RNA–Protein interactions for RNA: ENST00000361367.6

CTR9-201, Transcript of CTR9 homolog, Paf1/RNA polymerase II complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTR9, Length 4,586 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9-201ENST00000361367 ZNF682O95780 498 aa13.88□□□□□ -0.19
CTR9-201ENST00000361367 OTCP00480 354 aa13.88□□□□□ -0.19
CTR9-201ENST00000361367 HNRNPLP14866 589 aaKnown RBP eCLIP13.88□□□□□ -0.19
CTR9-201ENST00000361367 CHRNA4P43681 627 aa13.88□□□□□ -0.19
CTR9-201ENST00000361367 SLC25A11Q02978 314 aaKnown RBP13.88□□□□□ -0.19
CTR9-201ENST00000361367 SLC10A7Q0GE19 358 aa13.88□□□□□ -0.19
CTR9-201ENST00000361367 FAM43BQ6ZT52 329 aaPredicted RBP13.88□□□□□ -0.19
CTR9-201ENST00000361367 HERVK_113Q902F9 699 aa13.88□□□□□ -0.19
CTR9-201ENST00000361367 EIF2B3Q9NR50 452 aaKnown RBP13.88□□□□□ -0.19
CTR9-201ENST00000361367 IMP3Q9NV31 184 aaKnown RBP13.88□□□□□ -0.19
CTR9-201ENST00000361367 KCTD5Q9NXV2 234 aa13.88□□□□□ -0.19
CTR9-201ENST00000361367 SLC27A6Q9Y2P4 619 aa13.88□□□□□ -0.19
CTR9-201ENST00000361367 ISM1B1AKI9 464 aa13.88□□□□□ -0.19
CTR9-201ENST00000361367 BIRC5O15392 142 aa13.88□□□□□ -0.19
CTR9-201ENST00000361367 IFNA14P01570 189 aa13.88□□□□□ -0.19
CTR9-201ENST00000361367 NMBRP28336 390 aa13.88□□□□□ -0.19
CTR9-201ENST00000361367 PPP2R1BP30154 601 aa13.88□□□□□ -0.19
CTR9-201ENST00000361367 GDI1P31150 447 aa13.88□□□□□ -0.19
CTR9-201ENST00000361367 ZNF132P52740 706 aa13.88□□□□□ -0.19
CTR9-201ENST00000361367 SEMA5AQ13591 1074 aa13.88□□□□□ -0.19
CTR9-201ENST00000361367 RCN1Q15293 331 aa13.88□□□□□ -0.19
CTR9-201ENST00000361367 CPSF6Q16630 551 aaKnown RBP eCLIP13.88□□□□□ -0.191e-6■□□□□ 8.4
CTR9-201ENST00000361367 CELF5Q8N6W0 485 aaKnown RBP13.88□□□□□ -0.19
CTR9-201ENST00000361367 CYP2S1Q96SQ9 504 aa13.88□□□□□ -0.19
CTR9-201ENST00000361367 ZIC5Q96T25 663 aa13.88□□□□□ -0.19
CTR9-201ENST00000361367 TRIM4Q9C037 500 aa13.88□□□□□ -0.19
CTR9-201ENST00000361367 SLC12A4Q9UP95 1085 aa13.88□□□□□ -0.19
CTR9-201ENST00000361367 ANKRD36CQ5JPF3 1778 aa13.87□□□□□ -0.19
CTR9-201ENST00000361367 HDAC3O15379 428 aa13.87□□□□□ -0.19
CTR9-201ENST00000361367 CORO7P57737 925 aa13.87□□□□□ -0.19
CTR9-201ENST00000361367 MPP1Q00013 466 aa13.87□□□□□ -0.19
CTR9-201ENST00000361367 ECT2LQ008S8 904 aa13.87□□□□□ -0.19
CTR9-201ENST00000361367 GRSF1Q12849 480 aaKnown RBP eCLIP13.87□□□□□ -0.19
CTR9-201ENST00000361367 PDGFRLQ15198 375 aa13.87□□□□□ -0.19
CTR9-201ENST00000361367 UBE2R2Q712K3 238 aaPredicted RBP13.87□□□□□ -0.19
CTR9-201ENST00000361367 CMTM8Q8IZV2 173 aa13.87□□□□□ -0.19
CTR9-201ENST00000361367 RAP2CQ9Y3L5 183 aa13.87□□□□□ -0.19
CTR9-201ENST00000361367 ATG13O75143 517 aa13.87□□□□□ -0.19
CTR9-201ENST00000361367 ITGBL1O95965 494 aaPredicted RBP13.87□□□□□ -0.19
CTR9-201ENST00000361367 XKR6Q5GH73 641 aa13.87□□□□□ -0.19
CTR9-201ENST00000361367 DCAF12L1Q5VU92 463 aa13.87□□□□□ -0.19
CTR9-201ENST00000361367 PPP4R4Q6NUP7 873 aa13.87□□□□□ -0.19
CTR9-201ENST00000361367 C10orf107Q8IVU9 208 aa13.87□□□□□ -0.19
CTR9-201ENST00000361367 CMTR2Q8IYT2 770 aaKnown RBP13.87□□□□□ -0.19
CTR9-201ENST00000361367 OR10T2Q8NGX3 314 aa13.87□□□□□ -0.19
CTR9-201ENST00000361367 HHIPL1Q96JK4 782 aa13.87□□□□□ -0.19
CTR9-201ENST00000361367 ZNF599Q96NL3 588 aa13.87□□□□□ -0.19
CTR9-201ENST00000361367 CD84Q9UIB8 345 aa13.87□□□□□ -0.19
CTR9-201ENST00000361367 RAB23Q9ULC3 237 aa13.87□□□□□ -0.19
CTR9-201ENST00000361367 H3BM21 787 aa13.87□□□□□ -0.19
CTR9-201ENST00000361367 SNX3O60493 162 aa13.87□□□□□ -0.19
CTR9-201ENST00000361367 GUCY1B2O75343 617 aa13.87□□□□□ -0.19
CTR9-201ENST00000361367 BMP10O95393 424 aa13.87□□□□□ -0.19
CTR9-201ENST00000361367 TEAD2Q15562 447 aa13.87□□□□□ -0.19
CTR9-201ENST00000361367 MBLAC2Q68D91 279 aa13.87□□□□□ -0.19
CTR9-201ENST00000361367 STARD8Q92502 1023 aa13.87□□□□□ -0.19
CTR9-201ENST00000361367 GPR21Q99679 349 aa13.87□□□□□ -0.19
CTR9-201ENST00000361367 MECRQ9BV79 373 aa13.87□□□□□ -0.19
CTR9-201ENST00000361367 ACAT2Q9BWD1 397 aa13.87□□□□□ -0.19
CTR9-201ENST00000361367 SLCO1B3Q9NPD5 702 aa13.87□□□□□ -0.19
CTR9-201ENST00000361367 SOHLH2Q9NX45 425 aa13.87□□□□□ -0.19
CTR9-201ENST00000361367 GRHL1Q9NZI5 618 aa13.87□□□□□ -0.19
CTR9-201ENST00000361367 SLC17A7Q9P2U7 560 aa13.87□□□□□ -0.19
CTR9-201ENST00000361367 FKBPLQ9UIM3 349 aa13.87□□□□□ -0.19
CTR9-201ENST00000361367 SNX13Q9Y5W8 968 aa13.87□□□□□ -0.19
CTR9-201ENST00000361367 WNT6Q9Y6F9 365 aa13.87□□□□□ -0.19
CTR9-201ENST00000361367 MYH7P12883 1935 aa13.87□□□□□ -0.19
CTR9-201ENST00000361367 TMEM63AO94886 807 aa13.86□□□□□ -0.19
CTR9-201ENST00000361367 WDR47O94967 919 aa13.86□□□□□ -0.19
CTR9-201ENST00000361367 EIF2S1P05198 315 aaKnown RBP13.86□□□□□ -0.19
CTR9-201ENST00000361367 NRLP54845 237 aa13.86□□□□□ -0.19
CTR9-201ENST00000361367 POLE2P56282 527 aa13.86□□□□□ -0.19
CTR9-201ENST00000361367 C2orf27AQ580R0 203 aa13.86□□□□□ -0.19
CTR9-201ENST00000361367 SCIMPQ6UWF3 145 aa13.86□□□□□ -0.19
CTR9-201ENST00000361367 PHYKPLQ8IUZ5 450 aa13.86□□□□□ -0.19
CTR9-201ENST00000361367 BPIFB1Q8TDL5 484 aa13.86□□□□□ -0.19
CTR9-201ENST00000361367 FERD3LQ96RJ6 166 aa13.86□□□□□ -0.19
CTR9-201ENST00000361367 KCTD14Q9BQ13 255 aaPredicted RBP13.86□□□□□ -0.19
CTR9-201ENST00000361367 CAAP1Q9H8G2 361 aa13.86□□□□□ -0.19
CTR9-201ENST00000361367 FNIP2Q9P278 1114 aa13.86□□□□□ -0.19
CTR9-201ENST00000361367 CBX6O95503 412 aa13.86□□□□□ -0.19
CTR9-201ENST00000361367 ZNF23P17027 643 aa13.86□□□□□ -0.19
CTR9-201ENST00000361367 HPCAL1P37235 193 aa13.86□□□□□ -0.19
CTR9-201ENST00000361367 LIMK2P53671 638 aa13.86□□□□□ -0.19
CTR9-201ENST00000361367 PLOD1Q02809 727 aaPredicted RBP13.86□□□□□ -0.19
CTR9-201ENST00000361367 ZNF655Q8N720 491 aaPredicted RBP13.86□□□□□ -0.19
CTR9-201ENST00000361367 TRMT61BQ9BVS5 477 aaKnown RBP13.86□□□□□ -0.19
CTR9-201ENST00000361367 R3HDMLQ9H3Y0 253 aa13.86□□□□□ -0.19
CTR9-201ENST00000361367 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.86□□□□□ -0.19
CTR9-201ENST00000361367 AKAP7Q9P0M2 348 aaPredicted RBP13.86□□□□□ -0.19
CTR9-201ENST00000361367 SGTAO43765 313 aa13.86□□□□□ -0.19
CTR9-201ENST00000361367 SNAP91O60641 907 aa13.86□□□□□ -0.19
CTR9-201ENST00000361367 HLA-DQB2P05538 268 aa13.86□□□□□ -0.19
CTR9-201ENST00000361367 COL6A2P12110 1019 aa13.86□□□□□ -0.19
CTR9-201ENST00000361367 ACVRL1P37023 503 aa13.86□□□□□ -0.19
CTR9-201ENST00000361367 HNF4AP41235 474 aa13.86□□□□□ -0.19
CTR9-201ENST00000361367 WNT7BP56706 349 aa13.86□□□□□ -0.19
CTR9-201ENST00000361367 PDE1CQ14123 709 aaPredicted RBP13.86□□□□□ -0.19
CTR9-201ENST00000361367 CYP20A1Q6UW02 462 aa13.86□□□□□ -0.19
CTR9-201ENST00000361367 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms