RNA–Protein interactions for RNA: ENST00000372232.7

ATG4A-203, Transcript of autophagy related 4A cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4A, Length 2,315 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-203ENST00000372232 ERAP2Q6P179 960 aa8.88□□□□□ -0.99
ATG4A-203ENST00000372232 MON1BQ7L1V2 547 aa8.88□□□□□ -0.99
ATG4A-203ENST00000372232 LRRTM3Q86VH5 581 aa8.88□□□□□ -0.99
ATG4A-203ENST00000372232 ERO1BQ86YB8 467 aa8.88□□□□□ -0.99
ATG4A-203ENST00000372232 ARID3BQ8IVW6 561 aaPredicted RBP8.88□□□□□ -0.99
ATG4A-203ENST00000372232 ABRAQ8N0Z2 381 aa8.88□□□□□ -0.99
ATG4A-203ENST00000372232 PARP8Q8N3A8 854 aa8.88□□□□□ -0.99
ATG4A-203ENST00000372232 SNX31Q8N9S9 440 aa8.88□□□□□ -0.99
ATG4A-203ENST00000372232 OR13F1Q8NGS4 319 aa8.88□□□□□ -0.99
ATG4A-203ENST00000372232 NXPE3Q969Y0 559 aa8.88□□□□□ -0.99
ATG4A-203ENST00000372232 FAM167AQ96KS9 214 aa8.88□□□□□ -0.99
ATG4A-203ENST00000372232 GPR20Q99678 358 aa8.88□□□□□ -0.99
ATG4A-203ENST00000372232 TMEM246Q9BRR3 403 aa8.88□□□□□ -0.99
ATG4A-203ENST00000372232 DHRS4Q9BTZ2 278 aa8.88□□□□□ -0.99
ATG4A-203ENST00000372232 TRIM15Q9C019 465 aa8.88□□□□□ -0.99
ATG4A-203ENST00000372232 RAD21L1Q9H4I0 556 aa8.88□□□□□ -0.99
ATG4A-203ENST00000372232 VPS37BQ9H9H4 285 aa8.88□□□□□ -0.99
ATG4A-203ENST00000372232 TXNRD2Q9NNW7 524 aa8.88□□□□□ -0.99
ATG4A-203ENST00000372232 GPN3Q9UHW5 284 aaPredicted RBP8.88□□□□□ -0.99
ATG4A-203ENST00000372232 ATP6V1HQ9UI12 483 aa8.88□□□□□ -0.99
ATG4A-203ENST00000372232 CAB39Q9Y376 341 aaPredicted RBP8.88□□□□□ -0.99
ATG4A-203ENST00000372232 C12orf71A8MTZ7 269 aa8.87□□□□□ -0.99
ATG4A-203ENST00000372232 ZBTB42B2RXF5 422 aa8.87□□□□□ -0.99
ATG4A-203ENST00000372232 RNF223E7ERA6 249 aa8.87□□□□□ -0.99
ATG4A-203ENST00000372232 I3L4J1 428 aa8.87□□□□□ -0.99
ATG4A-203ENST00000372232 YKT6O15498 198 aa8.87□□□□□ -0.99
ATG4A-203ENST00000372232 OR5F1O95221 314 aa8.87□□□□□ -0.99
ATG4A-203ENST00000372232 S100A6P06703 90 aa8.87□□□□□ -0.99
ATG4A-203ENST00000372232 LAMTOR4Q0VGL1 99 aa8.87□□□□□ -0.99
ATG4A-203ENST00000372232 PDIA2Q13087 525 aaKnown RBP8.87□□□□□ -0.99
ATG4A-203ENST00000372232 TUBB3Q13509 450 aa8.87□□□□□ -0.99
ATG4A-203ENST00000372232 SLC10A6Q3KNW5 377 aa8.87□□□□□ -0.99
ATG4A-203ENST00000372232 HSDL1Q3SXM5 330 aa8.87□□□□□ -0.99
ATG4A-203ENST00000372232 KCNT1Q5JUK3 1230 aa8.87□□□□□ -0.99
ATG4A-203ENST00000372232 IZUMO3Q5VZ72 239 aa8.87□□□□□ -0.99
ATG4A-203ENST00000372232 LLGL2Q6P1M3 1020 aa8.87□□□□□ -0.99
ATG4A-203ENST00000372232 DENND5BQ6ZUT9 1274 aa8.87□□□□□ -0.99
ATG4A-203ENST00000372232 LINC00518Q8N0U6 118 aa8.87□□□□□ -0.99
ATG4A-203ENST00000372232 AADATQ8N5Z0 425 aa8.87□□□□□ -0.99
ATG4A-203ENST00000372232 RAB2BQ8WUD1 216 aa8.87□□□□□ -0.99
ATG4A-203ENST00000372232 APOPT1Q96IL0 206 aa8.87□□□□□ -0.99
ATG4A-203ENST00000372232 TMEM121Q9BTD3 319 aa8.87□□□□□ -0.99
ATG4A-203ENST00000372232 MRPL4Q9BYD3 311 aaKnown RBP8.87□□□□□ -0.99
ATG4A-203ENST00000372232 STN1Q9H668 368 aaKnown RBP8.87□□□□□ -0.99
ATG4A-203ENST00000372232 POLR1BQ9H9Y6 1135 aa8.87□□□□□ -0.99
ATG4A-203ENST00000372232 CYP4F11Q9HBI6 524 aa8.87□□□□□ -0.99
ATG4A-203ENST00000372232 SAYSD1Q9NPB0 183 aa8.87□□□□□ -0.99
ATG4A-203ENST00000372232 RBPJLQ9UBG7 517 aa8.87□□□□□ -0.99
ATG4A-203ENST00000372232 DNMT3LQ9UJW3 386 aa8.87□□□□□ -0.99
ATG4A-203ENST00000372232 ZNF229Q9UJW7 825 aa8.87□□□□□ -0.99
ATG4A-203ENST00000372232 ZNF221Q9UK13 617 aa8.87□□□□□ -0.99
ATG4A-203ENST00000372232 PRPF19Q9UMS4 504 aaKnown RBP8.87□□□□□ -0.99
ATG4A-203ENST00000372232 WBP11Q9Y2W2 641 aaKnown RBP8.87□□□□□ -0.99
ATG4A-203ENST00000372232 POLR3KQ9Y2Y1 108 aaPredicted RBP8.87□□□□□ -0.99
ATG4A-203ENST00000372232 A0A0G2JMZ2 1700 aa8.87□□□□□ -0.99
ATG4A-203ENST00000372232 SBF1O95248 1867 aa8.87□□□□□ -0.99
ATG4A-203ENST00000372232 POLR2AP24928 1970 aaKnown RBP8.87□□□□□ -0.99
ATG4A-203ENST00000372232 IGKV6-21A0A0C4DH24 114 aa8.87□□□□□ -0.99
ATG4A-203ENST00000372232 A0A0G2JMP0 313 aa8.87□□□□□ -0.99
ATG4A-203ENST00000372232 TYW5A2RUC4 315 aaKnown RBP8.87□□□□□ -0.99
ATG4A-203ENST00000372232 PLOD2O00469 737 aa8.87□□□□□ -0.99
ATG4A-203ENST00000372232 GAS2O43903 313 aaKnown RBP8.87□□□□□ -0.99
ATG4A-203ENST00000372232 NDUFS2O75306 463 aa8.87□□□□□ -0.99
ATG4A-203ENST00000372232 CILPO75339 1184 aa8.87□□□□□ -0.99
ATG4A-203ENST00000372232 DEAF1O75398 565 aaPredicted RBP8.87□□□□□ -0.99
ATG4A-203ENST00000372232 FGF18O76093 207 aa8.87□□□□□ -0.99
ATG4A-203ENST00000372232 CPNE6O95741 557 aa8.87□□□□□ -0.99
ATG4A-203ENST00000372232 CST3P01034 146 aaPredicted RBP8.87□□□□□ -0.99
ATG4A-203ENST00000372232 PTPN1P18031 435 aaKnown RBP8.87□□□□□ -0.99
ATG4A-203ENST00000372232 PIK3R1P27986 724 aa8.87□□□□□ -0.99
ATG4A-203ENST00000372232 RBL1P28749 1068 aa8.87□□□□□ -0.99
ATG4A-203ENST00000372232 EEF1DP29692 281 aaKnown RBP8.87□□□□□ -0.99
ATG4A-203ENST00000372232 TNFSF9P41273 254 aa8.87□□□□□ -0.99
ATG4A-203ENST00000372232 BLVRAP53004 296 aa8.87□□□□□ -0.99
ATG4A-203ENST00000372232 PRKAA2P54646 552 aa8.87□□□□□ -0.99
ATG4A-203ENST00000372232 NOMO3P69849 1222 aa8.87□□□□□ -0.99
ATG4A-203ENST00000372232 PRAMEP78395 509 aa8.87□□□□□ -0.99
ATG4A-203ENST00000372232 ZNF33BQ06732 778 aa8.87□□□□□ -0.99
ATG4A-203ENST00000372232 GRM1Q13255 1194 aa8.87□□□□□ -0.99
ATG4A-203ENST00000372232 MXD4Q14582 209 aaPredicted RBP8.87□□□□□ -0.99
ATG4A-203ENST00000372232 PPP2R5DQ14738 602 aa8.87□□□□□ -0.99
ATG4A-203ENST00000372232 CELF3Q5SZQ8 465 aaKnown RBP8.87□□□□□ -0.99
ATG4A-203ENST00000372232 DBX2Q6ZNG2 339 aa8.87□□□□□ -0.99
ATG4A-203ENST00000372232 PLPPR4Q7Z2D5 763 aa8.87□□□□□ -0.99
ATG4A-203ENST00000372232 PHF13Q86YI8 300 aaPredicted RBP8.87□□□□□ -0.99
ATG4A-203ENST00000372232 WDR49Q8IV35 697 aa8.87□□□□□ -0.99
ATG4A-203ENST00000372232 CADM2Q8N3J6 435 aa8.87□□□□□ -0.99
ATG4A-203ENST00000372232 MFSD4AQ8N468 514 aa8.87□□□□□ -0.99
ATG4A-203ENST00000372232 FAM47BQ8NA70 645 aa8.87□□□□□ -0.99
ATG4A-203ENST00000372232 SVIPQ8NHG7 77 aa8.87□□□□□ -0.99
ATG4A-203ENST00000372232 FNIP1Q8TF40 1166 aa8.87□□□□□ -0.99
ATG4A-203ENST00000372232 C1orf54Q8WWF1 131 aa8.87□□□□□ -0.99
ATG4A-203ENST00000372232 VCPIP1Q96JH7 1222 aa8.87□□□□□ -0.99
ATG4A-203ENST00000372232 RILPQ96NA2 401 aa8.87□□□□□ -0.99
ATG4A-203ENST00000372232 SECISBP2Q96T21 854 aaKnown RBP8.87□□□□□ -0.99
ATG4A-203ENST00000372232 OSMRQ99650 979 aa8.87□□□□□ -0.99
ATG4A-203ENST00000372232 ACO2Q99798 780 aaKnown RBP8.87□□□□□ -0.99
ATG4A-203ENST00000372232 C11orf70Q9BRQ4 267 aa8.87□□□□□ -0.99
ATG4A-203ENST00000372232 MCMBPQ9BTE3 642 aa8.87□□□□□ -0.99
ATG4A-203ENST00000372232 RHOBTB2Q9BYZ6 727 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms