RNA–Protein interactions for RNA: ENST00000361198.9

LDB1-201, Transcript of LIM domain binding 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDB1, Length 2,285 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-201ENST00000361198 SLC22A2O15244 555 aa22.65■■□□□ 1.22
LDB1-201ENST00000361198 RNASEH1O60930 286 aaKnown RBP22.65■■□□□ 1.22
LDB1-201ENST00000361198 LTA4HP09960 611 aaKnown RBP22.65■■□□□ 1.22
LDB1-201ENST00000361198 TAF12Q16514 161 aa22.65■■□□□ 1.22
LDB1-201ENST00000361198 TCHHL1Q5QJ38 904 aaPredicted RBP22.65■■□□□ 1.22
LDB1-201ENST00000361198 AGAP9Q5VTM2 703 aa22.65■■□□□ 1.22
LDB1-201ENST00000361198 SLC30A9Q6PML9 568 aa22.65■■□□□ 1.22
LDB1-201ENST00000361198 TMEM207Q6UWW9 146 aa22.65■■□□□ 1.22
LDB1-201ENST00000361198 SPDYE1Q8NFV5 336 aaPredicted RBP22.65■■□□□ 1.22
LDB1-201ENST00000361198 TSPAN17Q96FV3 270 aa22.65■■□□□ 1.22
LDB1-201ENST00000361198 DDX50Q9BQ39 737 aaKnown RBP22.65■■□□□ 1.22
LDB1-201ENST00000361198 NUF2Q9BZD4 464 aa22.65■■□□□ 1.22
LDB1-201ENST00000361198 POMKQ9H5K3 350 aa22.65■■□□□ 1.22
LDB1-201ENST00000361198 PIDD1Q9HB75 910 aa22.65■■□□□ 1.22
LDB1-201ENST00000361198 PAPOLBQ9NRJ5 636 aaKnown RBP22.65■■□□□ 1.22
LDB1-201ENST00000361198 ANAPC1Q9H1A4 1944 aa22.64■■□□□ 1.22
LDB1-201ENST00000361198 RGSL1A5PLK6 1076 aa22.64■■□□□ 1.22
LDB1-201ENST00000361198 NDST3O95803 873 aa22.64■■□□□ 1.22
LDB1-201ENST00000361198 RHOCP08134 193 aa22.64■■□□□ 1.22
LDB1-201ENST00000361198 KCNA5P22460 613 aa22.64■■□□□ 1.22
LDB1-201ENST00000361198 ATP5F1P24539 256 aaPredicted RBP22.64■■□□□ 1.22
LDB1-201ENST00000361198 EPHA3P29320 983 aa22.64■■□□□ 1.22
LDB1-201ENST00000361198 ADSLP30566 484 aaPredicted RBP22.64■■□□□ 1.22
LDB1-201ENST00000361198 ALDH1A3P47895 512 aa22.64■■□□□ 1.22
LDB1-201ENST00000361198 SCNN1BP51168 640 aa22.64■■□□□ 1.22
LDB1-201ENST00000361198 ADGRF1Q5T601 910 aa22.64■■□□□ 1.22
LDB1-201ENST00000361198 C16orf59Q7L2K0 433 aa22.64■■□□□ 1.22
LDB1-201ENST00000361198 CPSF7Q8N684 471 aaKnown RBP22.64■■□□□ 1.22
LDB1-201ENST00000361198 PDCD6IPQ8WUM4 868 aaKnown RBP22.64■■□□□ 1.22
LDB1-201ENST00000361198 PEX13Q92968 403 aa22.64■■□□□ 1.22
LDB1-201ENST00000361198 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP22.64■■□□□ 1.21
LDB1-201ENST00000361198 ILVBLA1L0T0 632 aa22.64■■□□□ 1.21
LDB1-201ENST00000361198 CCDC162PA2VCL2 907 aa22.64■■□□□ 1.21
LDB1-201ENST00000361198 PEX1O43933 1283 aa22.64■■□□□ 1.21
LDB1-201ENST00000361198 GLP2RO95838 553 aa22.64■■□□□ 1.21
LDB1-201ENST00000361198 JUNP05412 331 aaKnown RBP22.64■■□□□ 1.21
LDB1-201ENST00000361198 CCL5P13501 91 aa22.64■■□□□ 1.21
LDB1-201ENST00000361198 PIK3R1P27986 724 aa22.64■■□□□ 1.21
LDB1-201ENST00000361198 RPL26P61254 145 aaKnown RBP22.64■■□□□ 1.21
LDB1-201ENST00000361198 ZNF177Q13360 481 aaPredicted RBP22.64■■□□□ 1.21
LDB1-201ENST00000361198 THEMIS2Q5TEJ8 643 aa22.64■■□□□ 1.21
LDB1-201ENST00000361198 LPCAT4Q643R3 524 aa22.64■■□□□ 1.21
LDB1-201ENST00000361198 TRIM67Q6ZTA4 783 aa22.64■■□□□ 1.21
LDB1-201ENST00000361198 GDPD5Q8WTR4 605 aa22.64■■□□□ 1.21
LDB1-201ENST00000361198 ZNF385DQ9H6B1 395 aa22.64■■□□□ 1.21
LDB1-201ENST00000361198 NCKIPSDQ9NZQ3 722 aa22.64■■□□□ 1.21
LDB1-201ENST00000361198 STK39Q9UEW8 545 aa22.64■■□□□ 1.21
LDB1-201ENST00000361198 CD3EAPO15446 510 aaKnown RBP22.63■■□□□ 1.21
LDB1-201ENST00000361198 ZCCHC18P0CG32 403 aa22.63■■□□□ 1.21
LDB1-201ENST00000361198 UQCRBP14927 111 aa22.63■■□□□ 1.21
LDB1-201ENST00000361198 RAG1P15918 1043 aa22.63■■□□□ 1.21
LDB1-201ENST00000361198 SEMA3AQ14563 771 aa22.63■■□□□ 1.21
LDB1-201ENST00000361198 LSM12Q3MHD2 195 aaKnown RBP22.63■■□□□ 1.21
LDB1-201ENST00000361198 TPGS2Q68CL5 300 aa22.63■■□□□ 1.21
LDB1-201ENST00000361198 FAM117BQ6P1L5 589 aa22.63■■□□□ 1.21
LDB1-201ENST00000361198 PIM3Q86V86 326 aa22.63■■□□□ 1.21
LDB1-201ENST00000361198 GALNT15Q8N3T1 639 aa22.63■■□□□ 1.21
LDB1-201ENST00000361198 RP9Q8TA86 221 aaKnown RBP22.63■■□□□ 1.21
LDB1-201ENST00000361198 KLF16Q9BXK1 252 aaPredicted RBP22.63■■□□□ 1.21
LDB1-201ENST00000361198 HSFX1Q9UBD0 423 aa22.63■■□□□ 1.21
LDB1-201ENST00000361198 A0A1B0GVM2 712 aa22.62■■□□□ 1.21
LDB1-201ENST00000361198 TCAF2A6NFQ2 919 aa22.62■■□□□ 1.21
LDB1-201ENST00000361198 SLCO1B7G3V0H7 640 aa22.62■■□□□ 1.21
LDB1-201ENST00000361198 CBX4O00257 560 aa22.62■■□□□ 1.21
LDB1-201ENST00000361198 NPHS1O60500 1241 aa22.62■■□□□ 1.21
LDB1-201ENST00000361198 RPP40O75818 363 aaKnown RBP22.62■■□□□ 1.21
LDB1-201ENST00000361198 WISP3O95389 354 aaPredicted RBP22.62■■□□□ 1.21
LDB1-201ENST00000361198 CR2P20023 1033 aa22.62■■□□□ 1.21
LDB1-201ENST00000361198 PEX2P28328 305 aa22.62■■□□□ 1.21
LDB1-201ENST00000361198 MNX1P50219 401 aaPredicted RBP22.62■■□□□ 1.21
LDB1-201ENST00000361198 DNAJB13P59910 316 aa22.62■■□□□ 1.21
LDB1-201ENST00000361198 PFKPQ01813 784 aa22.62■■□□□ 1.21
LDB1-201ENST00000361198 EFCAB3Q8N7B9 438 aa22.62■■□□□ 1.21
LDB1-201ENST00000361198 CYP4F12Q9HCS2 524 aa22.62■■□□□ 1.21
LDB1-201ENST00000361198 SMPD4Q9NXE4 827 aa22.62■■□□□ 1.21
LDB1-201ENST00000361198 VTI1BQ9UEU0 232 aa22.62■■□□□ 1.21
LDB1-201ENST00000361198 VPS28Q9UK41 221 aa22.62■■□□□ 1.21
LDB1-201ENST00000361198 INSIG1O15503 277 aa22.62■■□□□ 1.21
LDB1-201ENST00000361198 SERPINB5P36952 375 aa22.62■■□□□ 1.21
LDB1-201ENST00000361198 LAMB3Q13751 1172 aa22.62■■□□□ 1.21
LDB1-201ENST00000361198 LRRC36Q1X8D7 754 aa22.62■■□□□ 1.21
LDB1-201ENST00000361198 GPR158Q5T848 1215 aa22.62■■□□□ 1.21
LDB1-201ENST00000361198 KLC3Q6P597 504 aa22.62■■□□□ 1.21
LDB1-201ENST00000361198 ZNF549Q6P9A3 640 aa22.62■■□□□ 1.21
LDB1-201ENST00000361198 CNKSR3Q6P9H4 555 aa22.62■■□□□ 1.21
LDB1-201ENST00000361198 PIWIL4Q7Z3Z4 852 aaKnown RBP22.62■■□□□ 1.21
LDB1-201ENST00000361198 SETD3Q86TU7 594 aaPredicted RBP22.62■■□□□ 1.21
LDB1-201ENST00000361198 KDM1BQ8NB78 822 aa22.62■■□□□ 1.21
LDB1-201ENST00000361198 TRMT2BQ96GJ1 504 aaKnown RBP22.62■■□□□ 1.21
LDB1-201ENST00000361198 TMEM169Q96HH4 297 aa22.62■■□□□ 1.21
LDB1-201ENST00000361198 TBC1D30Q9Y2I9 924 aa22.62■■□□□ 1.21
LDB1-201ENST00000361198 SPO11Q9Y5K1 396 aa22.62■■□□□ 1.21
LDB1-201ENST00000361198 A8MT66 165 aa22.61■■□□□ 1.21
LDB1-201ENST00000361198 TMEM233B4DJY2 109 aa22.61■■□□□ 1.21
LDB1-201ENST00000361198 SCAMP3O14828 347 aaKnown RBP22.61■■□□□ 1.21
LDB1-201ENST00000361198 CD1EP15812 388 aa22.61■■□□□ 1.21
LDB1-201ENST00000361198 MED21Q13503 144 aa22.61■■□□□ 1.21
LDB1-201ENST00000361198 ACAP2Q15057 778 aa22.61■■□□□ 1.21
LDB1-201ENST00000361198 CYTH1Q15438 398 aa22.61■■□□□ 1.21
LDB1-201ENST00000361198 CHST9Q7L1S5 443 aa22.61■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms