RNA–Protein interactions for RNA: ENST00000371937.8

ATPAF1-202, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATPAF1, Length 1,827 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-202ENST00000371937 GLRA3O75311 464 aa26.32■■□□□ 1.8
ATPAF1-202ENST00000371937 UGT2B4P06133 528 aa26.32■■□□□ 1.8
ATPAF1-202ENST00000371937 HNF1BP35680 557 aa26.32■■□□□ 1.8
ATPAF1-202ENST00000371937 KDSRQ06136 332 aa26.32■■□□□ 1.8
ATPAF1-202ENST00000371937 USP10Q14694 798 aaKnown RBP26.32■■□□□ 1.8
ATPAF1-202ENST00000371937 INSCQ1MX18 579 aa26.32■■□□□ 1.8
ATPAF1-202ENST00000371937 FASTKD1Q53R41 847 aaKnown RBP26.32■■□□□ 1.8
ATPAF1-202ENST00000371937 CDHR3Q6ZTQ4 885 aa26.32■■□□□ 1.8
ATPAF1-202ENST00000371937 CMC1Q7Z7K0 106 aa26.32■■□□□ 1.8
ATPAF1-202ENST00000371937 TERB1Q8NA31 727 aa26.32■■□□□ 1.8
ATPAF1-202ENST00000371937 BCAS4Q8TDM0 211 aa26.32■■□□□ 1.8
ATPAF1-202ENST00000371937 NXPE3Q969Y0 559 aa26.32■■□□□ 1.8
ATPAF1-202ENST00000371937 SCRN2Q96FV2 425 aa26.32■■□□□ 1.8
ATPAF1-202ENST00000371937 LRIG1Q96JA1 1093 aa26.32■■□□□ 1.8
ATPAF1-202ENST00000371937 LYSMD1Q96S90 227 aa26.32■■□□□ 1.8
ATPAF1-202ENST00000371937 ZFYVE1Q9HBF4 777 aa26.32■■□□□ 1.8
ATPAF1-202ENST00000371937 IL17CQ9P0M4 197 aa26.32■■□□□ 1.8
ATPAF1-202ENST00000371937 MARCH4Q9P2E8 410 aaPredicted RBP26.32■■□□□ 1.8
ATPAF1-202ENST00000371937 EPS15L1Q9UBC2 864 aa26.32■■□□□ 1.8
ATPAF1-202ENST00000371937 FAM95CA0A1B0GW59 222 aa26.31■■□□□ 1.8
ATPAF1-202ENST00000371937 ETV4P43268 484 aa26.31■■□□□ 1.8
ATPAF1-202ENST00000371937 CLCN5P51795 746 aa26.31■■□□□ 1.8
ATPAF1-202ENST00000371937 USP45Q70EL2 814 aa26.31■■□□□ 1.8
ATPAF1-202ENST00000371937 LYSMD3Q7Z3D4 306 aa26.31■■□□□ 1.8
ATPAF1-202ENST00000371937 ZNF317Q96PQ6 595 aaPredicted RBP26.31■■□□□ 1.8
ATPAF1-202ENST00000371937 OSBPL1AQ9BXW6 950 aa26.31■■□□□ 1.8
ATPAF1-202ENST00000371937 VPS11Q9H270 941 aa26.31■■□□□ 1.8
ATPAF1-202ENST00000371937 DENND4AQ7Z401 1863 aa26.31■■□□□ 1.8
ATPAF1-202ENST00000371937 C1orf232A0A0U1RR37 186 aa26.3■■□□□ 1.8
ATPAF1-202ENST00000371937 S1PR4O95977 384 aa26.3■■□□□ 1.8
ATPAF1-202ENST00000371937 OPRD1P41143 372 aa26.3■■□□□ 1.8
ATPAF1-202ENST00000371937 POU4F1Q01851 419 aa26.3■■□□□ 1.8
ATPAF1-202ENST00000371937 MESP2Q0VG99 397 aa26.3■■□□□ 1.8
ATPAF1-202ENST00000371937 PTPRRQ15256 657 aa26.3■■□□□ 1.8
ATPAF1-202ENST00000371937 ITPRIPL2Q3MIP1 535 aa26.3■■□□□ 1.8
ATPAF1-202ENST00000371937 BRAT1Q6PJG6 821 aa26.3■■□□□ 1.8
ATPAF1-202ENST00000371937 CNSTQ6PJW8 725 aa26.3■■□□□ 1.8
ATPAF1-202ENST00000371937 KYAT3Q6YP21 454 aaKnown RBP26.3■■□□□ 1.8
ATPAF1-202ENST00000371937 ZSWIM9Q86XI8 627 aa26.3■■□□□ 1.8
ATPAF1-202ENST00000371937 UCMAQ8WVF2 138 aa26.3■■□□□ 1.8
ATPAF1-202ENST00000371937 CAB39LQ9H9S4 337 aa26.3■■□□□ 1.8
ATPAF1-202ENST00000371937 TLK1Q9UKI8 766 aa26.3■■□□□ 1.8
ATPAF1-202ENST00000371937 A0A096LPK6 155 aa26.3■■□□□ 1.8
ATPAF1-202ENST00000371937 TBC1D3BA6NDS4 549 aa26.3■■□□□ 1.8
ATPAF1-202ENST00000371937 FAM107AO95990 144 aa26.3■■□□□ 1.8
ATPAF1-202ENST00000371937 GSTA1P08263 222 aa26.3■■□□□ 1.8
ATPAF1-202ENST00000371937 DHRS4L1P0CG22 281 aa26.3■■□□□ 1.8
ATPAF1-202ENST00000371937 PMLP29590 882 aa26.3■■□□□ 1.8
ATPAF1-202ENST00000371937 PDK4Q16654 411 aa26.3■■□□□ 1.8
ATPAF1-202ENST00000371937 PHTF2Q8N3S3 785 aa26.3■■□□□ 1.8
ATPAF1-202ENST00000371937 TTC8Q8TAM2 541 aa26.3■■□□□ 1.8
ATPAF1-202ENST00000371937 GRIN3AQ8TCU5 1115 aa26.3■■□□□ 1.8
ATPAF1-202ENST00000371937 TCF12Q99081 682 aa26.3■■□□□ 1.8
ATPAF1-202ENST00000371937 C12orf65Q9H3J6 166 aaKnown RBP26.3■■□□□ 1.8
ATPAF1-202ENST00000371937 IL36AQ9UHA7 158 aa26.3■■□□□ 1.8
ATPAF1-202ENST00000371937 CD207Q9UJ71 328 aa26.3■■□□□ 1.8
ATPAF1-202ENST00000371937 CORO1CQ9ULV4 474 aaPredicted RBP26.3■■□□□ 1.8
ATPAF1-202ENST00000371937 C5orf42Q9H799 3197 aa26.29■■□□□ 1.8
ATPAF1-202ENST00000371937 STMN1P16949 149 aa26.29■■□□□ 1.8
ATPAF1-202ENST00000371937 SP100P23497 879 aaPredicted RBP26.29■■□□□ 1.8
ATPAF1-202ENST00000371937 SLC12A2P55011 1212 aa26.29■■□□□ 1.8
ATPAF1-202ENST00000371937 FNDC3BQ53EP0 1204 aaKnown RBP26.29■■□□□ 1.8
ATPAF1-202ENST00000371937 TAF1BQ53T94 588 aaPredicted RBP26.29■■□□□ 1.8
ATPAF1-202ENST00000371937 PPM1JQ5JR12 505 aa26.29■■□□□ 1.8
ATPAF1-202ENST00000371937 TPRG1Q6ZUI0 275 aa26.29■■□□□ 1.8
ATPAF1-202ENST00000371937 NUDT18Q6ZVK8 323 aa26.29■■□□□ 1.8
ATPAF1-202ENST00000371937 RAPH1Q70E73 1250 aa26.29■■□□□ 1.8
ATPAF1-202ENST00000371937 GPATCH11Q8N954 259 aa26.29■■□□□ 1.8
ATPAF1-202ENST00000371937 ACVR1CQ8NER5 493 aa26.29■■□□□ 1.8
ATPAF1-202ENST00000371937 ELMO2Q96JJ3 720 aa26.29■■□□□ 1.8
ATPAF1-202ENST00000371937 KLHL32Q96NJ5 620 aa26.29■■□□□ 1.8
ATPAF1-202ENST00000371937 CCT8L2Q96SF2 557 aa26.29■■□□□ 1.8
ATPAF1-202ENST00000371937 BPIFA1Q9NP55 256 aa26.29■■□□□ 1.8
ATPAF1-202ENST00000371937 INTS10Q9NVR2 710 aaKnown RBP26.29■■□□□ 1.8
ATPAF1-202ENST00000371937 FKBPLQ9UIM3 349 aa26.29■■□□□ 1.8
ATPAF1-202ENST00000371937 ANKRD6Q9Y2G4 727 aa26.29■■□□□ 1.8
ATPAF1-202ENST00000371937 WASF2Q9Y6W5 498 aa26.29■■□□□ 1.8
ATPAF1-202ENST00000371937 BPTFQ12830 3046 aa26.29■■□□□ 1.8
ATPAF1-202ENST00000371937 PFDN6O15212 129 aa26.28■■□□□ 1.8
ATPAF1-202ENST00000371937 C2P06681 752 aa26.28■■□□□ 1.8
ATPAF1-202ENST00000371937 VIMP08670 466 aaKnown RBP26.28■■□□□ 1.8
ATPAF1-202ENST00000371937 SAT1P21673 171 aa26.28■■□□□ 1.8
ATPAF1-202ENST00000371937 CRABP2P29373 138 aa26.28■■□□□ 1.8
ATPAF1-202ENST00000371937 STC1P52823 247 aa26.28■■□□□ 1.8
ATPAF1-202ENST00000371937 TYSND1Q2T9J0 566 aa26.28■■□□□ 1.8
ATPAF1-202ENST00000371937 MICALL1Q8N3F8 863 aa26.28■■□□□ 1.8
ATPAF1-202ENST00000371937 SUSD6Q92537 303 aa26.28■■□□□ 1.8
ATPAF1-202ENST00000371937 MCCC1Q96RQ3 725 aaPredicted RBP26.28■■□□□ 1.8
ATPAF1-202ENST00000371937 RPP25Q9BUL9 199 aaKnown RBP26.28■■□□□ 1.8
ATPAF1-202ENST00000371937 VPS9D1Q9Y2B5 631 aa26.28■■□□□ 1.8
ATPAF1-202ENST00000371937 USP15Q9Y4E8 981 aaPredicted RBP26.28■■□□□ 1.8
ATPAF1-202ENST00000371937 NDUFAB1O14561 156 aa26.28■■□□□ 1.8
ATPAF1-202ENST00000371937 LEFTY1O75610 366 aa26.28■■□□□ 1.8
ATPAF1-202ENST00000371937 NFKBIAP25963 317 aa26.28■■□□□ 1.8
ATPAF1-202ENST00000371937 MC4RP32245 332 aa26.28■■□□□ 1.8
ATPAF1-202ENST00000371937 CSRP3P50461 194 aa26.28■■□□□ 1.8
ATPAF1-202ENST00000371937 RAB10P61026 200 aa26.28■■□□□ 1.8
ATPAF1-202ENST00000371937 CDKN3Q16667 212 aa26.28■■□□□ 1.8
ATPAF1-202ENST00000371937 ZNF789Q5FWF6 425 aa26.28■■□□□ 1.8
ATPAF1-202ENST00000371937 ARSIQ5FYB1 569 aa26.28■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms