aa15.97■□□□□ 0.15
CNKSR1-202ENST00000374253 ZNF140P52738 457 aaPredicted RBP15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms