RNA–Protein interactions for RNA: ENST00000361373.8

LDB3-202, Transcript of LIM domain binding 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LDB3, Length 5,297 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-202ENST00000361373 LRRC4CQ9HCJ2 640 aa13.48□□□□□ -0.25
LDB3-202ENST00000361373 ADAM30Q9UKF2 790 aa13.48□□□□□ -0.25
LDB3-202ENST00000361373 COG5Q9UP83 839 aa13.48□□□□□ -0.25
LDB3-202ENST00000361373 ZFP37Q9Y6Q3 630 aaPredicted RBP13.48□□□□□ -0.25
LDB3-202ENST00000361373 NRP1O14786 923 aa13.48□□□□□ -0.25
LDB3-202ENST00000361373 CLOCKO15516 846 aa13.48□□□□□ -0.25
LDB3-202ENST00000361373 GPD2P43304 727 aa13.48□□□□□ -0.25
LDB3-202ENST00000361373 GJA9P57773 515 aa13.48□□□□□ -0.25
LDB3-202ENST00000361373 FGD3Q5JSP0 725 aa13.48□□□□□ -0.25
LDB3-202ENST00000361373 APTXQ7Z2E3 356 aaKnown RBP13.48□□□□□ -0.25
LDB3-202ENST00000361373 SPACA7Q96KW9 195 aa13.48□□□□□ -0.25
LDB3-202ENST00000361373 AIF1LQ9BQI0 150 aa13.48□□□□□ -0.25
LDB3-202ENST00000361373 TCAF1Q9Y4C2 921 aa13.48□□□□□ -0.25
LDB3-202ENST00000361373 NRXN3Q9Y4C0 1643 aa13.48□□□□□ -0.25
LDB3-202ENST00000361373 OR6A2O95222 327 aa13.48□□□□□ -0.25
LDB3-202ENST00000361373 NUDT14O95848 222 aa13.48□□□□□ -0.25
LDB3-202ENST00000361373 SERPINA6P08185 405 aa13.48□□□□□ -0.25
LDB3-202ENST00000361373 TRIM40Q6P9F5 258 aa13.48□□□□□ -0.25
LDB3-202ENST00000361373 RFWD3Q6PCD5 774 aa13.48□□□□□ -0.25
LDB3-202ENST00000361373 MPP5Q8N3R9 675 aa13.48□□□□□ -0.25
LDB3-202ENST00000361373 ARL14EPQ8N8R7 260 aaPredicted RBP13.48□□□□□ -0.25
LDB3-202ENST00000361373 TMEM79Q9BSE2 394 aa13.48□□□□□ -0.25
LDB3-202ENST00000361373 FANCEQ9HB96 536 aa13.48□□□□□ -0.25
LDB3-202ENST00000361373 IPO13O94829 963 aaKnown RBP13.48□□□□□ -0.25
LDB3-202ENST00000361373 IFNA16P05015 189 aa13.48□□□□□ -0.25
LDB3-202ENST00000361373 DGKGP49619 791 aa13.48□□□□□ -0.25
LDB3-202ENST00000361373 CCDC142Q17RM4 750 aa13.48□□□□□ -0.25
LDB3-202ENST00000361373 ALG11Q2TAA5 492 aa13.48□□□□□ -0.25
LDB3-202ENST00000361373 HECTD2Q5U5R9 776 aa13.48□□□□□ -0.25
LDB3-202ENST00000361373 DHRSXQ8N5I4 330 aa13.48□□□□□ -0.25
LDB3-202ENST00000361373 CPT1BQ92523 772 aa13.48□□□□□ -0.25
LDB3-202ENST00000361373 AP2M1Q96CW1 435 aa13.48□□□□□ -0.25
LDB3-202ENST00000361373 SPAG4Q9NPE6 437 aa13.48□□□□□ -0.25
LDB3-202ENST00000361373 IGSF9Q9P2J2 1179 aa13.48□□□□□ -0.25
LDB3-202ENST00000361373 SQORQ9Y6N5 450 aa13.48□□□□□ -0.25
LDB3-202ENST00000361373 OR10H2O60403 315 aa13.47□□□□□ -0.25
LDB3-202ENST00000361373 CHRNB2P17787 502 aa13.47□□□□□ -0.25
LDB3-202ENST00000361373 LMO2P25791 158 aa13.47□□□□□ -0.25
LDB3-202ENST00000361373 PNLIPRP1P54315 467 aa13.47□□□□□ -0.25
LDB3-202ENST00000361373 DPYSL2Q16555 572 aa13.47□□□□□ -0.25
LDB3-202ENST00000361373 RHBDF2Q6PJF5 856 aa13.47□□□□□ -0.25
LDB3-202ENST00000361373 AGMOQ6ZNB7 445 aa13.47□□□□□ -0.25
LDB3-202ENST00000361373 CEP68Q76N32 757 aa13.47□□□□□ -0.25
LDB3-202ENST00000361373 MTFMTQ96DP5 389 aaKnown RBP13.47□□□□□ -0.25
LDB3-202ENST00000361373 GDAP2Q9NXN4 497 aa13.47□□□□□ -0.25
LDB3-202ENST00000361373 CLIC5Q9NZA1 410 aa13.47□□□□□ -0.25
LDB3-202ENST00000361373 VPS4AQ9UN37 437 aa13.47□□□□□ -0.25
LDB3-202ENST00000361373 RPL26L1Q9UNX3 145 aaKnown RBP13.47□□□□□ -0.25
LDB3-202ENST00000361373 R3HDM2Q9Y2K5 976 aaKnown RBP13.47□□□□□ -0.25
LDB3-202ENST00000361373 ZNF711Q9Y462 761 aa13.47□□□□□ -0.25
LDB3-202ENST00000361373 PRR23D1E9PI22 279 aaPredicted RBP13.47□□□□□ -0.25
LDB3-202ENST00000361373 TK2O00142 265 aa13.47□□□□□ -0.25
LDB3-202ENST00000361373 VNN1O95497 513 aa13.47□□□□□ -0.25
LDB3-202ENST00000361373 CLPTM1O96005 669 aa13.47□□□□□ -0.25
LDB3-202ENST00000361373 PRR23D2P0DMB1 279 aaPredicted RBP13.47□□□□□ -0.25
LDB3-202ENST00000361373 VAV1P15498 845 aa13.47□□□□□ -0.25
LDB3-202ENST00000361373 CRATP43155 626 aa13.47□□□□□ -0.25
LDB3-202ENST00000361373 RPL38P63173 70 aaKnown RBP13.47□□□□□ -0.25
LDB3-202ENST00000361373 INO80DQ53TQ3 878 aaPredicted RBP13.47□□□□□ -0.25
LDB3-202ENST00000361373 TCHHL1Q5QJ38 904 aaPredicted RBP13.47□□□□□ -0.25
LDB3-202ENST00000361373 OTOP3Q7RTS5 596 aa13.47□□□□□ -0.25
LDB3-202ENST00000361373 ANKS1BQ7Z6G8 1248 aa13.47□□□□□ -0.25
LDB3-202ENST00000361373 DNAJC1Q96KC8 554 aaKnown RBP13.47□□□□□ -0.25
LDB3-202ENST00000361373 SLC4A5Q9BY07 1137 aa13.47□□□□□ -0.25
LDB3-202ENST00000361373 TXNRD2Q9NNW7 524 aa13.47□□□□□ -0.25
LDB3-202ENST00000361373 DNAJC11Q9NVH1 559 aa13.47□□□□□ -0.25
LDB3-202ENST00000361373 COLEC10Q9Y6Z7 277 aa13.47□□□□□ -0.25
LDB3-202ENST00000361373 BPGMP07738 259 aa13.47□□□□□ -0.25
LDB3-202ENST00000361373 COX4I1P13073 169 aa13.47□□□□□ -0.25
LDB3-202ENST00000361373 HCAR3P49019 387 aa13.47□□□□□ -0.25
LDB3-202ENST00000361373 PCYT1AP49585 367 aa13.47□□□□□ -0.25
LDB3-202ENST00000361373 CAMK1DQ8IU85 385 aa13.47□□□□□ -0.25
LDB3-202ENST00000361373 CCDC185Q8N715 623 aa13.47□□□□□ -0.25
LDB3-202ENST00000361373 NPLOC4Q8TAT6 608 aa13.47□□□□□ -0.25
LDB3-202ENST00000361373 RHBGQ9H310 441 aa13.47□□□□□ -0.25
LDB3-202ENST00000361373 PTPRHQ9HD43 1115 aa13.47□□□□□ -0.25
LDB3-202ENST00000361373 YJEFN3A6XGL0 299 aa13.47□□□□□ -0.25
LDB3-202ENST00000361373 H3BN98 237 aa13.47□□□□□ -0.25
LDB3-202ENST00000361373 FFAR3O14843 346 aa13.47□□□□□ -0.25
LDB3-202ENST00000361373 GPR42O15529 346 aa13.47□□□□□ -0.25
LDB3-202ENST00000361373 SLC7A4O43246 635 aa13.47□□□□□ -0.25
LDB3-202ENST00000361373 FSTL1Q12841 308 aa13.47□□□□□ -0.25
LDB3-202ENST00000361373 RAB30Q15771 203 aa13.47□□□□□ -0.25
LDB3-202ENST00000361373 CPSF6Q16630 551 aaKnown RBP eCLIP13.47□□□□□ -0.25
LDB3-202ENST00000361373 SPATA19Q7Z5L4 167 aa13.47□□□□□ -0.25
LDB3-202ENST00000361373 ZBTB2Q8N680 514 aa13.47□□□□□ -0.25
LDB3-202ENST00000361373 OR6K2Q8NGY2 324 aa13.47□□□□□ -0.25
LDB3-202ENST00000361373 ITCHQ96J02 903 aa13.47□□□□□ -0.25
LDB3-202ENST00000361373 TMEM109Q9BVC6 243 aa13.47□□□□□ -0.25
LDB3-202ENST00000361373 OSBPL2Q9H1P3 480 aa13.47□□□□□ -0.25
LDB3-202ENST00000361373 BBIP1A8MTZ0 92 aa13.46□□□□□ -0.25
LDB3-202ENST00000361373 CBX6O95503 412 aa13.46□□□□□ -0.25
LDB3-202ENST00000361373 MYBL2P10244 700 aa13.46□□□□□ -0.25
LDB3-202ENST00000361373 RANBP1P43487 201 aa13.46□□□□□ -0.25
LDB3-202ENST00000361373 OTUD3Q5T2D3 398 aaPredicted RBP13.46□□□□□ -0.25
LDB3-202ENST00000361373 SLC30A9Q6PML9 568 aa13.46□□□□□ -0.25
LDB3-202ENST00000361373 TMEM110Q86TL2 294 aa13.46□□□□□ -0.25
LDB3-202ENST00000361373 BRSK1Q8TDC3 778 aa13.46□□□□□ -0.25
LDB3-202ENST00000361373 SIX2Q9NPC8 291 aa13.46□□□□□ -0.25
LDB3-202ENST00000361373 COPG2Q9UBF2 871 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms