RNA–Protein interactions for RNA: ENST00000368662.9

TUBE1-202, Transcript of tubulin epsilon 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBE1, Length 2,142 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-202ENST00000368662 CDKN3Q16667 212 aa12.32□□□□□ -0.44
TUBE1-202ENST00000368662 ZDHHC20Q5W0Z9 365 aa12.32□□□□□ -0.44
TUBE1-202ENST00000368662 CRTC1Q6UUV9 634 aa12.32□□□□□ -0.44
TUBE1-202ENST00000368662 ERN2Q76MJ5 926 aaKnown RBP12.32□□□□□ -0.44
TUBE1-202ENST00000368662 MARK2Q7KZI7 788 aaKnown RBP12.32□□□□□ -0.44
TUBE1-202ENST00000368662 DPPA4Q7L190 304 aa12.32□□□□□ -0.44
TUBE1-202ENST00000368662 LYSMD3Q7Z3D4 306 aa12.32□□□□□ -0.44
TUBE1-202ENST00000368662 SLC26A11Q86WA9 606 aa12.32□□□□□ -0.44
TUBE1-202ENST00000368662 RASSF3Q86WH2 238 aa12.32□□□□□ -0.44
TUBE1-202ENST00000368662 RAVER1Q8IY67 606 aaKnown RBP12.32□□□□□ -0.44
TUBE1-202ENST00000368662 OR4K2Q8NGD2 314 aa12.32□□□□□ -0.44
TUBE1-202ENST00000368662 SLC44A1Q8WWI5 657 aa12.32□□□□□ -0.44
TUBE1-202ENST00000368662 DNAJC1Q96KC8 554 aaKnown RBP12.32□□□□□ -0.44
TUBE1-202ENST00000368662 SH3GL2Q99962 352 aa12.32□□□□□ -0.44
TUBE1-202ENST00000368662 STMN4Q9H169 189 aaPredicted RBP12.32□□□□□ -0.44
TUBE1-202ENST00000368662 MFSD1Q9H3U5 465 aa12.32□□□□□ -0.44
TUBE1-202ENST00000368662 PCDH12Q9NPG4 1184 aa12.32□□□□□ -0.44
TUBE1-202ENST00000368662 IL17CQ9P0M4 197 aa12.32□□□□□ -0.44
TUBE1-202ENST00000368662 TXNDC16Q9P2K2 825 aa12.32□□□□□ -0.44
TUBE1-202ENST00000368662 PSMC3IPQ9P2W1 217 aaPredicted RBP12.32□□□□□ -0.44
TUBE1-202ENST00000368662 B4GALT6Q9UBX8 382 aa12.32□□□□□ -0.44
TUBE1-202ENST00000368662 MMP17Q9ULZ9 603 aa12.32□□□□□ -0.44
TUBE1-202ENST00000368662 H7C0S8 307 aa12.32□□□□□ -0.44
TUBE1-202ENST00000368662 ERVK-10P10266 1014 aa12.32□□□□□ -0.44
TUBE1-202ENST00000368662 HSP90AA5PQ58FG0 334 aa12.32□□□□□ -0.44
TUBE1-202ENST00000368662 LRRC66Q68CR7 880 aa12.32□□□□□ -0.44
TUBE1-202ENST00000368662 CNTN4Q8IWV2 1026 aa12.32□□□□□ -0.44
TUBE1-202ENST00000368662 CBARPQ8N350 705 aaPredicted RBP12.32□□□□□ -0.44
TUBE1-202ENST00000368662 PPM1NQ8N819 430 aa12.32□□□□□ -0.44
TUBE1-202ENST00000368662 OR13C4Q8NGS5 318 aa12.32□□□□□ -0.44
TUBE1-202ENST00000368662 EPS8L3Q8TE67 593 aaKnown RBP12.32□□□□□ -0.44
TUBE1-202ENST00000368662 HDAC10Q969S8 669 aa12.32□□□□□ -0.44
TUBE1-202ENST00000368662 PBXIP1Q96AQ6 731 aa12.32□□□□□ -0.44
TUBE1-202ENST00000368662 PGM2Q96G03 612 aa12.32□□□□□ -0.44
TUBE1-202ENST00000368662 CDKN2AIPNLQ96HQ2 116 aa12.32□□□□□ -0.44
TUBE1-202ENST00000368662 SGSM3Q96HU1 749 aa12.32□□□□□ -0.44
TUBE1-202ENST00000368662 SMIM14Q96QK8 99 aa12.32□□□□□ -0.44
TUBE1-202ENST00000368662 DHRS4Q9BTZ2 278 aa12.32□□□□□ -0.44
TUBE1-202ENST00000368662 POLR3BQ9NW08 1133 aaPredicted RBP12.32□□□□□ -0.44
TUBE1-202ENST00000368662 ZNF180Q9UJW8 692 aa12.32□□□□□ -0.44
TUBE1-202ENST00000368662 KCTD3Q9Y597 815 aa12.32□□□□□ -0.44
TUBE1-202ENST00000368662 A0A1W2PQF6 199 aa12.31□□□□□ -0.44
TUBE1-202ENST00000368662 TLDC2A0PJX2 215 aa12.31□□□□□ -0.44
TUBE1-202ENST00000368662 H0Y858 1186 aa12.31□□□□□ -0.44
TUBE1-202ENST00000368662 ATG13O75143 517 aa12.31□□□□□ -0.44
TUBE1-202ENST00000368662 CLDN7O95471 211 aa12.31□□□□□ -0.44
TUBE1-202ENST00000368662 SLC4A1P02730 911 aa12.31□□□□□ -0.44
TUBE1-202ENST00000368662 DNTTP04053 509 aa12.31□□□□□ -0.44
TUBE1-202ENST00000368662 C7P10643 843 aa12.31□□□□□ -0.44
TUBE1-202ENST00000368662 CHRNB1P11230 501 aa12.31□□□□□ -0.44
TUBE1-202ENST00000368662 ADRB3P13945 408 aa12.31□□□□□ -0.44
TUBE1-202ENST00000368662 ARNTP27540 789 aa12.31□□□□□ -0.44
TUBE1-202ENST00000368662 ATP5DP30049 168 aa12.31□□□□□ -0.44
TUBE1-202ENST00000368662 COPAP53621 1224 aa12.31□□□□□ -0.44
TUBE1-202ENST00000368662 ILF2Q12905 390 aaKnown RBP12.31□□□□□ -0.44
TUBE1-202ENST00000368662 POM121L1PQ3SYA9 428 aa12.31□□□□□ -0.44
TUBE1-202ENST00000368662 TEDDM1Q5T9Z0 273 aa12.31□□□□□ -0.44
TUBE1-202ENST00000368662 LGSNQ5TDP6 509 aa12.31□□□□□ -0.44
TUBE1-202ENST00000368662 NEPROQ6NW34 567 aa12.31□□□□□ -0.44
TUBE1-202ENST00000368662 ADGRD1Q6QNK2 874 aa12.31□□□□□ -0.44
TUBE1-202ENST00000368662 AFTPHQ6ULP2 937 aa12.31□□□□□ -0.44
TUBE1-202ENST00000368662 KIAA0408Q6ZU52 694 aa12.31□□□□□ -0.44
TUBE1-202ENST00000368662 TAOK1Q7L7X3 1001 aa12.31□□□□□ -0.44
TUBE1-202ENST00000368662 MTERF4Q7Z6M4 381 aaKnown RBP12.31□□□□□ -0.44
TUBE1-202ENST00000368662 UNC5BQ8IZJ1 945 aa12.31□□□□□ -0.44
TUBE1-202ENST00000368662 GJD3Q8N144 294 aa12.31□□□□□ -0.44
TUBE1-202ENST00000368662 OR6P1Q8NGX9 317 aa12.31□□□□□ -0.44
TUBE1-202ENST00000368662 SCG3Q8WXD2 468 aaKnown RBP12.31□□□□□ -0.44
TUBE1-202ENST00000368662 ARRDC3Q96B67 414 aa12.31□□□□□ -0.44
TUBE1-202ENST00000368662 TBATAQ96M53 351 aa12.31□□□□□ -0.44
TUBE1-202ENST00000368662 CPNE1Q99829 537 aa12.31□□□□□ -0.44
TUBE1-202ENST00000368662 CDH19Q9H159 772 aa12.31□□□□□ -0.44
TUBE1-202ENST00000368662 LTB4R2Q9NPC1 389 aa12.31□□□□□ -0.44
TUBE1-202ENST00000368662 RAD18Q9NS91 495 aa12.31□□□□□ -0.44
TUBE1-202ENST00000368662 APPL1Q9UKG1 709 aa12.31□□□□□ -0.44
TUBE1-202ENST00000368662 MYLKQ15746 1914 aa12.31□□□□□ -0.44
TUBE1-202ENST00000368662 KRBA1A5PL33 1030 aa12.31□□□□□ -0.44
TUBE1-202ENST00000368662 RGSL1A5PLK6 1076 aa12.31□□□□□ -0.44
TUBE1-202ENST00000368662 CHURC1-FNTBB4DL54 471 aa12.31□□□□□ -0.44
TUBE1-202ENST00000368662 PSMD11O00231 422 aa12.31□□□□□ -0.44
TUBE1-202ENST00000368662 RGS16O15492 202 aaPredicted RBP12.31□□□□□ -0.44
TUBE1-202ENST00000368662 BUD23O43709 281 aaKnown RBP12.31□□□□□ -0.44
TUBE1-202ENST00000368662 CNTFP26441 200 aa12.31□□□□□ -0.44
TUBE1-202ENST00000368662 MMP12P39900 470 aa12.31□□□□□ -0.44
TUBE1-202ENST00000368662 SLCO1A2P46721 670 aa12.31□□□□□ -0.44
TUBE1-202ENST00000368662 SERPINB9P50453 376 aa12.31□□□□□ -0.44
TUBE1-202ENST00000368662 TMPRSS15P98073 1019 aa12.31□□□□□ -0.44
TUBE1-202ENST00000368662 PTSQ03393 145 aa12.31□□□□□ -0.44
TUBE1-202ENST00000368662 EFTUD2Q15029 972 aaKnown RBP eCLIP12.31□□□□□ -0.44
TUBE1-202ENST00000368662 TTC31Q49AM3 519 aaPredicted RBP12.31□□□□□ -0.44
TUBE1-202ENST00000368662 MRNIPQ6NTE8 343 aa12.31□□□□□ -0.44
TUBE1-202ENST00000368662 KIAA1211LQ6NV74 962 aa12.31□□□□□ -0.44
TUBE1-202ENST00000368662 SIX5Q8N196 739 aa12.31□□□□□ -0.44
TUBE1-202ENST00000368662 ZNF687Q8N1G0 1237 aa12.31□□□□□ -0.44
TUBE1-202ENST00000368662 OR4L1Q8NH43 312 aa12.31□□□□□ -0.44
TUBE1-202ENST00000368662 CENPHQ9H3R5 247 aa12.31□□□□□ -0.44
TUBE1-202ENST00000368662 TMBIM4Q9HC24 238 aa12.31□□□□□ -0.44
TUBE1-202ENST00000368662 SMYD2Q9NRG4 433 aa12.31□□□□□ -0.44
TUBE1-202ENST00000368662 IARS2Q9NSE4 1012 aaKnown RBP12.31□□□□□ -0.44
TUBE1-202ENST00000368662 PKD2L2Q9NZM6 624 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms