RNA–Protein interactions for RNA: ENST00000367142.4

NUCKS1-201, Transcript of nuclear casein kinase and cyclin dependent kinase substrate 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUCKS1, Length 6,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1-201ENST00000367142 GRIA3P42263 894 aa15.72■□□□□ 0.11
NUCKS1-201ENST00000367142 CRADDP78560 199 aa15.72■□□□□ 0.11
NUCKS1-201ENST00000367142 MRPS22P82650 360 aaKnown RBP15.72■□□□□ 0.11
NUCKS1-201ENST00000367142 MTMR8Q96EF0 704 aa15.72■□□□□ 0.11
NUCKS1-201ENST00000367142 DDX20Q9UHI6 824 aaKnown RBP15.72■□□□□ 0.11
NUCKS1-201ENST00000367142 CLDN4O14493 209 aa15.72■□□□□ 0.11
NUCKS1-201ENST00000367142 CMPK1P30085 196 aa15.72■□□□□ 0.11
NUCKS1-201ENST00000367142 RFTN2Q52LD8 501 aaPredicted RBP15.72■□□□□ 0.11
NUCKS1-201ENST00000367142 CHST15Q7LFX5 561 aaPredicted RBP15.72■□□□□ 0.11
NUCKS1-201ENST00000367142 TAF8Q7Z7C8 310 aa15.72■□□□□ 0.11
NUCKS1-201ENST00000367142 KCTD4Q8WVF5 259 aa15.72■□□□□ 0.11
NUCKS1-201ENST00000367142 HAVCR1Q96D42 359 aa15.72■□□□□ 0.11
NUCKS1-201ENST00000367142 TAPBPLQ9BX59 468 aa15.72■□□□□ 0.11
NUCKS1-201ENST00000367142 TCRBV5S4A2TA0A5A2 114 aa15.72■□□□□ 0.11
NUCKS1-201ENST00000367142 CCDC182A6NF36 153 aa15.72■□□□□ 0.11
NUCKS1-201ENST00000367142 TMCC2O75069 709 aa15.72■□□□□ 0.11
NUCKS1-201ENST00000367142 TNFRSF21O75509 655 aa15.72■□□□□ 0.11
NUCKS1-201ENST00000367142 SERPINA1P01009 418 aa15.72■□□□□ 0.11
NUCKS1-201ENST00000367142 EIF2B2P49770 351 aaKnown RBP15.72■□□□□ 0.11
NUCKS1-201ENST00000367142 MAXP61244 160 aa15.72■□□□□ 0.11
NUCKS1-201ENST00000367142 RPP38P78345 283 aaKnown RBP15.72■□□□□ 0.11
NUCKS1-201ENST00000367142 CPSF6Q16630 551 aaKnown RBP eCLIP15.72■□□□□ 0.119e-8■■□□□ 11.7
NUCKS1-201ENST00000367142 DNAJB14Q8TBM8 379 aa15.72■□□□□ 0.11
NUCKS1-201ENST00000367142 PPP1R13LQ8WUF5 828 aa15.72■□□□□ 0.11
NUCKS1-201ENST00000367142 KBTBD7Q8WVZ9 684 aa15.72■□□□□ 0.11
NUCKS1-201ENST00000367142 OGDHLQ9ULD0 1010 aa15.72■□□□□ 0.11
NUCKS1-201ENST00000367142 ADSSP30520 456 aa15.71■□□□□ 0.11
NUCKS1-201ENST00000367142 SPESP1Q6UW49 350 aa15.71■□□□□ 0.11
NUCKS1-201ENST00000367142 ARHGAP36Q6ZRI8 547 aa15.71■□□□□ 0.11
NUCKS1-201ENST00000367142 ALLCQ8N6M5 410 aa15.71■□□□□ 0.11
NUCKS1-201ENST00000367142 FUT8Q9BYC5 575 aa15.71■□□□□ 0.11
NUCKS1-201ENST00000367142 PTPRJQ12913 1337 aa15.71■□□□□ 0.11
NUCKS1-201ENST00000367142 CST1P01037 141 aa15.71■□□□□ 0.11
NUCKS1-201ENST00000367142 GTF2BQ00403 316 aa15.71■□□□□ 0.11
NUCKS1-201ENST00000367142 OR14C36Q8NHC7 312 aa15.71■□□□□ 0.11
NUCKS1-201ENST00000367142 SLC47A1Q96FL8 570 aa15.71■□□□□ 0.11
NUCKS1-201ENST00000367142 FRMPD1Q5SYB0 1578 aa15.71■□□□□ 0.11
NUCKS1-201ENST00000367142 GLYATL1P3A0A0U1RQE8 302 aa15.71■□□□□ 0.11
NUCKS1-201ENST00000367142 LIASO43766 372 aa15.71■□□□□ 0.11
NUCKS1-201ENST00000367142 LRATO95237 230 aa15.71■□□□□ 0.11
NUCKS1-201ENST00000367142 EPHX1P07099 455 aa15.71■□□□□ 0.11
NUCKS1-201ENST00000367142 ZNF132P52740 706 aa15.71■□□□□ 0.11
NUCKS1-201ENST00000367142 NAGLUP54802 743 aa15.71■□□□□ 0.11
NUCKS1-201ENST00000367142 CAPSQ13938 189 aa15.71■□□□□ 0.11
NUCKS1-201ENST00000367142 FAM91A1Q658Y4 838 aa15.71■□□□□ 0.11
NUCKS1-201ENST00000367142 RASSF6Q6ZTQ3 369 aa15.71■□□□□ 0.11
NUCKS1-201ENST00000367142 LRRC52Q8N7C0 313 aa15.71■□□□□ 0.11
NUCKS1-201ENST00000367142 AMER2Q8N7J2 671 aa15.71■□□□□ 0.11
NUCKS1-201ENST00000367142 SRFBP1Q8NEF9 429 aaKnown RBP15.71■□□□□ 0.11
NUCKS1-201ENST00000367142 GPR152Q8TDT2 470 aa15.71■□□□□ 0.11
NUCKS1-201ENST00000367142 PTCD2Q8WV60 388 aaKnown RBP15.71■□□□□ 0.11
NUCKS1-201ENST00000367142 OR52E6Q96RD3 313 aa15.71■□□□□ 0.11
NUCKS1-201ENST00000367142 IDO1P14902 403 aa15.71■□□□□ 0.11
NUCKS1-201ENST00000367142 GOT1P17174 413 aa15.71■□□□□ 0.11
NUCKS1-201ENST00000367142 ACLYP53396 1101 aa15.71■□□□□ 0.11
NUCKS1-201ENST00000367142 PSME3P61289 254 aa15.71■□□□□ 0.11
NUCKS1-201ENST00000367142 C1orf186Q6ZWK4 172 aa15.71■□□□□ 0.11
NUCKS1-201ENST00000367142 PIWIL2Q8TC59 973 aaKnown RBP15.71■□□□□ 0.11
NUCKS1-201ENST00000367142 RIT1Q92963 219 aa15.71■□□□□ 0.11
NUCKS1-201ENST00000367142 KCTD5Q9NXV2 234 aa15.71■□□□□ 0.11
NUCKS1-201ENST00000367142 SAMHD1Q9Y3Z3 626 aaKnown RBP15.71■□□□□ 0.11
NUCKS1-201ENST00000367142 UBIAD1Q9Y5Z9 338 aa15.71■□□□□ 0.11
NUCKS1-201ENST00000367142 ATXN2Q99700 1313 aaKnown RBP15.71■□□□□ 0.1
NUCKS1-201ENST00000367142 FAM25EA8MYX2 175 aa15.71■□□□□ 0.1
NUCKS1-201ENST00000367142 NT5C1B-RDH14C9J2C7 533 aa15.71■□□□□ 0.1
NUCKS1-201ENST00000367142 AZIN1O14977 448 aa15.71■□□□□ 0.1
NUCKS1-201ENST00000367142 MATKP42679 507 aa15.71■□□□□ 0.1
NUCKS1-201ENST00000367142 LAPTM5Q13571 262 aa15.71■□□□□ 0.1
NUCKS1-201ENST00000367142 ITGA7Q13683 1181 aa15.71■□□□□ 0.1
NUCKS1-201ENST00000367142 QPRTQ15274 297 aa15.71■□□□□ 0.1
NUCKS1-201ENST00000367142 CPTPQ5TA50 214 aa15.71■□□□□ 0.1
NUCKS1-201ENST00000367142 IQCF2Q8IXL9 164 aa15.71■□□□□ 0.1
NUCKS1-201ENST00000367142 UBR7Q8N806 425 aa15.71■□□□□ 0.1
NUCKS1-201ENST00000367142 OR7A2PQ8NGA2 310 aa15.71■□□□□ 0.1
NUCKS1-201ENST00000367142 ALKBH4Q9NXW9 302 aa15.71■□□□□ 0.1
NUCKS1-201ENST00000367142 PSMD11O00231 422 aa15.7■□□□□ 0.1
NUCKS1-201ENST00000367142 TRIM38O00635 465 aa15.7■□□□□ 0.1
NUCKS1-201ENST00000367142 FAUP35544 74 aaKnown RBP15.7■□□□□ 0.1
NUCKS1-201ENST00000367142 CCT3P49368 545 aaKnown RBP15.7■□□□□ 0.1
NUCKS1-201ENST00000367142 PPIDQ08752 370 aaKnown RBP15.7■□□□□ 0.1
NUCKS1-201ENST00000367142 TUSC3Q13454 348 aa15.7■□□□□ 0.1
NUCKS1-201ENST00000367142 MYBPC3Q14896 1274 aa15.7■□□□□ 0.1
NUCKS1-201ENST00000367142 CCNYL2Q5T2Q4 361 aa15.7■□□□□ 0.1
NUCKS1-201ENST00000367142 POMZP3Q6PJE2 187 aa15.7■□□□□ 0.1
NUCKS1-201ENST00000367142 FEM1CQ96JP0 617 aa15.7■□□□□ 0.1
NUCKS1-201ENST00000367142 SSR3Q9UNL2 185 aa15.7■□□□□ 0.1
NUCKS1-201ENST00000367142 POLR3HQ9Y535 204 aaPredicted RBP15.7■□□□□ 0.1
NUCKS1-201ENST00000367142 DYTNA2CJ06 578 aa15.7■□□□□ 0.1
NUCKS1-201ENST00000367142 COX4I1P13073 169 aa15.7■□□□□ 0.1
NUCKS1-201ENST00000367142 ZNF697Q5TEC3 545 aa15.7■□□□□ 0.1
NUCKS1-201ENST00000367142 ACMSDQ8TDX5 336 aa15.7■□□□□ 0.1
NUCKS1-201ENST00000367142 NDRG2Q9UN36 371 aaKnown RBP15.7■□□□□ 0.1
NUCKS1-201ENST00000367142 PIRTP0C851 137 aa15.7■□□□□ 0.1
NUCKS1-201ENST00000367142 ZSCAN5DPP0CG00 497 aa15.7■□□□□ 0.1
NUCKS1-201ENST00000367142 HOXB6P17509 224 aaKnown RBP15.7■□□□□ 0.1
NUCKS1-201ENST00000367142 CDH3P22223 829 aa15.7■□□□□ 0.1
NUCKS1-201ENST00000367142 SLC26A3P40879 764 aa15.7■□□□□ 0.1
NUCKS1-201ENST00000367142 LARS2Q15031 903 aaKnown RBP15.7■□□□□ 0.1
NUCKS1-201ENST00000367142 PIWIL4Q7Z3Z4 852 aaKnown RBP15.7■□□□□ 0.1
NUCKS1-201ENST00000367142 ACAT2Q9BWD1 397 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms