RNA–Protein interactions for RNA: ENST00000361309.5

CD47-202, Transcript of CD47 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD47, Length 1,285 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-202ENST00000361309 NRROSQ86YC3 692 aa21.14■□□□□ 0.97
CD47-202ENST00000361309 ARHGAP12Q8IWW6 846 aa21.14■□□□□ 0.97
CD47-202ENST00000361309 RCBTB1Q8NDN9 531 aa21.14■□□□□ 0.97
CD47-202ENST00000361309 NEK11Q8NG66 645 aa21.14■□□□□ 0.97
CD47-202ENST00000361309 ZDHHC1Q8WTX9 485 aa21.14■□□□□ 0.97
CD47-202ENST00000361309 NUDT22Q9BRQ3 303 aa21.14■□□□□ 0.97
CD47-202ENST00000361309 B3GNT4Q9C0J1 378 aa21.14■□□□□ 0.97
CD47-202ENST00000361309 IQCJ-SCHIP1C9J366 451 aaPredicted RBP21.13■□□□□ 0.97
CD47-202ENST00000361309 DFFAO00273 331 aa21.13■□□□□ 0.97
CD47-202ENST00000361309 DAPK3O43293 454 aa21.13■□□□□ 0.97
CD47-202ENST00000361309 FGF1P05230 155 aa21.13■□□□□ 0.97
CD47-202ENST00000361309 MYCLP1P12525 358 aaPredicted RBP21.13■□□□□ 0.97
CD47-202ENST00000361309 DESP17661 470 aa21.13■□□□□ 0.97
CD47-202ENST00000361309 ZNF438Q7Z4V0 828 aa21.13■□□□□ 0.97
CD47-202ENST00000361309 MCOLN2Q8IZK6 566 aa21.13■□□□□ 0.97
CD47-202ENST00000361309 NUS1Q96E22 293 aa21.13■□□□□ 0.97
CD47-202ENST00000361309 COQ10AQ96MF6 247 aa21.13■□□□□ 0.97
CD47-202ENST00000361309 KCTD15Q96SI1 283 aaPredicted RBP21.13■□□□□ 0.97
CD47-202ENST00000361309 B4GALT6Q9UBX8 382 aa21.13■□□□□ 0.97
CD47-202ENST00000361309 TTC24A2A3L6 582 aaPredicted RBP21.12■□□□□ 0.97
CD47-202ENST00000361309 STMND1H3BQB6 276 aa21.12■□□□□ 0.97
CD47-202ENST00000361309 FUCA1P04066 466 aa21.12■□□□□ 0.97
CD47-202ENST00000361309 CEACAM5P06731 702 aa21.12■□□□□ 0.97
CD47-202ENST00000361309 ERCC2P18074 760 aa21.12■□□□□ 0.97
CD47-202ENST00000361309 AK4P27144 223 aaPredicted RBP21.12■□□□□ 0.97
CD47-202ENST00000361309 COPB1P53618 953 aaKnown RBP21.12■□□□□ 0.97
CD47-202ENST00000361309 IL10RBQ08334 325 aa21.12■□□□□ 0.97
CD47-202ENST00000361309 RFTN1Q14699 578 aaPredicted RBP21.12■□□□□ 0.97
CD47-202ENST00000361309 NR1D2Q14995 579 aa21.12■□□□□ 0.97
CD47-202ENST00000361309 CLCA4Q14CN2 919 aa21.12■□□□□ 0.97
CD47-202ENST00000361309 ERMARDQ5T6L9 678 aa21.12■□□□□ 0.97
CD47-202ENST00000361309 ACAD10Q6JQN1 1059 aa21.12■□□□□ 0.97
CD47-202ENST00000361309 RFX8Q6ZV50 586 aa21.12■□□□□ 0.97
CD47-202ENST00000361309 HEATR4Q86WZ0 1026 aa21.12■□□□□ 0.97
CD47-202ENST00000361309 NPWQ8N729 165 aa21.12■□□□□ 0.97
CD47-202ENST00000361309 PEBP4Q96S96 227 aa21.12■□□□□ 0.97
CD47-202ENST00000361309 FUCA2Q9BTY2 467 aa21.12■□□□□ 0.97
CD47-202ENST00000361309 SNRNP25Q9BV90 132 aaKnown RBP21.12■□□□□ 0.97
CD47-202ENST00000361309 GSDMCQ9BYG8 508 aa21.12■□□□□ 0.97
CD47-202ENST00000361309 PHPT1Q9NRX4 125 aaPredicted RBP21.12■□□□□ 0.97
CD47-202ENST00000361309 FANCLQ9NW38 375 aa21.12■□□□□ 0.97
CD47-202ENST00000361309 TAAR2Q9P1P5 351 aa21.12■□□□□ 0.97
CD47-202ENST00000361309 PCSK1NQ9UHG2 260 aa21.12■□□□□ 0.97
CD47-202ENST00000361309 IGHV5-10-1A0A0J9YXX1 117 aa21.11■□□□□ 0.97
CD47-202ENST00000361309 HGSO14964 777 aaPredicted RBP21.11■□□□□ 0.97
CD47-202ENST00000361309 PPFIA2O75334 1257 aa21.11■□□□□ 0.97
CD47-202ENST00000361309 ECEL1O95672 775 aa21.11■□□□□ 0.97
CD47-202ENST00000361309 PSMA2P25787 234 aa21.11■□□□□ 0.97
CD47-202ENST00000361309 CD1CP29017 333 aa21.11■□□□□ 0.97
CD47-202ENST00000361309 GNPDA1P46926 289 aa21.11■□□□□ 0.97
CD47-202ENST00000361309 AP1S1P61966 158 aa21.11■□□□□ 0.97
CD47-202ENST00000361309 ILF3Q12906 894 aaKnown RBP eCLIP21.11■□□□□ 0.97
CD47-202ENST00000361309 DENND2CQ68D51 928 aa21.11■□□□□ 0.97
CD47-202ENST00000361309 PATE1Q8WXA2 126 aa21.11■□□□□ 0.97
CD47-202ENST00000361309 PMEPA1Q969W9 287 aa21.11■□□□□ 0.97
CD47-202ENST00000361309 CCDC74BQ96LY2 380 aa21.11■□□□□ 0.97
CD47-202ENST00000361309 TAAR9Q96RI9 348 aa21.11■□□□□ 0.97
CD47-202ENST00000361309 TEX101Q9BY14 249 aa21.11■□□□□ 0.97
CD47-202ENST00000361309 GEMIN8Q9NWZ8 242 aaKnown RBP21.11■□□□□ 0.97
CD47-202ENST00000361309 SUFUQ9UMX1 484 aa21.11■□□□□ 0.97
CD47-202ENST00000361309 GTF3C3Q9Y5Q9 886 aa21.11■□□□□ 0.97
CD47-202ENST00000361309 EIF3CLB5ME19 914 aaKnown RBP21.1■□□□□ 0.97
CD47-202ENST00000361309 ZW10O43264 779 aa21.1■□□□□ 0.97
CD47-202ENST00000361309 FGF3P11487 239 aaPredicted RBP21.1■□□□□ 0.97
CD47-202ENST00000361309 RENBPP51606 427 aa21.1■□□□□ 0.97
CD47-202ENST00000361309 ARSDP51689 593 aa21.1■□□□□ 0.97
CD47-202ENST00000361309 CNGA3Q16281 694 aa21.1■□□□□ 0.97
CD47-202ENST00000361309 CLPPQ16740 277 aaPredicted RBP21.1■□□□□ 0.97
CD47-202ENST00000361309 SLC30A9Q6PML9 568 aa21.1■□□□□ 0.97
CD47-202ENST00000361309 TP53INP2Q8IXH6 220 aa21.1■□□□□ 0.97
CD47-202ENST00000361309 ARFGAP1Q8N6T3 406 aa21.1■□□□□ 0.97
CD47-202ENST00000361309 PTCD2Q8WV60 388 aaKnown RBP21.1■□□□□ 0.97
CD47-202ENST00000361309 PSKH2Q96QS6 385 aa21.1■□□□□ 0.97
CD47-202ENST00000361309 EIF3CQ99613 913 aaKnown RBP21.1■□□□□ 0.97
CD47-202ENST00000361309 SLC12A9Q9BXP2 914 aa21.1■□□□□ 0.97
CD47-202ENST00000361309 FRMD8Q9BZ67 464 aaPredicted RBP21.1■□□□□ 0.97
CD47-202ENST00000361309 SLC25A18Q9H1K4 315 aa21.1■□□□□ 0.97
CD47-202ENST00000361309 TRNAU1APQ9NX07 287 aaKnown RBP21.1■□□□□ 0.97
CD47-202ENST00000361309 TAS2R14Q9NYV8 317 aa21.1■□□□□ 0.97
CD47-202ENST00000361309 SEPT3Q9UH03 358 aa21.1■□□□□ 0.97
CD47-202ENST00000361309 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP21.09■□□□□ 0.97
CD47-202ENST00000361309 VIPR1P32241 457 aa21.09■□□□□ 0.97
CD47-202ENST00000361309 GPR3P46089 330 aa21.09■□□□□ 0.97
CD47-202ENST00000361309 ATP1A2P50993 1020 aa21.09■□□□□ 0.97
CD47-202ENST00000361309 LIMK2P53671 638 aa21.09■□□□□ 0.97
CD47-202ENST00000361309 CDK3Q00526 305 aa21.09■□□□□ 0.97
CD47-202ENST00000361309 SLC10A7Q0GE19 358 aa21.09■□□□□ 0.97
CD47-202ENST00000361309 BIRC2Q13490 618 aa21.09■□□□□ 0.97
CD47-202ENST00000361309 MAMLD1Q13495 774 aa21.09■□□□□ 0.97
CD47-202ENST00000361309 LBRQ14739 615 aaKnown RBP21.09■□□□□ 0.97
CD47-202ENST00000361309 PPP6R3Q5H9R7 873 aaPredicted RBP21.09■□□□□ 0.97
CD47-202ENST00000361309 NKAIN2Q5VXU1 208 aa21.09■□□□□ 0.97
CD47-202ENST00000361309 PDCD6IPQ8WUM4 868 aaKnown RBP21.09■□□□□ 0.97
CD47-202ENST00000361309 NKD1Q969G9 470 aa21.09■□□□□ 0.97
CD47-202ENST00000361309 PCDHGC4Q9Y5F7 938 aa21.09■□□□□ 0.97
CD47-202ENST00000361309 ST14Q9Y5Y6 855 aa21.09■□□□□ 0.97
CD47-202ENST00000361309 NBASA2RRP1 2371 aa21.08■□□□□ 0.97
CD47-202ENST00000361309 GOLGA6CA6NDK9 693 aa21.08■□□□□ 0.97
CD47-202ENST00000361309 GOLGA6BA6NDN3 693 aa21.08■□□□□ 0.97
CD47-202ENST00000361309 LGALS16A8MUM7 142 aa21.08■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms