RNA–Protein interactions for RNA: ENST00000367279.8

PTPN7-202, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN7, Length 3,265 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-202ENST00000367279 OR13C4Q8NGS5 318 aa12.35□□□□□ -0.43
PTPN7-202ENST00000367279 DDI1Q8WTU0 396 aa12.35□□□□□ -0.43
PTPN7-202ENST00000367279 B3GALT6Q96L58 329 aa12.35□□□□□ -0.43
PTPN7-202ENST00000367279 RPRD1AQ96P16 312 aaPredicted RBP12.35□□□□□ -0.43
PTPN7-202ENST00000367279 ADAM2Q99965 735 aa12.35□□□□□ -0.43
PTPN7-202ENST00000367279 SEMA3CQ99985 751 aa12.35□□□□□ -0.43
PTPN7-202ENST00000367279 OSER1Q9NX31 292 aa12.35□□□□□ -0.43
PTPN7-202ENST00000367279 PADI3Q9ULW8 664 aa12.35□□□□□ -0.43
PTPN7-202ENST00000367279 TIMM22Q9Y584 194 aa12.35□□□□□ -0.43
PTPN7-202ENST00000367279 AP1G1O43747 822 aa12.35□□□□□ -0.43
PTPN7-202ENST00000367279 GLP2RO95838 553 aa12.35□□□□□ -0.43
PTPN7-202ENST00000367279 ASLP04424 464 aa12.35□□□□□ -0.43
PTPN7-202ENST00000367279 ALDOCP09972 364 aaKnown RBP12.35□□□□□ -0.43
PTPN7-202ENST00000367279 LEPRP48357 1165 aaKnown RBP12.35□□□□□ -0.43
PTPN7-202ENST00000367279 UNC50Q53HI1 259 aa12.35□□□□□ -0.43
PTPN7-202ENST00000367279 ZNF678Q5SXM1 525 aa12.35□□□□□ -0.43
PTPN7-202ENST00000367279 FAM171BQ6P995 826 aa12.35□□□□□ -0.43
PTPN7-202ENST00000367279 KDELC1Q6UW63 502 aa12.35□□□□□ -0.43
PTPN7-202ENST00000367279 KIAA0408Q6ZU52 694 aa12.35□□□□□ -0.43
PTPN7-202ENST00000367279 DCBLD1Q8N8Z6 715 aa12.35□□□□□ -0.43
PTPN7-202ENST00000367279 DNAJB14Q8TBM8 379 aa12.35□□□□□ -0.43
PTPN7-202ENST00000367279 CYGBQ8WWM9 190 aa12.35□□□□□ -0.43
PTPN7-202ENST00000367279 RSPH1Q8WYR4 309 aa12.35□□□□□ -0.43
PTPN7-202ENST00000367279 SLCO4A1Q96BD0 722 aa12.35□□□□□ -0.43
PTPN7-202ENST00000367279 RMND5BQ96G75 393 aaPredicted RBP12.35□□□□□ -0.43
PTPN7-202ENST00000367279 HAUS8Q9BT25 410 aa12.35□□□□□ -0.43
PTPN7-202ENST00000367279 SMOC2Q9H3U7 446 aa12.35□□□□□ -0.43
PTPN7-202ENST00000367279 DMTF1Q9Y222 760 aa12.35□□□□□ -0.43
PTPN7-202ENST00000367279 GIT1Q9Y2X7 761 aa12.35□□□□□ -0.43
PTPN7-202ENST00000367279 RNF11Q9Y3C5 154 aa12.35□□□□□ -0.43
PTPN7-202ENST00000367279 HEMK1Q9Y5R4 338 aaPredicted RBP12.35□□□□□ -0.43
PTPN7-202ENST00000367279 MGEA5O60502 916 aa12.34□□□□□ -0.43
PTPN7-202ENST00000367279 BAIAP3O94812 1187 aa12.34□□□□□ -0.43
PTPN7-202ENST00000367279 HSPA1AP0DMV8 641 aaKnown RBP12.34□□□□□ -0.43
PTPN7-202ENST00000367279 HSPA1BP0DMV9 641 aaKnown RBP12.34□□□□□ -0.43
PTPN7-202ENST00000367279 ATP6V1B2P21281 511 aa12.34□□□□□ -0.43
PTPN7-202ENST00000367279 PCSK6P29122 969 aa12.34□□□□□ -0.43
PTPN7-202ENST00000367279 SH3BGRP55822 239 aaPredicted RBP12.34□□□□□ -0.43
PTPN7-202ENST00000367279 USP46P62068 366 aa12.34□□□□□ -0.43
PTPN7-202ENST00000367279 SH3BP2P78314 561 aa12.34□□□□□ -0.43
PTPN7-202ENST00000367279 ZNF33AQ06730 810 aa12.34□□□□□ -0.43
PTPN7-202ENST00000367279 ISCA2Q86U28 154 aa12.34□□□□□ -0.43
PTPN7-202ENST00000367279 ESAMQ96AP7 390 aa12.34□□□□□ -0.43
PTPN7-202ENST00000367279 SERPINB11Q96P15 392 aa12.34□□□□□ -0.43
PTPN7-202ENST00000367279 ZNF696Q9H7X3 374 aa12.34□□□□□ -0.43
PTPN7-202ENST00000367279 MYRFQ9Y2G1 1151 aa12.34□□□□□ -0.43
PTPN7-202ENST00000367279 MIA3Q5JRA6 1907 aa12.34□□□□□ -0.43
PTPN7-202ENST00000367279 GOT2P00505 430 aaKnown RBP12.34□□□□□ -0.43
PTPN7-202ENST00000367279 FAM163BP0C2L3 166 aa12.34□□□□□ -0.43
PTPN7-202ENST00000367279 HGFP14210 728 aa12.34□□□□□ -0.43
PTPN7-202ENST00000367279 MLLT6P55198 1093 aaPredicted RBP12.34□□□□□ -0.43
PTPN7-202ENST00000367279 PLIN5Q00G26 463 aa12.34□□□□□ -0.43
PTPN7-202ENST00000367279 ZNF235Q14590 738 aa12.34□□□□□ -0.43
PTPN7-202ENST00000367279 RETREG3Q86VR2 466 aa12.34□□□□□ -0.43
PTPN7-202ENST00000367279 CLYBLQ8N0X4 340 aa12.34□□□□□ -0.43
PTPN7-202ENST00000367279 CBR4Q8N4T8 237 aa12.34□□□□□ -0.43
PTPN7-202ENST00000367279 TWIST2Q8WVJ9 160 aa12.34□□□□□ -0.43
PTPN7-202ENST00000367279 ABTB1Q969K4 478 aaPredicted RBP12.34□□□□□ -0.43
PTPN7-202ENST00000367279 NOL6Q9H6R4 1146 aaKnown RBP12.34□□□□□ -0.43
PTPN7-202ENST00000367279 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.34□□□□□ -0.439e-7■□□□□ 9.5
PTPN7-202ENST00000367279 NOD1Q9Y239 953 aa12.34□□□□□ -0.43
PTPN7-202ENST00000367279 SOCS2O14508 198 aa12.33□□□□□ -0.44
PTPN7-202ENST00000367279 GPR182O15218 404 aa12.33□□□□□ -0.44
PTPN7-202ENST00000367279 CLIC3O95833 236 aa12.33□□□□□ -0.44
PTPN7-202ENST00000367279 S1PR4O95977 384 aa12.33□□□□□ -0.44
PTPN7-202ENST00000367279 PIM1P11309 404 aaPredicted RBP12.33□□□□□ -0.44
PTPN7-202ENST00000367279 SLC7A1P30825 629 aa12.33□□□□□ -0.44
PTPN7-202ENST00000367279 FMO4P31512 558 aa12.33□□□□□ -0.44
PTPN7-202ENST00000367279 HMBOX1Q6NT76 420 aa12.33□□□□□ -0.44
PTPN7-202ENST00000367279 CHSY3Q70JA7 882 aa12.33□□□□□ -0.44
PTPN7-202ENST00000367279 LPCAT2Q7L5N7 544 aa12.33□□□□□ -0.44
PTPN7-202ENST00000367279 TMEM126BQ8IUX1 230 aa12.33□□□□□ -0.44
PTPN7-202ENST00000367279 IMP4Q96G21 291 aaKnown RBP12.33□□□□□ -0.44
PTPN7-202ENST00000367279 EXOC2Q96KP1 924 aa12.33□□□□□ -0.44
PTPN7-202ENST00000367279 PPP1R2P1Q96PQ5 205 aa12.33□□□□□ -0.44
PTPN7-202ENST00000367279 SPON2Q9BUD6 331 aa12.33□□□□□ -0.44
PTPN7-202ENST00000367279 OSBPL11Q9BXB4 747 aa12.33□□□□□ -0.44
PTPN7-202ENST00000367279 ZYG11BQ9C0D3 744 aa12.33□□□□□ -0.44
PTPN7-202ENST00000367279 CCDC68Q9H2F9 335 aa12.33□□□□□ -0.44
PTPN7-202ENST00000367279 MRM3Q9HC36 420 aaKnown RBP12.33□□□□□ -0.44
PTPN7-202ENST00000367279 SARS2Q9NP81 518 aaKnown RBP12.33□□□□□ -0.44
PTPN7-202ENST00000367279 GMIPQ9P107 970 aa12.33□□□□□ -0.44
PTPN7-202ENST00000367279 DNAJC15Q9Y5T4 150 aa12.33□□□□□ -0.44
PTPN7-202ENST00000367279 ACTL7AQ9Y615 435 aa12.33□□□□□ -0.44
PTPN7-202ENST00000367279 COMMD10Q9Y6G5 202 aa12.33□□□□□ -0.44
PTPN7-202ENST00000367279 H3BMM5 538 aa12.33□□□□□ -0.44
PTPN7-202ENST00000367279 AZIN1O14977 448 aa12.33□□□□□ -0.44
PTPN7-202ENST00000367279 TRIM24O15164 1050 aa12.33□□□□□ -0.44
PTPN7-202ENST00000367279 INPP4BO15327 924 aa12.33□□□□□ -0.44
PTPN7-202ENST00000367279 CD3EAPO15446 510 aaKnown RBP12.33□□□□□ -0.44
PTPN7-202ENST00000367279 RHOBTB1O94844 696 aa12.33□□□□□ -0.44
PTPN7-202ENST00000367279 MTHFD1P11586 935 aaKnown RBP12.33□□□□□ -0.44
PTPN7-202ENST00000367279 NCK1P16333 377 aa12.33□□□□□ -0.44
PTPN7-202ENST00000367279 TMED1Q13445 227 aa12.33□□□□□ -0.44
PTPN7-202ENST00000367279 POLD3Q15054 466 aaPredicted RBP12.33□□□□□ -0.44
PTPN7-202ENST00000367279 TAF1CQ15572 869 aaPredicted RBP12.33□□□□□ -0.44
PTPN7-202ENST00000367279 MAPRE1Q15691 268 aaKnown RBP12.33□□□□□ -0.44
PTPN7-202ENST00000367279 C10orf120Q5SQS8 335 aa12.33□□□□□ -0.44
PTPN7-202ENST00000367279 FUNDC1Q8IVP5 155 aa12.33□□□□□ -0.44
PTPN7-202ENST00000367279 CFAP52Q8N1V2 620 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms