RNA–Protein interactions for RNA: ENST00000368226.8

PTPRK-207, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTPRK, Length 6,087 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-207ENST00000368226 OFCC1Q8IZS5 231 aa12.91□□□□□ -0.34
PTPRK-207ENST00000368226 DBF4BQ8NFT6 615 aa12.91□□□□□ -0.34
PTPRK-207ENST00000368226 UBE2E3Q969T4 207 aa12.91□□□□□ -0.34
PTPRK-207ENST00000368226 RCN3Q96D15 328 aa12.91□□□□□ -0.34
PTPRK-207ENST00000368226 SNX27Q96L92 541 aa12.91□□□□□ -0.34
PTPRK-207ENST00000368226 OLFM1Q99784 485 aa12.91□□□□□ -0.34
PTPRK-207ENST00000368226 ATG10Q9H0Y0 220 aa12.91□□□□□ -0.34
PTPRK-207ENST00000368226 SLC27A6Q9Y2P4 619 aa12.91□□□□□ -0.34
PTPRK-207ENST00000368226 MRC1P22897 1456 aa12.91□□□□□ -0.34
PTPRK-207ENST00000368226 A0A0G2JLL6 359 aaPredicted RBP12.91□□□□□ -0.34
PTPRK-207ENST00000368226 CLDN11O75508 207 aa12.91□□□□□ -0.34
PTPRK-207ENST00000368226 PPM1JQ5JR12 505 aa12.91□□□□□ -0.34
PTPRK-207ENST00000368226 ATXN7L2Q5T6C5 722 aaPredicted RBP12.91□□□□□ -0.34
PTPRK-207ENST00000368226 LIPMQ5VYY2 423 aa12.91□□□□□ -0.34
PTPRK-207ENST00000368226 SPESP1Q6UW49 350 aa12.91□□□□□ -0.34
PTPRK-207ENST00000368226 PRRT2Q7Z6L0 340 aaPredicted RBP12.91□□□□□ -0.34
PTPRK-207ENST00000368226 TMEM192Q8IY95 271 aa12.91□□□□□ -0.34
PTPRK-207ENST00000368226 DHRSXQ8N5I4 330 aa12.91□□□□□ -0.34
PTPRK-207ENST00000368226 SLC4A11Q8NBS3 891 aa12.91□□□□□ -0.34
PTPRK-207ENST00000368226 VPS4AQ9UN37 437 aa12.91□□□□□ -0.34
PTPRK-207ENST00000368226 TTC24A2A3L6 582 aaPredicted RBP12.9□□□□□ -0.34
PTPRK-207ENST00000368226 SLC28A1O00337 649 aa12.9□□□□□ -0.34
PTPRK-207ENST00000368226 ADAMTS3O15072 1205 aa12.9□□□□□ -0.34
PTPRK-207ENST00000368226 SLC28A2O43868 658 aa12.9□□□□□ -0.34
PTPRK-207ENST00000368226 PRKCGP05129 697 aa12.9□□□□□ -0.34
PTPRK-207ENST00000368226 ANXA6P08133 673 aa12.9□□□□□ -0.34
PTPRK-207ENST00000368226 SPIBQ01892 262 aa12.9□□□□□ -0.34
PTPRK-207ENST00000368226 ZSWIM7Q19AV6 140 aa12.9□□□□□ -0.34
PTPRK-207ENST00000368226 RORBQ92753 470 aa12.9□□□□□ -0.34
PTPRK-207ENST00000368226 MPSTP25325 297 aa12.9□□□□□ -0.34
PTPRK-207ENST00000368226 IFNGR2P38484 337 aa12.9□□□□□ -0.34
PTPRK-207ENST00000368226 TMED10P49755 219 aaKnown RBP12.9□□□□□ -0.34
PTPRK-207ENST00000368226 RAPSNQ13702 412 aa12.9□□□□□ -0.34
PTPRK-207ENST00000368226 ARHGAP36Q6ZRI8 547 aa12.9□□□□□ -0.34
PTPRK-207ENST00000368226 EIF3MQ7L2H7 374 aaKnown RBP12.9□□□□□ -0.34
PTPRK-207ENST00000368226 VANGL1Q8TAA9 524 aaPredicted RBP12.9□□□□□ -0.34
PTPRK-207ENST00000368226 TFAP2BQ92481 460 aa12.9□□□□□ -0.34
PTPRK-207ENST00000368226 HIC2Q96JB3 615 aa12.9□□□□□ -0.34
PTPRK-207ENST00000368226 LMLNQ96KR4 655 aa12.9□□□□□ -0.34
PTPRK-207ENST00000368226 VPS35Q96QK1 796 aa12.9□□□□□ -0.34
PTPRK-207ENST00000368226 OR52E6Q96RD3 313 aa12.9□□□□□ -0.34
PTPRK-207ENST00000368226 POLR1BQ9H9Y6 1135 aa12.9□□□□□ -0.34
PTPRK-207ENST00000368226 OGDHLQ9ULD0 1010 aa12.9□□□□□ -0.34
PTPRK-207ENST00000368226 MT-CYBP00156 380 aaPredicted RBP12.9□□□□□ -0.34
PTPRK-207ENST00000368226 PSME3P61289 254 aa12.9□□□□□ -0.34
PTPRK-207ENST00000368226 LSM3P62310 102 aaKnown RBP12.9□□□□□ -0.34
PTPRK-207ENST00000368226 WASHC2DQ5SRD0 308 aa12.9□□□□□ -0.34
PTPRK-207ENST00000368226 ZNF618Q5T7W0 954 aa12.9□□□□□ -0.34
PTPRK-207ENST00000368226 HECTD2Q5U5R9 776 aa12.9□□□□□ -0.34
PTPRK-207ENST00000368226 ADAMTSL2Q86TH1 951 aa12.9□□□□□ -0.34
PTPRK-207ENST00000368226 EXOC3L1Q86VI1 746 aa12.9□□□□□ -0.34
PTPRK-207ENST00000368226 SCAMP5Q8TAC9 235 aa12.9□□□□□ -0.34
PTPRK-207ENST00000368226 SIKE1Q9BRV8 207 aa12.9□□□□□ -0.34
PTPRK-207ENST00000368226 TRIT1Q9H3H1 467 aaKnown RBP12.9□□□□□ -0.34
PTPRK-207ENST00000368226 GPN3Q9UHW5 284 aaPredicted RBP12.9□□□□□ -0.34
PTPRK-207ENST00000368226 ZNF510Q9Y2H8 683 aa12.9□□□□□ -0.34
PTPRK-207ENST00000368226 TSC22D4Q9Y3Q8 395 aa12.9□□□□□ -0.34
PTPRK-207ENST00000368226 TIMM22Q9Y584 194 aa12.9□□□□□ -0.34
PTPRK-207ENST00000368226 C9JVG2 144 aa12.9□□□□□ -0.34
PTPRK-207ENST00000368226 AZIN1O14977 448 aa12.9□□□□□ -0.34
PTPRK-207ENST00000368226 HOXB8P17481 243 aaPredicted RBP12.9□□□□□ -0.34
PTPRK-207ENST00000368226 PPP2R2DQ66LE6 453 aa12.9□□□□□ -0.34
PTPRK-207ENST00000368226 LHX5Q9H2C1 402 aa12.9□□□□□ -0.34
PTPRK-207ENST00000368226 MRPL39Q9NYK5 338 aaKnown RBP12.9□□□□□ -0.34
PTPRK-207ENST00000368226 STMN3Q9NZ72 180 aa12.9□□□□□ -0.34
PTPRK-207ENST00000368226 MTF2Q9Y483 593 aaPredicted RBP12.9□□□□□ -0.34
PTPRK-207ENST00000368226 ZNF780BQ9Y6R6 833 aa12.9□□□□□ -0.34
PTPRK-207ENST00000368226 DDX3YO15523 660 aaKnown RBP12.89□□□□□ -0.35
PTPRK-207ENST00000368226 SLC25A12O75746 678 aa12.89□□□□□ -0.35
PTPRK-207ENST00000368226 LYPLA2O95372 231 aa12.89□□□□□ -0.35
PTPRK-207ENST00000368226 ZNF460Q14592 562 aa12.89□□□□□ -0.35
PTPRK-207ENST00000368226 FASTKD3Q14CZ7 662 aaKnown RBP12.89□□□□□ -0.35
PTPRK-207ENST00000368226 ATAT1Q5SQI0 421 aa12.89□□□□□ -0.35
PTPRK-207ENST00000368226 SH3PXD2AQ5TCZ1 1133 aa12.89□□□□□ -0.35
PTPRK-207ENST00000368226 TMC5Q6UXY8 1006 aa12.89□□□□□ -0.35
PTPRK-207ENST00000368226 PAGE2Q7Z2X7 111 aa12.89□□□□□ -0.35
PTPRK-207ENST00000368226 ADGRG2Q8IZP9 1017 aa12.89□□□□□ -0.35
PTPRK-207ENST00000368226 MPP4Q96JB8 637 aa12.89□□□□□ -0.35
PTPRK-207ENST00000368226 PPP3R2Q96LZ3 170 aa12.89□□□□□ -0.35
PTPRK-207ENST00000368226 TSSK3Q96PN8 268 aa12.89□□□□□ -0.35
PTPRK-207ENST00000368226 PTPN18Q99952 460 aa12.89□□□□□ -0.35
PTPRK-207ENST00000368226 C9orf16Q9BUW7 83 aa12.89□□□□□ -0.35
PTPRK-207ENST00000368226 NIFKQ9BYG3 293 aaKnown RBP12.89□□□□□ -0.35
PTPRK-207ENST00000368226 WDR55Q9H6Y2 383 aaPredicted RBP12.89□□□□□ -0.35
PTPRK-207ENST00000368226 PRDM16Q9HAZ2 1276 aa12.89□□□□□ -0.35
PTPRK-207ENST00000368226 TMEM216Q9P0N5 145 aa12.89□□□□□ -0.35
PTPRK-207ENST00000368226 FSCN2O14926 492 aa12.89□□□□□ -0.35
PTPRK-207ENST00000368226 AXIN1O15169 862 aa12.89□□□□□ -0.35
PTPRK-207ENST00000368226 F7P08709 466 aaPredicted RBP12.89□□□□□ -0.35
PTPRK-207ENST00000368226 NOMO1Q15155 1222 aa12.89□□□□□ -0.35
PTPRK-207ENST00000368226 TEX44Q53QW1 395 aa12.89□□□□□ -0.35
PTPRK-207ENST00000368226 PDZK1Q5T2W1 519 aa12.89□□□□□ -0.35
PTPRK-207ENST00000368226 MON1BQ7L1V2 547 aa12.89□□□□□ -0.35
PTPRK-207ENST00000368226 KLHL25Q9H0H3 589 aa12.89□□□□□ -0.35
PTPRK-207ENST00000368226 IGLV3-22A0A075B6J6 115 aa12.89□□□□□ -0.35
PTPRK-207ENST00000368226 CDK14O94921 469 aa12.89□□□□□ -0.35
PTPRK-207ENST00000368226 PSMG1O95456 288 aa12.89□□□□□ -0.35
PTPRK-207ENST00000368226 ALOX12P18054 663 aa12.89□□□□□ -0.35
PTPRK-207ENST00000368226 NELFEP18615 380 aaKnown RBP12.89□□□□□ -0.35
PTPRK-207ENST00000368226 MMP8P22894 467 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms