RNA–Protein interactions for RNA: ENST00000368908.9

LYSMD1-201, Transcript of LysM domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LYSMD1, Length 2,479 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD1-201ENST00000368908 TRIM54Q9BYV2 358 aa10.54□□□□□ -0.72
LYSMD1-201ENST00000368908 TPK1Q9H3S4 243 aa10.54□□□□□ -0.72
LYSMD1-201ENST00000368908 CMTM6Q9NX76 183 aa10.54□□□□□ -0.72
LYSMD1-201ENST00000368908 DNMT3BQ9UBC3 853 aaKnown RBP10.54□□□□□ -0.72
LYSMD1-201ENST00000368908 ANAPC2Q9UJX6 822 aa10.54□□□□□ -0.72
LYSMD1-201ENST00000368908 ADAMTS5Q9UNA0 930 aa10.54□□□□□ -0.72
LYSMD1-201ENST00000368908 TSC2P49815 1807 aa10.54□□□□□ -0.72
LYSMD1-201ENST00000368908 A0A0J9YYE9 177 aa10.53□□□□□ -0.72
LYSMD1-201ENST00000368908 MSI1O43347 362 aaKnown RBP10.53□□□□□ -0.72
LYSMD1-201ENST00000368908 SYNCRIPO60506 623 aaKnown RBP10.53□□□□□ -0.72
LYSMD1-201ENST00000368908 IPO13O94829 963 aaKnown RBP10.53□□□□□ -0.72
LYSMD1-201ENST00000368908 MATN4O95460 622 aa10.53□□□□□ -0.72
LYSMD1-201ENST00000368908 SNAP29O95721 258 aa10.53□□□□□ -0.72
LYSMD1-201ENST00000368908 NCAM1P13591 858 aa10.53□□□□□ -0.72
LYSMD1-201ENST00000368908 SAT1P21673 171 aa10.53□□□□□ -0.72
LYSMD1-201ENST00000368908 UBA1P22314 1058 aaKnown RBP10.53□□□□□ -0.72
LYSMD1-201ENST00000368908 NFKBIAP25963 317 aa10.53□□□□□ -0.72
LYSMD1-201ENST00000368908 NOS2P35228 1153 aa10.53□□□□□ -0.72
LYSMD1-201ENST00000368908 MATKP42679 507 aa10.53□□□□□ -0.72
LYSMD1-201ENST00000368908 PLA2G16P53816 162 aa10.53□□□□□ -0.72
LYSMD1-201ENST00000368908 MBTD1Q05BQ5 628 aa10.53□□□□□ -0.72
LYSMD1-201ENST00000368908 BST2Q10589 180 aaKnown RBP10.53□□□□□ -0.72
LYSMD1-201ENST00000368908 FAM187BQ17R55 369 aa10.53□□□□□ -0.72
LYSMD1-201ENST00000368908 SLC25A52Q3SY17 297 aa10.53□□□□□ -0.72
LYSMD1-201ENST00000368908 SLC16A12Q6ZSM3 486 aa10.53□□□□□ -0.72
LYSMD1-201ENST00000368908 TMEM130Q8N3G9 435 aa10.53□□□□□ -0.72
LYSMD1-201ENST00000368908 BPIFB6Q8NFQ5 453 aa10.53□□□□□ -0.72
LYSMD1-201ENST00000368908 DNERQ8NFT8 737 aa10.53□□□□□ -0.72
LYSMD1-201ENST00000368908 OR9I1Q8NGQ6 314 aa10.53□□□□□ -0.72
LYSMD1-201ENST00000368908 TSPEARQ8WU66 669 aa10.53□□□□□ -0.72
LYSMD1-201ENST00000368908 HEXDCQ8WVB3 486 aa10.53□□□□□ -0.72
LYSMD1-201ENST00000368908 HPS1Q92902 700 aa10.53□□□□□ -0.72
LYSMD1-201ENST00000368908 MUL1Q969V5 352 aa10.53□□□□□ -0.72
LYSMD1-201ENST00000368908 NSMCE3Q96MG7 304 aa10.53□□□□□ -0.72
LYSMD1-201ENST00000368908 RDH12Q96NR8 316 aa10.53□□□□□ -0.72
LYSMD1-201ENST00000368908 NFKBIZQ9BYH8 718 aa10.53□□□□□ -0.72
LYSMD1-201ENST00000368908 HPS4Q9NQG7 708 aa10.53□□□□□ -0.72
LYSMD1-201ENST00000368908 IGSF5Q9NSI5 407 aa10.53□□□□□ -0.72
LYSMD1-201ENST00000368908 THG1LQ9NWX6 298 aaKnown RBP10.53□□□□□ -0.72
LYSMD1-201ENST00000368908 ZNF214Q9UL59 606 aaPredicted RBP10.53□□□□□ -0.72
LYSMD1-201ENST00000368908 ABT1Q9ULW3 272 aaKnown RBP10.53□□□□□ -0.72
LYSMD1-201ENST00000368908 PCDHA9Q9Y5H5 950 aa10.53□□□□□ -0.72
LYSMD1-201ENST00000368908 A8MT66 165 aa10.53□□□□□ -0.72
LYSMD1-201ENST00000368908 INO80B-WBP1J3KQ70 363 aa10.53□□□□□ -0.72
LYSMD1-201ENST00000368908 TPST1O60507 370 aa10.53□□□□□ -0.72
LYSMD1-201ENST00000368908 DAB1O75553 588 aa10.53□□□□□ -0.72
LYSMD1-201ENST00000368908 CRHBPP24387 322 aa10.53□□□□□ -0.72
LYSMD1-201ENST00000368908 EEF1B2P24534 225 aaKnown RBP10.53□□□□□ -0.72
LYSMD1-201ENST00000368908 CD68P34810 354 aaPredicted RBP10.53□□□□□ -0.72
LYSMD1-201ENST00000368908 YAP1P46937 504 aaKnown RBP10.53□□□□□ -0.72
LYSMD1-201ENST00000368908 KPNA1P52294 538 aaPredicted RBP10.53□□□□□ -0.72
LYSMD1-201ENST00000368908 HUNKP57058 714 aa10.53□□□□□ -0.72
LYSMD1-201ENST00000368908 POU4F1Q01851 419 aa10.53□□□□□ -0.72
LYSMD1-201ENST00000368908 PRPSAP1Q14558 356 aa10.53□□□□□ -0.72
LYSMD1-201ENST00000368908 SPCS2Q15005 226 aa10.53□□□□□ -0.72
LYSMD1-201ENST00000368908 CYP51A1Q16850 503 aa10.53□□□□□ -0.72
LYSMD1-201ENST00000368908 RGMBQ6NW40 437 aa10.53□□□□□ -0.72
LYSMD1-201ENST00000368908 BNIPLQ7Z465 357 aa10.53□□□□□ -0.72
LYSMD1-201ENST00000368908 FAM131BQ86XD5 332 aa10.53□□□□□ -0.72
LYSMD1-201ENST00000368908 CCDC117Q8IWD4 279 aaPredicted RBP10.53□□□□□ -0.72
LYSMD1-201ENST00000368908 CLEC4CQ8WTT0 213 aa10.53□□□□□ -0.72
LYSMD1-201ENST00000368908 OMDQ99983 421 aa10.53□□□□□ -0.72
LYSMD1-201ENST00000368908 KLHL25Q9H0H3 589 aa10.53□□□□□ -0.72
LYSMD1-201ENST00000368908 VTA1Q9NP79 307 aa10.53□□□□□ -0.72
LYSMD1-201ENST00000368908 TNFRSF12AQ9NP84 129 aa10.53□□□□□ -0.72
LYSMD1-201ENST00000368908 FBXO8Q9NRD0 319 aa10.53□□□□□ -0.72
LYSMD1-201ENST00000368908 PRMT7Q9NVM4 692 aaPredicted RBP10.53□□□□□ -0.72
LYSMD1-201ENST00000368908 IFT52Q9Y366 437 aa10.53□□□□□ -0.72
LYSMD1-201ENST00000368908 FIS1Q9Y3D6 152 aa10.53□□□□□ -0.72
LYSMD1-201ENST00000368908 MKI67P46013 3256 aaKnown RBP10.53□□□□□ -0.72
LYSMD1-201ENST00000368908 H0Y858 1186 aa10.52□□□□□ -0.72
LYSMD1-201ENST00000368908 KCNK1O00180 336 aa10.52□□□□□ -0.72
LYSMD1-201ENST00000368908 EEF2KO00418 725 aaKnown RBP10.52□□□□□ -0.72
LYSMD1-201ENST00000368908 NR5A2O00482 541 aa10.52□□□□□ -0.72
LYSMD1-201ENST00000368908 ANGPT2O15123 496 aa10.52□□□□□ -0.72
LYSMD1-201ENST00000368908 ZBTB24O43167 697 aaPredicted RBP10.52□□□□□ -0.72
LYSMD1-201ENST00000368908 UGT2B11O75310 529 aa10.52□□□□□ -0.72
LYSMD1-201ENST00000368908 BCAS1O75363 584 aaPredicted RBP10.52□□□□□ -0.72
LYSMD1-201ENST00000368908 KCNH1O95259 989 aa10.52□□□□□ -0.72
LYSMD1-201ENST00000368908 HPRP00739 348 aa10.52□□□□□ -0.72
LYSMD1-201ENST00000368908 ALDOCP09972 364 aaKnown RBP10.52□□□□□ -0.72
LYSMD1-201ENST00000368908 SLC6A2P23975 617 aa10.52□□□□□ -0.72
LYSMD1-201ENST00000368908 SULT1E1P49888 294 aa10.52□□□□□ -0.72
LYSMD1-201ENST00000368908 MAPK10P53779 464 aa10.52□□□□□ -0.72
LYSMD1-201ENST00000368908 BCAT1P54687 386 aa10.52□□□□□ -0.72
LYSMD1-201ENST00000368908 RAD23AP54725 363 aa10.52□□□□□ -0.72
LYSMD1-201ENST00000368908 CDC20Q12834 499 aa10.52□□□□□ -0.72
LYSMD1-201ENST00000368908 TOP3AQ13472 1001 aaPredicted RBP10.52□□□□□ -0.72
LYSMD1-201ENST00000368908 AQP6Q13520 282 aa10.52□□□□□ -0.72
LYSMD1-201ENST00000368908 CRY1Q16526 586 aa10.52□□□□□ -0.72
LYSMD1-201ENST00000368908 AASDHQ4L235 1098 aaPredicted RBP10.52□□□□□ -0.72
LYSMD1-201ENST00000368908 IQSEC1Q6DN90 963 aa10.52□□□□□ -0.72
LYSMD1-201ENST00000368908 CYHR1Q6ZMK1 362 aa10.52□□□□□ -0.72
LYSMD1-201ENST00000368908 PLEKHG7Q6ZR37 379 aa10.52□□□□□ -0.72
LYSMD1-201ENST00000368908 NANOGNBQ7Z5D8 188 aa10.52□□□□□ -0.72
LYSMD1-201ENST00000368908 THAP5Q7Z6K1 395 aa10.52□□□□□ -0.72
LYSMD1-201ENST00000368908 ACOT1Q86TX2 421 aa10.52□□□□□ -0.72
LYSMD1-201ENST00000368908 UNC93AQ86WB7 457 aa10.52□□□□□ -0.72
LYSMD1-201ENST00000368908 MFSD6LQ8IWD5 586 aa10.52□□□□□ -0.72
LYSMD1-201ENST00000368908 SPARTQ8N0X7 666 aa10.52□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms