RNA–Protein interactions for RNA: ENST00000371319.7

SSBP3-203, Transcript of single stranded DNA binding protein 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SSBP3, Length 1,578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-203ENST00000371319 G3V2L1 256 aa17.53■□□□□ 0.4
SSBP3-203ENST00000371319 WISP3O95389 354 aaPredicted RBP17.53■□□□□ 0.4
SSBP3-203ENST00000371319 TRBC1P01850 177 aa17.53■□□□□ 0.4
SSBP3-203ENST00000371319 ARSAP15289 507 aa17.53■□□□□ 0.4
SSBP3-203ENST00000371319 CDKN3Q16667 212 aa17.53■□□□□ 0.4
SSBP3-203ENST00000371319 ATG16L1Q676U5 607 aa17.53■□□□□ 0.4
SSBP3-203ENST00000371319 ZNF549Q6P9A3 640 aa17.53■□□□□ 0.4
SSBP3-203ENST00000371319 SYCE2Q6PIF2 218 aa17.53■□□□□ 0.4
SSBP3-203ENST00000371319 GET4Q7L5D6 327 aaPredicted RBP17.53■□□□□ 0.4
SSBP3-203ENST00000371319 LYSMD3Q7Z3D4 306 aa17.53■□□□□ 0.4
SSBP3-203ENST00000371319 C12orf40Q86WS4 652 aa17.53■□□□□ 0.4
SSBP3-203ENST00000371319 C10orf107Q8IVU9 208 aa17.53■□□□□ 0.4
SSBP3-203ENST00000371319 THOC1Q96FV9 657 aaKnown RBP17.53■□□□□ 0.4
SSBP3-203ENST00000371319 MRGPRX3Q96LB0 322 aa17.53■□□□□ 0.4
SSBP3-203ENST00000371319 GPR78Q96P69 363 aa17.53■□□□□ 0.4
SSBP3-203ENST00000371319 NMRAL1Q9HBL8 299 aa17.53■□□□□ 0.4
SSBP3-203ENST00000371319 BPIFA1Q9NP55 256 aa17.53■□□□□ 0.4
SSBP3-203ENST00000371319 IL17CQ9P0M4 197 aa17.53■□□□□ 0.4
SSBP3-203ENST00000371319 COPG2Q9UBF2 871 aa17.53■□□□□ 0.4
SSBP3-203ENST00000371319 ACOT9Q9Y305 439 aa17.53■□□□□ 0.4
SSBP3-203ENST00000371319 H7C0S8 307 aa17.53■□□□□ 0.4
SSBP3-203ENST00000371319 STX7O15400 261 aaKnown RBP17.53■□□□□ 0.4
SSBP3-203ENST00000371319 SNNO75324 88 aaPredicted RBP17.53■□□□□ 0.4
SSBP3-203ENST00000371319 CPA3P15088 417 aa17.53■□□□□ 0.4
SSBP3-203ENST00000371319 POLR2EP19388 210 aaKnown RBP17.53■□□□□ 0.4
SSBP3-203ENST00000371319 KCNA4P22459 653 aa17.53■□□□□ 0.4
SSBP3-203ENST00000371319 FCARP24071 287 aa17.53■□□□□ 0.4
SSBP3-203ENST00000371319 SERPINA4P29622 427 aa17.53■□□□□ 0.4
SSBP3-203ENST00000371319 CCNHP51946 323 aaPredicted RBP17.53■□□□□ 0.4
SSBP3-203ENST00000371319 STC1P52823 247 aa17.53■□□□□ 0.4
SSBP3-203ENST00000371319 OCRLQ01968 901 aa17.53■□□□□ 0.4
SSBP3-203ENST00000371319 ILF2Q12905 390 aaKnown RBP17.53■□□□□ 0.4
SSBP3-203ENST00000371319 PEX6Q13608 980 aa17.53■□□□□ 0.4
SSBP3-203ENST00000371319 ANKRD54Q6NXT1 300 aa17.53■□□□□ 0.4
SSBP3-203ENST00000371319 SPNS2Q8IVW8 549 aa17.53■□□□□ 0.4
SSBP3-203ENST00000371319 TMEM151AQ8N4L1 468 aa17.53■□□□□ 0.4
SSBP3-203ENST00000371319 C10orf82Q8WW14 230 aa17.53■□□□□ 0.4
SSBP3-203ENST00000371319 ECHDC3Q96DC8 303 aa17.53■□□□□ 0.4
SSBP3-203ENST00000371319 CPEB1Q9BZB8 566 aaKnown RBP17.53■□□□□ 0.4
SSBP3-203ENST00000371319 TRPV4Q9HBA0 871 aa17.53■□□□□ 0.4
SSBP3-203ENST00000371319 GDE1Q9NZC3 331 aa17.53■□□□□ 0.4
SSBP3-203ENST00000371319 KLHL14Q9P2G3 628 aa17.53■□□□□ 0.4
SSBP3-203ENST00000371319 CORO1CQ9ULV4 474 aaPredicted RBP17.53■□□□□ 0.4
SSBP3-203ENST00000371319 RUVBL2Q9Y230 463 aaKnown RBP17.53■□□□□ 0.4
SSBP3-203ENST00000371319 VWA7Q9Y334 891 aa17.53■□□□□ 0.4
SSBP3-203ENST00000371319 COL4A3Q01955 1670 aa17.52■□□□□ 0.4
SSBP3-203ENST00000371319 CCT8L1PA6NM43 557 aa17.52■□□□□ 0.39
SSBP3-203ENST00000371319 HEPACAM2A8MVW5 462 aa17.52■□□□□ 0.39
SSBP3-203ENST00000371319 ADH1CP00326 375 aa17.52■□□□□ 0.39
SSBP3-203ENST00000371319 SBK3P0C264 359 aa17.52■□□□□ 0.39
SSBP3-203ENST00000371319 MC4RP32245 332 aa17.52■□□□□ 0.39
SSBP3-203ENST00000371319 HNF1BP35680 557 aa17.52■□□□□ 0.39
SSBP3-203ENST00000371319 CDKN1CP49918 316 aaPredicted RBP17.52■□□□□ 0.39
SSBP3-203ENST00000371319 SLC12A2P55011 1212 aa17.52■□□□□ 0.39
SSBP3-203ENST00000371319 CDKN2DP55273 166 aa17.52■□□□□ 0.39
SSBP3-203ENST00000371319 XIAPP98170 497 aa17.52■□□□□ 0.39
SSBP3-203ENST00000371319 TIAL1Q01085 375 aaKnown RBP eCLIP17.52■□□□□ 0.393e-6■■■■□ 20.6
SSBP3-203ENST00000371319 OVGP1Q12889 678 aa17.52■□□□□ 0.39
SSBP3-203ENST00000371319 GAB4Q2WGN9 574 aa17.52■□□□□ 0.39
SSBP3-203ENST00000371319 ACCSLQ4AC99 568 aa17.52■□□□□ 0.39
SSBP3-203ENST00000371319 FAM45BPQ6NSW5 357 aa17.52■□□□□ 0.39
SSBP3-203ENST00000371319 DPY19L3Q6ZPD9 716 aa17.52■□□□□ 0.39
SSBP3-203ENST00000371319 ZCCHC23Q6ZST2 131 aa17.52■□□□□ 0.39
SSBP3-203ENST00000371319 SDCCAG8Q86SQ7 713 aaPredicted RBP17.52■□□□□ 0.39
SSBP3-203ENST00000371319 PLPP6Q8IY26 295 aa17.52■□□□□ 0.39
SSBP3-203ENST00000371319 TNS4Q8IZW8 715 aa17.52■□□□□ 0.39
SSBP3-203ENST00000371319 CHST14Q8NCH0 376 aa17.52■□□□□ 0.39
SSBP3-203ENST00000371319 FAM45AQ8TCE6 357 aa17.52■□□□□ 0.39
SSBP3-203ENST00000371319 FRS2Q8WU20 508 aa17.52■□□□□ 0.39
SSBP3-203ENST00000371319 CYB5D2Q8WUJ1 264 aa17.52■□□□□ 0.39
SSBP3-203ENST00000371319 SCG3Q8WXD2 468 aaKnown RBP17.52■□□□□ 0.39
SSBP3-203ENST00000371319 PPP2R3CQ969Q6 453 aa17.52■□□□□ 0.39
SSBP3-203ENST00000371319 NXNL1Q96CM4 212 aa17.52■□□□□ 0.39
SSBP3-203ENST00000371319 TSPAN17Q96FV3 270 aa17.52■□□□□ 0.39
SSBP3-203ENST00000371319 C7orf26Q96N11 449 aa17.52■□□□□ 0.39
SSBP3-203ENST00000371319 GPR63Q9BZJ6 419 aa17.52■□□□□ 0.39
SSBP3-203ENST00000371319 NSUN3Q9H649 340 aaKnown RBP17.52■□□□□ 0.39
SSBP3-203ENST00000371319 ZNF395Q9H8N7 513 aaPredicted RBP17.52■□□□□ 0.39
SSBP3-203ENST00000371319 IGSF5Q9NSI5 407 aa17.52■□□□□ 0.39
SSBP3-203ENST00000371319 INTS10Q9NVR2 710 aaKnown RBP17.52■□□□□ 0.39
SSBP3-203ENST00000371319 OBP2AQ9NY56 170 aa17.52■□□□□ 0.39
SSBP3-203ENST00000371319 CRYL1Q9Y2S2 319 aa17.52■□□□□ 0.39
SSBP3-203ENST00000371319 CAPN8A6NHC0 703 aa17.51■□□□□ 0.39
SSBP3-203ENST00000371319 WASH3PC4AMC7 463 aa17.51■□□□□ 0.39
SSBP3-203ENST00000371319 DNAJC6O75061 913 aa17.51■□□□□ 0.39
SSBP3-203ENST00000371319 KLHL2O95198 593 aa17.51■□□□□ 0.39
SSBP3-203ENST00000371319 TGDSO95455 350 aa17.51■□□□□ 0.39
SSBP3-203ENST00000371319 POP4O95707 220 aaKnown RBP17.51■□□□□ 0.39
SSBP3-203ENST00000371319 APOA4P06727 396 aa17.51■□□□□ 0.39
SSBP3-203ENST00000371319 FDXRP22570 491 aa17.51■□□□□ 0.39
SSBP3-203ENST00000371319 HMGCLP35914 325 aa17.51■□□□□ 0.39
SSBP3-203ENST00000371319 DGKGP49619 791 aa17.51■□□□□ 0.39
SSBP3-203ENST00000371319 VASPP50552 380 aaPredicted RBP17.51■□□□□ 0.39
SSBP3-203ENST00000371319 STX3Q13277 289 aa17.51■□□□□ 0.39
SSBP3-203ENST00000371319 LRRC8EQ6NSJ5 796 aa17.51■□□□□ 0.39
SSBP3-203ENST00000371319 Q6ZVU0 165 aa17.51■□□□□ 0.39
SSBP3-203ENST00000371319 YTHDF3Q7Z739 585 aaKnown RBP17.51■□□□□ 0.39
SSBP3-203ENST00000371319 ETFBKMTQ8IXQ9 262 aa17.51■□□□□ 0.39
SSBP3-203ENST00000371319 OR6Y1Q8NGX8 325 aa17.51■□□□□ 0.39
SSBP3-203ENST00000371319 RFWD2Q8NHY2 731 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms