RNA–Protein interactions for RNA: ENST00000373995.7

A1CF-203, Transcript of APOBEC1 complementation factor, humanhuman

TSL 2 BASIC

Gene A1CF, Length 2,211 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
A1CF-203ENST00000373995 EGLN2Q96KS0 407 aa12.5□□□□□ -0.41
A1CF-203ENST00000373995 ERP44Q9BS26 406 aa12.5□□□□□ -0.41
A1CF-203ENST00000373995 FRMD8P1Q9BZ68 369 aaPredicted RBP12.5□□□□□ -0.41
A1CF-203ENST00000373995 TMEM245Q9H330 911 aa12.5□□□□□ -0.41
A1CF-203ENST00000373995 SLC40A1Q9NP59 571 aa12.5□□□□□ -0.41
A1CF-203ENST00000373995 CCDC177Q9NQR7 707 aaPredicted RBP12.5□□□□□ -0.41
A1CF-203ENST00000373995 TBCCD1Q9NVR7 557 aa12.5□□□□□ -0.41
A1CF-203ENST00000373995 SMARCAL1Q9NZC9 954 aa12.5□□□□□ -0.41
A1CF-203ENST00000373995 RNF14Q9UBS8 474 aa12.5□□□□□ -0.41
A1CF-203ENST00000373995 NDRG2Q9UN36 371 aaKnown RBP12.5□□□□□ -0.41
A1CF-203ENST00000373995 ERVW-1Q9UQF0 538 aa12.5□□□□□ -0.41
A1CF-203ENST00000373995 GOLGA8CPA6NN73 597 aa12.5□□□□□ -0.41
A1CF-203ENST00000373995 NPC1O15118 1278 aa12.5□□□□□ -0.41
A1CF-203ENST00000373995 STK19P49842 368 aaPredicted RBP12.5□□□□□ -0.41
A1CF-203ENST00000373995 LIMK1P53667 647 aa12.5□□□□□ -0.41
A1CF-203ENST00000373995 MXRA7P84157 204 aa12.5□□□□□ -0.41
A1CF-203ENST00000373995 STK11Q15831 433 aa12.5□□□□□ -0.41
A1CF-203ENST00000373995 CCDC105Q8IYK2 499 aa12.5□□□□□ -0.41
A1CF-203ENST00000373995 PRELID2Q8N945 189 aa12.5□□□□□ -0.41
A1CF-203ENST00000373995 PJA1Q8NG27 643 aa12.5□□□□□ -0.41
A1CF-203ENST00000373995 LRRN4Q8WUT4 740 aa12.5□□□□□ -0.41
A1CF-203ENST00000373995 UCMAQ8WVF2 138 aa12.5□□□□□ -0.41
A1CF-203ENST00000373995 NKD2Q969F2 451 aaPredicted RBP12.5□□□□□ -0.41
A1CF-203ENST00000373995 RPL10LQ96L21 214 aaKnown RBP12.5□□□□□ -0.41
A1CF-203ENST00000373995 ZNF599Q96NL3 588 aa12.5□□□□□ -0.41
A1CF-203ENST00000373995 QKIQ96PU8 341 aaKnown RBP eCLIP12.5□□□□□ -0.411e-6■■■■■ 28.8
A1CF-203ENST00000373995 ACOX2Q99424 681 aa12.5□□□□□ -0.41
A1CF-203ENST00000373995 FAM118BQ9BPY3 351 aa12.5□□□□□ -0.41
A1CF-203ENST00000373995 OCEL1Q9H607 264 aa12.5□□□□□ -0.41
A1CF-203ENST00000373995 RBM12Q9NTZ6 932 aaKnown RBP12.5□□□□□ -0.41
A1CF-203ENST00000373995 SLCO3A1Q9UIG8 710 aa12.5□□□□□ -0.41
A1CF-203ENST00000373995 GRID1Q9ULK0 1009 aa12.5□□□□□ -0.41
A1CF-203ENST00000373995 PNMA8BQ9ULN7 279 aaPredicted RBP12.5□□□□□ -0.41
A1CF-203ENST00000373995 PLA2G4CQ9UP65 541 aa12.5□□□□□ -0.41
A1CF-203ENST00000373995 ACTL7AQ9Y615 435 aa12.5□□□□□ -0.41
A1CF-203ENST00000373995 MYO18AQ92614 2054 aaKnown RBP12.5□□□□□ -0.41
A1CF-203ENST00000373995 FAM170BA6NMN3 283 aa12.49□□□□□ -0.41
A1CF-203ENST00000373995 HACD1B0YJ81 288 aa12.49□□□□□ -0.41
A1CF-203ENST00000373995 K7ERQ8 282 aa12.49□□□□□ -0.41
A1CF-203ENST00000373995 MATN3O15232 486 aa12.49□□□□□ -0.41
A1CF-203ENST00000373995 ZNF821O75541 412 aaPredicted RBP12.49□□□□□ -0.41
A1CF-203ENST00000373995 SRCP12931 536 aa12.49□□□□□ -0.41
A1CF-203ENST00000373995 MRPS21P82921 87 aaKnown RBP12.49□□□□□ -0.41
A1CF-203ENST00000373995 ZNF234Q14588 700 aa12.49□□□□□ -0.41
A1CF-203ENST00000373995 UBXN2BQ14CS0 331 aa12.49□□□□□ -0.41
A1CF-203ENST00000373995 SLC45A4Q5BKX6 768 aa12.49□□□□□ -0.41
A1CF-203ENST00000373995 TIGD7Q6NT04 549 aaPredicted RBP12.49□□□□□ -0.41
A1CF-203ENST00000373995 ERAP2Q6P179 960 aa12.49□□□□□ -0.41
A1CF-203ENST00000373995 DRICH1Q6PGQ1 229 aaPredicted RBP12.49□□□□□ -0.41
A1CF-203ENST00000373995 CCDC81Q6ZN84 652 aa12.49□□□□□ -0.41
A1CF-203ENST00000373995 ZC3H18Q86VM9 953 aaKnown RBP12.49□□□□□ -0.41
A1CF-203ENST00000373995 ZNF354CQ86Y25 554 aa12.49□□□□□ -0.41
A1CF-203ENST00000373995 SH2D3CQ8N5H7 860 aa12.49□□□□□ -0.41
A1CF-203ENST00000373995 IL17RCQ8NAC3 791 aa12.49□□□□□ -0.41
A1CF-203ENST00000373995 CASKIN2Q8WXE0 1202 aa12.49□□□□□ -0.41
A1CF-203ENST00000373995 ATG4AQ8WYN0 398 aa12.49□□□□□ -0.41
A1CF-203ENST00000373995 CLDN23Q96B33 292 aa12.49□□□□□ -0.41
A1CF-203ENST00000373995 CATSPER2Q96P56 530 aa12.49□□□□□ -0.41
A1CF-203ENST00000373995 SP110Q9HB58 689 aa12.49□□□□□ -0.41
A1CF-203ENST00000373995 EURLQ9NYK6 297 aa12.49□□□□□ -0.41
A1CF-203ENST00000373995 EDARQ9UNE0 448 aa12.49□□□□□ -0.41
A1CF-203ENST00000373995 PDE2AO00408 941 aaPredicted RBP12.49□□□□□ -0.41
A1CF-203ENST00000373995 SMAD6O43541 496 aaKnown RBP12.49□□□□□ -0.41
A1CF-203ENST00000373995 LIASO43766 372 aa12.49□□□□□ -0.41
A1CF-203ENST00000373995 TMCC2O75069 709 aa12.49□□□□□ -0.41
A1CF-203ENST00000373995 PDGFBP01127 241 aaPredicted RBP12.49□□□□□ -0.41
A1CF-203ENST00000373995 VAV1P15498 845 aa12.49□□□□□ -0.41
A1CF-203ENST00000373995 GRK2P25098 689 aa12.49□□□□□ -0.41
A1CF-203ENST00000373995 EIF3EP60228 445 aaKnown RBP12.49□□□□□ -0.41
A1CF-203ENST00000373995 SLC10A7Q0GE19 358 aa12.49□□□□□ -0.41
A1CF-203ENST00000373995 AP1B1Q10567 949 aa12.49□□□□□ -0.41
A1CF-203ENST00000373995 HNRNPDQ14103 355 aaKnown RBP12.49□□□□□ -0.41
A1CF-203ENST00000373995 SPIDRQ14159 915 aa12.49□□□□□ -0.41
A1CF-203ENST00000373995 RFTN1Q14699 578 aaPredicted RBP12.49□□□□□ -0.41
A1CF-203ENST00000373995 OASLQ15646 514 aaKnown RBP12.49□□□□□ -0.41
A1CF-203ENST00000373995 CCNG2Q16589 344 aa12.49□□□□□ -0.41
A1CF-203ENST00000373995 CYP1B1Q16678 543 aa12.49□□□□□ -0.41
A1CF-203ENST00000373995 CCNYQ8ND76 341 aa12.49□□□□□ -0.41
A1CF-203ENST00000373995 SLC22A8Q8TCC7 542 aa12.49□□□□□ -0.41
A1CF-203ENST00000373995 MGARPQ8TDB4 240 aa12.49□□□□□ -0.41
A1CF-203ENST00000373995 TFB1MQ8WVM0 346 aaKnown RBP12.49□□□□□ -0.41
A1CF-203ENST00000373995 ZDHHC4Q9NPG8 344 aa12.49□□□□□ -0.41
A1CF-203ENST00000373995 PFDN4Q9NQP4 134 aa12.49□□□□□ -0.41
A1CF-203ENST00000373995 LUZP4Q9P127 313 aa12.49□□□□□ -0.41
A1CF-203ENST00000373995 SLC25A13Q9UJS0 675 aa12.49□□□□□ -0.41
A1CF-203ENST00000373995 DNPEPQ9ULA0 475 aa12.49□□□□□ -0.41
A1CF-203ENST00000373995 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.48□□□□□ -0.41
A1CF-203ENST00000373995 BCLAF3A2AJT9 711 aaKnown RBP12.48□□□□□ -0.41
A1CF-203ENST00000373995 TSPAN9O75954 239 aa12.48□□□□□ -0.41
A1CF-203ENST00000373995 SEC31AO94979 1220 aaKnown RBP12.48□□□□□ -0.41
A1CF-203ENST00000373995 CFL1P23528 166 aaKnown RBP12.48□□□□□ -0.41
A1CF-203ENST00000373995 LSP1P33241 339 aa12.48□□□□□ -0.41
A1CF-203ENST00000373995 IL12RB1P42701 662 aa12.48□□□□□ -0.41
A1CF-203ENST00000373995 STT3AP46977 705 aa12.48□□□□□ -0.41
A1CF-203ENST00000373995 SEC13P55735 322 aa12.48□□□□□ -0.41
A1CF-203ENST00000373995 IFI35P80217 286 aaPredicted RBP12.48□□□□□ -0.41
A1CF-203ENST00000373995 MRPS15P82914 257 aaKnown RBP12.48□□□□□ -0.41
A1CF-203ENST00000373995 LRRC32Q14392 662 aa12.48□□□□□ -0.41
A1CF-203ENST00000373995 HSF5Q4G112 596 aaPredicted RBP12.48□□□□□ -0.41
A1CF-203ENST00000373995 C2orf27AQ580R0 203 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms