RNA–Protein interactions for RNA: ENST00000372621.8

CTPS1-202, Transcript of CTP synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTPS1, Length 3,201 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS1-202ENST00000372621 PBXIP1Q96AQ6 731 aa12.77□□□□□ -0.37
CTPS1-202ENST00000372621 SERPINB11Q96P15 392 aa12.77□□□□□ -0.37
CTPS1-202ENST00000372621 CIB1Q99828 191 aa12.77□□□□□ -0.37
CTPS1-202ENST00000372621 NOL11Q9H8H0 719 aaKnown RBP12.77□□□□□ -0.37
CTPS1-202ENST00000372621 AKTIPQ9H8T0 292 aa12.77□□□□□ -0.37
CTPS1-202ENST00000372621 LOC285095A0A1B0GVY8 99 aa12.77□□□□□ -0.37
CTPS1-202ENST00000372621 A0A1W2PQH9 124 aa12.77□□□□□ -0.37
CTPS1-202ENST00000372621 MYADML2A6NDP7 307 aa12.77□□□□□ -0.37
CTPS1-202ENST00000372621 BBIP1A8MTZ0 92 aa12.77□□□□□ -0.37
CTPS1-202ENST00000372621 HTRA2O43464 458 aaPredicted RBP12.77□□□□□ -0.37
CTPS1-202ENST00000372621 ITGB1P05556 798 aa12.77□□□□□ -0.37
CTPS1-202ENST00000372621 CDH2P19022 906 aaPredicted RBP12.77□□□□□ -0.37
CTPS1-202ENST00000372621 PCSK6P29122 969 aa12.77□□□□□ -0.37
CTPS1-202ENST00000372621 ALDH3B2P48448 385 aa12.77□□□□□ -0.37
CTPS1-202ENST00000372621 ACVR1Q04771 509 aa12.77□□□□□ -0.37
CTPS1-202ENST00000372621 SIRPB2Q5JXA9 342 aa12.77□□□□□ -0.37
CTPS1-202ENST00000372621 PPP4R4Q6NUP7 873 aa12.77□□□□□ -0.37
CTPS1-202ENST00000372621 ZNF549Q6P9A3 640 aa12.77□□□□□ -0.37
CTPS1-202ENST00000372621 LAYNQ6UX15 382 aa12.77□□□□□ -0.37
CTPS1-202ENST00000372621 DHFR2Q86XF0 187 aa12.77□□□□□ -0.37
CTPS1-202ENST00000372621 TSPAN14Q8NG11 270 aa12.77□□□□□ -0.37
CTPS1-202ENST00000372621 LRCH3Q96II8 777 aa12.77□□□□□ -0.37
CTPS1-202ENST00000372621 KLHL5Q96PQ7 755 aa12.77□□□□□ -0.37
CTPS1-202ENST00000372621 ANKRD60Q9BZ19 345 aa12.77□□□□□ -0.37
CTPS1-202ENST00000372621 CPA4Q9UI42 421 aa12.77□□□□□ -0.37
CTPS1-202ENST00000372621 TLR6Q9Y2C9 796 aa12.77□□□□□ -0.37
CTPS1-202ENST00000372621 ANKRD36A6QL64 1941 aa12.76□□□□□ -0.37
CTPS1-202ENST00000372621 ARHGAP10A1A4S6 786 aa12.76□□□□□ -0.37
CTPS1-202ENST00000372621 OR51F1A6NGY5 319 aa12.76□□□□□ -0.37
CTPS1-202ENST00000372621 H3BNH8 94 aa12.76□□□□□ -0.37
CTPS1-202ENST00000372621 H3BSA7 217 aa12.76□□□□□ -0.37
CTPS1-202ENST00000372621 MGEA5O60502 916 aa12.76□□□□□ -0.37
CTPS1-202ENST00000372621 TRPA1O75762 1119 aa12.76□□□□□ -0.37
CTPS1-202ENST00000372621 MT-CO1P00395 513 aa12.76□□□□□ -0.37
CTPS1-202ENST00000372621 CTSHP09668 335 aa12.76□□□□□ -0.37
CTPS1-202ENST00000372621 ATP6V1B2P21281 511 aa12.76□□□□□ -0.37
CTPS1-202ENST00000372621 MARC1Q5VT66 337 aa12.76□□□□□ -0.37
CTPS1-202ENST00000372621 MYO1HQ8N1T3 1032 aa12.76□□□□□ -0.37
CTPS1-202ENST00000372621 OR2T34Q8NGX1 318 aa12.76□□□□□ -0.37
CTPS1-202ENST00000372621 OR2T3Q8NH03 318 aa12.76□□□□□ -0.37
CTPS1-202ENST00000372621 ARRDC2Q8TBH0 407 aa12.76□□□□□ -0.37
CTPS1-202ENST00000372621 FAM110BQ8TC76 370 aa12.76□□□□□ -0.37
CTPS1-202ENST00000372621 EZH1Q92800 747 aaPredicted RBP12.76□□□□□ -0.37
CTPS1-202ENST00000372621 ZUFSPQ96AP4 578 aa12.76□□□□□ -0.37
CTPS1-202ENST00000372621 DNAJC1Q96KC8 554 aaKnown RBP12.76□□□□□ -0.37
CTPS1-202ENST00000372621 TMEM248Q9NWD8 314 aa12.76□□□□□ -0.37
CTPS1-202ENST00000372621 TMCO1Q9UM00 188 aa12.76□□□□□ -0.37
CTPS1-202ENST00000372621 PHF24Q9UPV7 400 aa12.76□□□□□ -0.37
CTPS1-202ENST00000372621 KCTD3Q9Y597 815 aa12.76□□□□□ -0.37
CTPS1-202ENST00000372621 GBF1Q92538 1859 aa12.76□□□□□ -0.37
CTPS1-202ENST00000372621 TTC24A2A3L6 582 aaPredicted RBP12.76□□□□□ -0.37
CTPS1-202ENST00000372621 CDK14O94921 469 aa12.76□□□□□ -0.37
CTPS1-202ENST00000372621 GRIK1P39086 918 aa12.76□□□□□ -0.37
CTPS1-202ENST00000372621 SUOXP51687 545 aa12.76□□□□□ -0.37
CTPS1-202ENST00000372621 PITRM1Q5JRX3 1037 aa12.76□□□□□ -0.37
CTPS1-202ENST00000372621 GDF6Q6KF10 455 aaPredicted RBP12.76□□□□□ -0.37
CTPS1-202ENST00000372621 ERMP1Q7Z2K6 904 aa12.76□□□□□ -0.37
CTPS1-202ENST00000372621 PGBD5Q8N414 524 aa12.76□□□□□ -0.37
CTPS1-202ENST00000372621 OR6P1Q8NGX9 317 aa12.76□□□□□ -0.37
CTPS1-202ENST00000372621 CANT1Q8WVQ1 401 aa12.76□□□□□ -0.37
CTPS1-202ENST00000372621 ZNF512Q96ME7 567 aaPredicted RBP12.76□□□□□ -0.37
CTPS1-202ENST00000372621 A0A0J9YYE9 177 aa12.75□□□□□ -0.37
CTPS1-202ENST00000372621 F8W810 466 aa12.75□□□□□ -0.37
CTPS1-202ENST00000372621 PPP6CO00743 305 aa12.75□□□□□ -0.37
CTPS1-202ENST00000372621 NME4O00746 187 aa12.75□□□□□ -0.37
CTPS1-202ENST00000372621 TMCC1O94876 653 aa12.75□□□□□ -0.37
CTPS1-202ENST00000372621 MTHFD2P13995 350 aa12.75□□□□□ -0.37
CTPS1-202ENST00000372621 RHOQP17081 205 aa12.75□□□□□ -0.37
CTPS1-202ENST00000372621 TSPY1Q01534 308 aa12.75□□□□□ -0.37
CTPS1-202ENST00000372621 PRKCQQ04759 706 aa12.75□□□□□ -0.37
CTPS1-202ENST00000372621 SPRYD7Q5W111 196 aa12.75□□□□□ -0.37
CTPS1-202ENST00000372621 TFAP2DQ7Z6R9 452 aa12.75□□□□□ -0.37
CTPS1-202ENST00000372621 SPATA2LQ8IUW3 424 aaPredicted RBP12.75□□□□□ -0.37
CTPS1-202ENST00000372621 THEM5Q8N1Q8 247 aa12.75□□□□□ -0.37
CTPS1-202ENST00000372621 GRIN3AQ8TCU5 1115 aa12.75□□□□□ -0.37
CTPS1-202ENST00000372621 SUSD3Q96L08 255 aa12.75□□□□□ -0.37
CTPS1-202ENST00000372621 TMEM79Q9BSE2 394 aa12.75□□□□□ -0.37
CTPS1-202ENST00000372621 HAUS8Q9BT25 410 aa12.75□□□□□ -0.37
CTPS1-202ENST00000372621 EFHD1Q9BUP0 239 aa12.75□□□□□ -0.37
CTPS1-202ENST00000372621 RGS18Q9NS28 235 aa12.75□□□□□ -0.37
CTPS1-202ENST00000372621 CCM2LQ9NUG4 571 aaPredicted RBP12.75□□□□□ -0.37
CTPS1-202ENST00000372621 CCDC160A6NGH7 325 aa12.75□□□□□ -0.37
CTPS1-202ENST00000372621 ZNF839A8K0R7 811 aa12.75□□□□□ -0.37
CTPS1-202ENST00000372621 PLOD2O00469 737 aa12.75□□□□□ -0.37
CTPS1-202ENST00000372621 DLGAP1O14490 977 aa12.75□□□□□ -0.37
CTPS1-202ENST00000372621 SOCS2O14508 198 aa12.75□□□□□ -0.37
CTPS1-202ENST00000372621 GPR182O15218 404 aa12.75□□□□□ -0.37
CTPS1-202ENST00000372621 TIPRLO75663 272 aa12.75□□□□□ -0.37
CTPS1-202ENST00000372621 CNTN5O94779 1100 aa12.75□□□□□ -0.37
CTPS1-202ENST00000372621 CKMT2P17540 419 aa12.75□□□□□ -0.37
CTPS1-202ENST00000372621 CDH13P55290 713 aa12.75□□□□□ -0.37
CTPS1-202ENST00000372621 TUSC3Q13454 348 aa12.75□□□□□ -0.37
CTPS1-202ENST00000372621 CYTH1Q15438 398 aa12.75□□□□□ -0.37
CTPS1-202ENST00000372621 ALFQ53S48 1182 aa12.75□□□□□ -0.37
CTPS1-202ENST00000372621 MS4A13Q5J8X5 152 aa12.75□□□□□ -0.37
CTPS1-202ENST00000372621 KANK2Q63ZY3 851 aa12.75□□□□□ -0.37
CTPS1-202ENST00000372621 MSANTD2Q6P1R3 559 aa12.75□□□□□ -0.37
CTPS1-202ENST00000372621 PCYOX1LQ8NBM8 494 aa12.75□□□□□ -0.37
CTPS1-202ENST00000372621 OR52K2Q8NGK3 314 aa12.75□□□□□ -0.37
CTPS1-202ENST00000372621 GPR150Q8NGU9 434 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms