RNA–Protein interactions for RNA: ENST00000371447.3

PDE6C-201, Transcript of phosphodiesterase 6C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDE6C, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6C-201ENST00000371447 ZNF683Q8IZ20 524 aa11.76□□□□□ -0.53
PDE6C-201ENST00000371447 OR4L1Q8NH43 312 aa11.76□□□□□ -0.53
PDE6C-201ENST00000371447 MYLIPQ8WY64 445 aa11.76□□□□□ -0.53
PDE6C-201ENST00000371447 CATSPERZQ9NTU4 200 aa11.76□□□□□ -0.53
PDE6C-201ENST00000371447 ADAMTS6Q9UKP5 1117 aa11.76□□□□□ -0.53
PDE6C-201ENST00000371447 A0A1B0GTL3 188 aa11.76□□□□□ -0.53
PDE6C-201ENST00000371447 DPPA5A6NC42 116 aa11.76□□□□□ -0.53
PDE6C-201ENST00000371447 CACNG3O60359 315 aa11.76□□□□□ -0.53
PDE6C-201ENST00000371447 DNAJA2O60884 412 aa11.76□□□□□ -0.53
PDE6C-201ENST00000371447 TBL1XO60907 577 aa11.76□□□□□ -0.53
PDE6C-201ENST00000371447 NIPSNAP2O75323 286 aa11.76□□□□□ -0.53
PDE6C-201ENST00000371447 THRAP10827 490 aa11.76□□□□□ -0.53
PDE6C-201ENST00000371447 FGFR3P22607 806 aa11.76□□□□□ -0.53
PDE6C-201ENST00000371447 PPARGP37231 505 aaPredicted RBP11.76□□□□□ -0.53
PDE6C-201ENST00000371447 ALDH1A3P47895 512 aa11.76□□□□□ -0.53
PDE6C-201ENST00000371447 RAP1GDS1P52306 607 aa11.76□□□□□ -0.53
PDE6C-201ENST00000371447 FOXA1P55317 472 aa11.76□□□□□ -0.53
PDE6C-201ENST00000371447 FAM189BP81408 668 aa11.76□□□□□ -0.53
PDE6C-201ENST00000371447 ANKS3Q6ZW76 656 aa11.76□□□□□ -0.53
PDE6C-201ENST00000371447 SEMA6AQ9H2E6 1030 aa11.76□□□□□ -0.53
PDE6C-201ENST00000371447 WDR41Q9HAD4 459 aa11.76□□□□□ -0.53
PDE6C-201ENST00000371447 CLIC5Q9NZA1 410 aa11.76□□□□□ -0.53
PDE6C-201ENST00000371447 TRPM5Q9NZQ8 1165 aa11.76□□□□□ -0.53
PDE6C-201ENST00000371447 AGO1Q9UL18 857 aaKnown RBP11.76□□□□□ -0.53
PDE6C-201ENST00000371447 TRPM7Q96QT4 1865 aa11.76□□□□□ -0.53
PDE6C-201ENST00000371447 RGSL1A5PLK6 1076 aa11.76□□□□□ -0.53
PDE6C-201ENST00000371447 CDC7O00311 574 aa11.76□□□□□ -0.53
PDE6C-201ENST00000371447 UBFD1O14562 309 aaKnown RBP11.76□□□□□ -0.53
PDE6C-201ENST00000371447 PRAMEF11O60813 436 aa11.76□□□□□ -0.53
PDE6C-201ENST00000371447 AGTR2P50052 363 aa11.76□□□□□ -0.53
PDE6C-201ENST00000371447 IL10RBQ08334 325 aa11.76□□□□□ -0.53
PDE6C-201ENST00000371447 TSNQ15631 228 aaKnown RBP11.76□□□□□ -0.53
PDE6C-201ENST00000371447 PLA2G4EQ3MJ16 856 aa11.76□□□□□ -0.53
PDE6C-201ENST00000371447 MRNIPQ6NTE8 343 aa11.76□□□□□ -0.53
PDE6C-201ENST00000371447 PAOXQ6QHF9 649 aa11.76□□□□□ -0.53
PDE6C-201ENST00000371447 BBS5Q8N3I7 341 aa11.76□□□□□ -0.53
PDE6C-201ENST00000371447 FBXW8Q8N3Y1 598 aa11.76□□□□□ -0.53
PDE6C-201ENST00000371447 CDKN2AIPNLQ96HQ2 116 aa11.76□□□□□ -0.53
PDE6C-201ENST00000371447 PRICKLE1Q96MT3 831 aaPredicted RBP11.76□□□□□ -0.53
PDE6C-201ENST00000371447 CDK15Q96Q40 435 aa11.76□□□□□ -0.53
PDE6C-201ENST00000371447 GCNAQ96QF7 691 aa11.76□□□□□ -0.53
PDE6C-201ENST00000371447 MMADHCQ9H3L0 296 aaPredicted RBP11.76□□□□□ -0.53
PDE6C-201ENST00000371447 COPS7BQ9H9Q2 264 aaPredicted RBP11.76□□□□□ -0.53
PDE6C-201ENST00000371447 LRRC42Q9Y546 428 aa11.76□□□□□ -0.53
PDE6C-201ENST00000371447 BTN3A1O00481 513 aa11.75□□□□□ -0.53
PDE6C-201ENST00000371447 UBDO15205 165 aa11.75□□□□□ -0.53
PDE6C-201ENST00000371447 PRAMEF12O95522 483 aa11.75□□□□□ -0.53
PDE6C-201ENST00000371447 RPLP2P05387 115 aaKnown RBP11.75□□□□□ -0.53
PDE6C-201ENST00000371447 KLC1Q07866 573 aa11.75□□□□□ -0.53
PDE6C-201ENST00000371447 RPS6KA2Q15349 733 aa11.75□□□□□ -0.53
PDE6C-201ENST00000371447 OR4D1Q15615 310 aa11.75□□□□□ -0.53
PDE6C-201ENST00000371447 TBCCQ15814 346 aa11.75□□□□□ -0.53
PDE6C-201ENST00000371447 TECRLQ5HYJ1 363 aa11.75□□□□□ -0.53
PDE6C-201ENST00000371447 AFMIDQ63HM1 303 aa11.75□□□□□ -0.53
PDE6C-201ENST00000371447 CAPRIN2Q6IMN6 1127 aaKnown RBP11.75□□□□□ -0.53
PDE6C-201ENST00000371447 RNF111Q6ZNA4 994 aa11.75□□□□□ -0.53
PDE6C-201ENST00000371447 PIANPQ8IYJ0 282 aa11.75□□□□□ -0.53
PDE6C-201ENST00000371447 SIDT2Q8NBJ9 832 aaKnown RBP11.75□□□□□ -0.53
PDE6C-201ENST00000371447 BHLHE22Q8NFJ8 381 aaPredicted RBP11.75□□□□□ -0.53
PDE6C-201ENST00000371447 GDPD5Q8WTR4 605 aa11.75□□□□□ -0.53
PDE6C-201ENST00000371447 C3orf30Q96M34 536 aa11.75□□□□□ -0.53
PDE6C-201ENST00000371447 ZNF184Q99676 751 aaPredicted RBP11.75□□□□□ -0.53
PDE6C-201ENST00000371447 GPR21Q99679 349 aa11.75□□□□□ -0.53
PDE6C-201ENST00000371447 TNKS2Q9H2K2 1166 aa11.75□□□□□ -0.53
PDE6C-201ENST00000371447 S100A14Q9HCY8 104 aa11.75□□□□□ -0.53
PDE6C-201ENST00000371447 VPS45Q9NRW7 570 aa11.75□□□□□ -0.53
PDE6C-201ENST00000371447 TRAF6Q9Y4K3 522 aa11.75□□□□□ -0.53
PDE6C-201ENST00000371447 V9GYQ6 96 aa11.75□□□□□ -0.53
PDE6C-201ENST00000371447 ZNF840PA6NDX5 716 aa11.75□□□□□ -0.53
PDE6C-201ENST00000371447 TARM1B6A8C7 271 aa11.75□□□□□ -0.53
PDE6C-201ENST00000371447 SDHDO14521 159 aa11.75□□□□□ -0.53
PDE6C-201ENST00000371447 ACRP10323 421 aa11.75□□□□□ -0.53
PDE6C-201ENST00000371447 CLCN5P51795 746 aa11.75□□□□□ -0.53
PDE6C-201ENST00000371447 CYP4F8P98187 520 aa11.75□□□□□ -0.53
PDE6C-201ENST00000371447 MS4A2Q01362 244 aa11.75□□□□□ -0.53
PDE6C-201ENST00000371447 TLE2Q04725 743 aa11.75□□□□□ -0.53
PDE6C-201ENST00000371447 PARP15Q460N3 678 aa11.75□□□□□ -0.53
PDE6C-201ENST00000371447 BNC2Q6ZN30 1099 aaPredicted RBP11.75□□□□□ -0.53
PDE6C-201ENST00000371447 ISCA2Q86U28 154 aa11.75□□□□□ -0.53
PDE6C-201ENST00000371447 ISL2Q96A47 359 aa11.75□□□□□ -0.53
PDE6C-201ENST00000371447 TUBGCP3Q96CW5 907 aa11.75□□□□□ -0.53
PDE6C-201ENST00000371447 MCMBPQ9BTE3 642 aa11.75□□□□□ -0.53
PDE6C-201ENST00000371447 EBF3Q9H4W6 596 aa11.75□□□□□ -0.53
PDE6C-201ENST00000371447 OLA1Q9NTK5 396 aaKnown RBP11.75□□□□□ -0.53
PDE6C-201ENST00000371447 RNF112Q9ULX5 631 aa11.75□□□□□ -0.53
PDE6C-201ENST00000371447 RAI2Q9Y5P3 530 aa11.75□□□□□ -0.53
PDE6C-201ENST00000371447 TSC2P49815 1807 aa11.75□□□□□ -0.53
PDE6C-201ENST00000371447 A0A087X1B8 175 aa11.75□□□□□ -0.53
PDE6C-201ENST00000371447 NPEPPSL1A6NEC2 478 aa11.75□□□□□ -0.53
PDE6C-201ENST00000371447 CAPN8A6NHC0 703 aa11.75□□□□□ -0.53
PDE6C-201ENST00000371447 ENO4A6NNW6 628 aa11.75□□□□□ -0.53
PDE6C-201ENST00000371447 NR5A2O00482 541 aa11.75□□□□□ -0.53
PDE6C-201ENST00000371447 KIF1CO43896 1103 aaKnown RBP11.75□□□□□ -0.53
PDE6C-201ENST00000371447 TPST1O60507 370 aa11.75□□□□□ -0.53
PDE6C-201ENST00000371447 STC2O76061 302 aa11.75□□□□□ -0.53
PDE6C-201ENST00000371447 GUCA1CO95843 209 aa11.75□□□□□ -0.53
PDE6C-201ENST00000371447 CKMP06732 381 aa11.75□□□□□ -0.53
PDE6C-201ENST00000371447 HOXD9P28356 352 aaPredicted RBP11.75□□□□□ -0.53
PDE6C-201ENST00000371447 DPP6P42658 865 aa11.75□□□□□ -0.53
PDE6C-201ENST00000371447 CREB5Q02930 508 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms