RNA–Protein interactions for RNA: ENST00000372755.7

VCL-202, Transcript of vinculin, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VCL, Length 6,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-202ENST00000372755 BICRALQ6AI39 1079 aa11.55□□□□□ -0.56
VCL-202ENST00000372755 CAPN13Q6MZZ7 669 aaPredicted RBP11.55□□□□□ -0.56
VCL-202ENST00000372755 AADACL2Q6P093 401 aa11.55□□□□□ -0.56
VCL-202ENST00000372755 SAPCD2Q86UD0 394 aa11.55□□□□□ -0.56
VCL-202ENST00000372755 VSIG10LQ86VR7 867 aa11.55□□□□□ -0.56
VCL-202ENST00000372755 MREGQ8N565 214 aa11.55□□□□□ -0.56
VCL-202ENST00000372755 PTCD2Q8WV60 388 aaKnown RBP11.55□□□□□ -0.56
VCL-202ENST00000372755 HOPXQ9BPY8 73 aaPredicted RBP11.55□□□□□ -0.56
VCL-202ENST00000372755 KCNN2Q9H2S1 579 aa11.55□□□□□ -0.56
VCL-202ENST00000372755 CLK4Q9HAZ1 481 aaKnown RBP11.55□□□□□ -0.56
VCL-202ENST00000372755 KCNMB3Q9NPA1 279 aa11.55□□□□□ -0.56
VCL-202ENST00000372755 C8orf4Q9NR00 106 aa11.55□□□□□ -0.56
VCL-202ENST00000372755 CKLFQ9UBR5 152 aa11.55□□□□□ -0.56
VCL-202ENST00000372755 FBXO5Q9UKT4 447 aa11.55□□□□□ -0.56
VCL-202ENST00000372755 MKL2Q9ULH7 1088 aa11.55□□□□□ -0.56
VCL-202ENST00000372755 POLR3HQ9Y535 204 aaPredicted RBP11.55□□□□□ -0.56
VCL-202ENST00000372755 DNTTP04053 509 aa11.54□□□□□ -0.56
VCL-202ENST00000372755 PTDSS1P48651 473 aaKnown RBP11.54□□□□□ -0.56
VCL-202ENST00000372755 CRYBB1P53674 252 aaPredicted RBP11.54□□□□□ -0.56
VCL-202ENST00000372755 LSM3P62310 102 aaKnown RBP11.54□□□□□ -0.56
VCL-202ENST00000372755 RAPSNQ13702 412 aa11.54□□□□□ -0.56
VCL-202ENST00000372755 UBAP2LQ14157 1087 aaKnown RBP11.54□□□□□ -0.56
VCL-202ENST00000372755 CPSF6Q16630 551 aaKnown RBP eCLIP11.54□□□□□ -0.56
VCL-202ENST00000372755 CRELD2Q6UXH1 353 aaPredicted RBP11.54□□□□□ -0.56
VCL-202ENST00000372755 MYO19Q96H55 970 aa11.54□□□□□ -0.56
VCL-202ENST00000372755 CNPPD1Q9BV87 410 aa11.54□□□□□ -0.56
VCL-202ENST00000372755 PRRG4Q9BZD6 226 aa11.54□□□□□ -0.56
VCL-202ENST00000372755 CDT1Q9H211 546 aa11.54□□□□□ -0.56
VCL-202ENST00000372755 A0A1W2PRG6 482 aa11.54□□□□□ -0.56
VCL-202ENST00000372755 TISP43B9A030 160 aa11.54□□□□□ -0.56
VCL-202ENST00000372755 SHBGP04278 402 aa11.54□□□□□ -0.56
VCL-202ENST00000372755 CTPS1P17812 591 aa11.54□□□□□ -0.56
VCL-202ENST00000372755 CXCR3P49682 368 aa11.54□□□□□ -0.56
VCL-202ENST00000372755 MANFP55145 182 aaKnown RBP11.54□□□□□ -0.56
VCL-202ENST00000372755 GMFBP60983 142 aa11.54□□□□□ -0.56
VCL-202ENST00000372755 ARF5P84085 180 aa11.54□□□□□ -0.56
VCL-202ENST00000372755 CHST15Q7LFX5 561 aaPredicted RBP11.54□□□□□ -0.56
VCL-202ENST00000372755 JAZF1Q86VZ6 243 aa11.54□□□□□ -0.56
VCL-202ENST00000372755 HPS6Q86YV9 775 aa11.54□□□□□ -0.56
VCL-202ENST00000372755 RAVER1Q8IY67 606 aaKnown RBP11.54□□□□□ -0.56
VCL-202ENST00000372755 SIX5Q8N196 739 aa11.54□□□□□ -0.56
VCL-202ENST00000372755 PIK3C3Q8NEB9 887 aa11.54□□□□□ -0.56
VCL-202ENST00000372755 RCN3Q96D15 328 aa11.54□□□□□ -0.56
VCL-202ENST00000372755 IQCMA0A1B0GVH7 501 aa11.54□□□□□ -0.56
VCL-202ENST00000372755 TRAFD1O14545 582 aaPredicted RBP11.54□□□□□ -0.56
VCL-202ENST00000372755 RGS20O76081 388 aa11.54□□□□□ -0.56
VCL-202ENST00000372755 SMAD3P84022 425 aaKnown RBP11.54□□□□□ -0.56
VCL-202ENST00000372755 SRSF11Q05519 484 aaKnown RBP11.54□□□□□ -0.56
VCL-202ENST00000372755 ITGB3BPQ13352 177 aaPredicted RBP11.54□□□□□ -0.56
VCL-202ENST00000372755 RIPK1Q13546 671 aa11.54□□□□□ -0.56
VCL-202ENST00000372755 CPTPQ5TA50 214 aa11.54□□□□□ -0.56
VCL-202ENST00000372755 TMPRSS11AQ6ZMR5 421 aa11.54□□□□□ -0.56
VCL-202ENST00000372755 UBE2R2Q712K3 238 aaPredicted RBP11.54□□□□□ -0.56
VCL-202ENST00000372755 ATCAYQ86WG3 371 aa11.54□□□□□ -0.56
VCL-202ENST00000372755 DAW1Q8N136 415 aa11.54□□□□□ -0.56
VCL-202ENST00000372755 LNX1Q8TBB1 728 aaPredicted RBP11.54□□□□□ -0.56
VCL-202ENST00000372755 KBTBD7Q8WVZ9 684 aa11.54□□□□□ -0.56
VCL-202ENST00000372755 RHOBTB2Q9BYZ6 727 aa11.54□□□□□ -0.56
VCL-202ENST00000372755 G3V2T6 193 aa11.54□□□□□ -0.56
VCL-202ENST00000372755 DRG2P55039 364 aaKnown RBP11.54□□□□□ -0.56
VCL-202ENST00000372755 MED22Q15528 200 aa11.54□□□□□ -0.56
VCL-202ENST00000372755 SCIMPQ6UWF3 145 aa11.54□□□□□ -0.56
VCL-202ENST00000372755 FAM92BQ6ZTR7 304 aa11.54□□□□□ -0.56
VCL-202ENST00000372755 C17orf64Q86WR6 236 aa11.54□□□□□ -0.56
VCL-202ENST00000372755 TBC1D10AQ9BXI6 508 aa11.54□□□□□ -0.56
VCL-202ENST00000372755 VWA7Q9Y334 891 aa11.54□□□□□ -0.56
VCL-202ENST00000372755 FAM25EA8MYX2 175 aa11.54□□□□□ -0.56
VCL-202ENST00000372755 CHST10O43529 356 aa11.54□□□□□ -0.56
VCL-202ENST00000372755 PGK1P00558 417 aa11.54□□□□□ -0.56
VCL-202ENST00000372755 SMARCB1Q12824 385 aa11.54□□□□□ -0.56
VCL-202ENST00000372755 DPYSQ14117 519 aa11.54□□□□□ -0.56
VCL-202ENST00000372755 MPPE1Q53F39 396 aa11.54□□□□□ -0.56
VCL-202ENST00000372755 PARGQ86W56 976 aa11.54□□□□□ -0.56
VCL-202ENST00000372755 TMC8Q8IU68 726 aa11.54□□□□□ -0.56
VCL-202ENST00000372755 SLC9A9Q8IVB4 645 aa11.54□□□□□ -0.56
VCL-202ENST00000372755 TMEM161BQ8NDZ6 487 aa11.54□□□□□ -0.56
VCL-202ENST00000372755 OR52K2Q8NGK3 314 aa11.54□□□□□ -0.56
VCL-202ENST00000372755 FAM163AQ96GL9 167 aaPredicted RBP11.54□□□□□ -0.56
VCL-202ENST00000372755 TDRD1Q9BXT4 1180 aaKnown RBP11.54□□□□□ -0.56
VCL-202ENST00000372755 WDR12Q9GZL7 423 aaKnown RBP11.54□□□□□ -0.56
VCL-202ENST00000372755 GPN1Q9HCN4 374 aaPredicted RBP11.54□□□□□ -0.56
VCL-202ENST00000372755 UBIAD1Q9Y5Z9 338 aa11.54□□□□□ -0.56
VCL-202ENST00000372755 NCOA3Q9Y6Q9 1424 aa11.54□□□□□ -0.56
VCL-202ENST00000372755 GRM6O15303 877 aa11.54□□□□□ -0.56
VCL-202ENST00000372755 FNBP1LQ5T0N5 605 aa11.54□□□□□ -0.56
VCL-202ENST00000372755 PIK3R6Q5UE93 754 aa11.54□□□□□ -0.56
VCL-202ENST00000372755 ERICH5Q6P6B1 374 aa11.54□□□□□ -0.56
VCL-202ENST00000372755 TAF8Q7Z7C8 310 aa11.54□□□□□ -0.56
VCL-202ENST00000372755 CCDC36Q8IYA8 594 aa11.54□□□□□ -0.56
VCL-202ENST00000372755 LRRC52Q8N7C0 313 aa11.54□□□□□ -0.56
VCL-202ENST00000372755 PHC3Q8NDX5 983 aa11.54□□□□□ -0.56
VCL-202ENST00000372755 AP2M1Q96CW1 435 aa11.54□□□□□ -0.56
VCL-202ENST00000372755 AIF1LQ9BQI0 150 aa11.54□□□□□ -0.56
VCL-202ENST00000372755 RTKNQ9BST9 563 aa11.54□□□□□ -0.56
VCL-202ENST00000372755 DUSP16Q9BY84 665 aa11.54□□□□□ -0.56
VCL-202ENST00000372755 DERAQ9Y315 318 aa11.54□□□□□ -0.56
VCL-202ENST00000372755 BCORL1Q5H9F3 1711 aa11.53□□□□□ -0.56
VCL-202ENST00000372755 ASTN1O14525 1302 aa11.53□□□□□ -0.56
VCL-202ENST00000372755 ARHGEF33A8MVX0 844 aa11.53□□□□□ -0.56
VCL-202ENST00000372755 TCEA3O75764 348 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms