RNA–Protein interactions for RNA: ENST00000359895.6

PDLIM7-203, Transcript of PDZ and LIM domain 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDLIM7, Length 1,567 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-203ENST00000359895 TRMOQ9BU70 441 aa18.3■□□□□ 0.52
PDLIM7-203ENST00000359895 ZBP1Q9H171 429 aa18.3■□□□□ 0.52
PDLIM7-203ENST00000359895 LHX3Q9UBR4 397 aa18.3■□□□□ 0.52
PDLIM7-203ENST00000359895 VPS28Q9UK41 221 aa18.3■□□□□ 0.52
PDLIM7-203ENST00000359895 CPQQ9Y646 472 aa18.3■□□□□ 0.52
PDLIM7-203ENST00000359895 ANKRD66B4E2M5 251 aa18.3■□□□□ 0.52
PDLIM7-203ENST00000359895 E9PBE3 544 aa18.3■□□□□ 0.52
PDLIM7-203ENST00000359895 GREM1O60565 184 aa18.3■□□□□ 0.52
PDLIM7-203ENST00000359895 KLHL41O60662 606 aa18.3■□□□□ 0.52
PDLIM7-203ENST00000359895 SMIM24O75264 130 aa18.3■□□□□ 0.52
PDLIM7-203ENST00000359895 ANP32DO95626 131 aa18.3■□□□□ 0.52
PDLIM7-203ENST00000359895 CD160O95971 181 aa18.3■□□□□ 0.52
PDLIM7-203ENST00000359895 CTSAP10619 480 aa18.3■□□□□ 0.52
PDLIM7-203ENST00000359895 GM2AP17900 193 aa18.3■□□□□ 0.52
PDLIM7-203ENST00000359895 RGS19P49795 217 aa18.3■□□□□ 0.52
PDLIM7-203ENST00000359895 CDH18Q13634 790 aa18.3■□□□□ 0.52
PDLIM7-203ENST00000359895 SEMA3AQ14563 771 aa18.3■□□□□ 0.52
PDLIM7-203ENST00000359895 GPR158Q5T848 1215 aa18.3■□□□□ 0.52
PDLIM7-203ENST00000359895 CCDC149Q6ZUS6 474 aa18.3■□□□□ 0.52
PDLIM7-203ENST00000359895 DCAF4L2Q8NA75 395 aa18.3■□□□□ 0.52
PDLIM7-203ENST00000359895 KDM1BQ8NB78 822 aa18.3■□□□□ 0.52
PDLIM7-203ENST00000359895 MDGA1Q8NFP4 955 aa18.3■□□□□ 0.52
PDLIM7-203ENST00000359895 FAM161BQ96MY7 647 aa18.3■□□□□ 0.52
PDLIM7-203ENST00000359895 ANKRD27Q96NW4 1050 aa18.3■□□□□ 0.52
PDLIM7-203ENST00000359895 OR52B2Q96RD2 323 aa18.3■□□□□ 0.52
PDLIM7-203ENST00000359895 SLC22A12Q96S37 553 aa18.3■□□□□ 0.52
PDLIM7-203ENST00000359895 UNKQ9C0B0 810 aaKnown RBP18.3■□□□□ 0.52
PDLIM7-203ENST00000359895 SYTL2Q9HCH5 934 aa18.3■□□□□ 0.52
PDLIM7-203ENST00000359895 MRGBPQ9NV56 204 aa18.3■□□□□ 0.52
PDLIM7-203ENST00000359895 PCDHGC4Q9Y5F7 938 aa18.3■□□□□ 0.52
PDLIM7-203ENST00000359895 OR51B4Q9Y5P0 310 aa18.3■□□□□ 0.52
PDLIM7-203ENST00000359895 GOLGA8QA0A0J9YX86 632 aa18.29■□□□□ 0.52
PDLIM7-203ENST00000359895 GOLGA8OA6NCC3 632 aa18.29■□□□□ 0.52
PDLIM7-203ENST00000359895 GOLGA8NF8WBI6 632 aa18.29■□□□□ 0.52
PDLIM7-203ENST00000359895 DCXO43602 365 aa18.29■□□□□ 0.52
PDLIM7-203ENST00000359895 SNAP91O60641 907 aa18.29■□□□□ 0.52
PDLIM7-203ENST00000359895 ENTPD5O75356 428 aa18.29■□□□□ 0.52
PDLIM7-203ENST00000359895 SLC4A1P02730 911 aa18.29■□□□□ 0.52
PDLIM7-203ENST00000359895 LRG1P02750 347 aa18.29■□□□□ 0.52
PDLIM7-203ENST00000359895 TPBGLP0DKB5 382 aa18.29■□□□□ 0.52
PDLIM7-203ENST00000359895 COX4I1P13073 169 aa18.29■□□□□ 0.52
PDLIM7-203ENST00000359895 RAG1P15918 1043 aa18.29■□□□□ 0.52
PDLIM7-203ENST00000359895 PFKLP17858 780 aa18.29■□□□□ 0.52
PDLIM7-203ENST00000359895 IMPDH1P20839 514 aa18.29■□□□□ 0.52
PDLIM7-203ENST00000359895 GABRR2P28476 465 aa18.29■□□□□ 0.52
PDLIM7-203ENST00000359895 MZF1P28698 734 aaPredicted RBP18.29■□□□□ 0.52
PDLIM7-203ENST00000359895 CPOXP36551 454 aa18.29■□□□□ 0.52
PDLIM7-203ENST00000359895 CCR10P46092 362 aa18.29■□□□□ 0.52
PDLIM7-203ENST00000359895 CCNG1P51959 295 aa18.29■□□□□ 0.52
PDLIM7-203ENST00000359895 RHOAP61586 193 aa18.29■□□□□ 0.52
PDLIM7-203ENST00000359895 SLC7A9P82251 487 aa18.29■□□□□ 0.52
PDLIM7-203ENST00000359895 NFKB2Q00653 900 aa18.29■□□□□ 0.52
PDLIM7-203ENST00000359895 SATB1Q01826 763 aa18.29■□□□□ 0.52
PDLIM7-203ENST00000359895 PDAP1Q13442 181 aaKnown RBP18.29■□□□□ 0.52
PDLIM7-203ENST00000359895 KPNB1Q14974 876 aaKnown RBP18.29■□□□□ 0.52
PDLIM7-203ENST00000359895 ZRSR2Q15696 482 aaKnown RBP18.29■□□□□ 0.52
PDLIM7-203ENST00000359895 LRRC26Q2I0M4 334 aa18.29■□□□□ 0.52
PDLIM7-203ENST00000359895 TRMT5Q32P41 509 aaKnown RBP18.29■□□□□ 0.52
PDLIM7-203ENST00000359895 LSM12Q3MHD2 195 aaKnown RBP18.29■□□□□ 0.52
PDLIM7-203ENST00000359895 TXNDC8Q6A555 127 aa18.29■□□□□ 0.52
PDLIM7-203ENST00000359895 TMEM207Q6UWW9 146 aa18.29■□□□□ 0.52
PDLIM7-203ENST00000359895 ISCA2Q86U28 154 aa18.29■□□□□ 0.52
PDLIM7-203ENST00000359895 CPXM2Q8N436 756 aa18.29■□□□□ 0.52
PDLIM7-203ENST00000359895 CPSF7Q8N684 471 aaKnown RBP18.29■□□□□ 0.52
PDLIM7-203ENST00000359895 FBXO27Q8NI29 283 aa18.29■□□□□ 0.52
PDLIM7-203ENST00000359895 L3HYPDHQ96EM0 354 aa18.29■□□□□ 0.52
PDLIM7-203ENST00000359895 THTPAQ9BU02 230 aa18.29■□□□□ 0.52
PDLIM7-203ENST00000359895 CCDC68Q9H2F9 335 aa18.29■□□□□ 0.52
PDLIM7-203ENST00000359895 MAN1C1Q9NR34 630 aa18.29■□□□□ 0.52
PDLIM7-203ENST00000359895 MTCL1Q9Y4B5 1905 aaKnown RBP18.28■□□□□ 0.52
PDLIM7-203ENST00000359895 MKI67P46013 3256 aaKnown RBP18.28■□□□□ 0.52
PDLIM7-203ENST00000359895 NDUFS3O75489 264 aa18.28■□□□□ 0.52
PDLIM7-203ENST00000359895 FGF18O76093 207 aa18.28■□□□□ 0.52
PDLIM7-203ENST00000359895 PDHA1P08559 390 aa18.28■□□□□ 0.52
PDLIM7-203ENST00000359895 THRAP10827 490 aa18.28■□□□□ 0.52
PDLIM7-203ENST00000359895 CD1DP15813 335 aa18.28■□□□□ 0.52
PDLIM7-203ENST00000359895 CSKP41240 450 aa18.28■□□□□ 0.52
PDLIM7-203ENST00000359895 GJA8P48165 433 aa18.28■□□□□ 0.52
PDLIM7-203ENST00000359895 AP1S1P61966 158 aa18.28■□□□□ 0.52
PDLIM7-203ENST00000359895 TRAF2Q12933 501 aa18.28■□□□□ 0.52
PDLIM7-203ENST00000359895 LINGO4Q6UY18 593 aa18.28■□□□□ 0.52
PDLIM7-203ENST00000359895 HTR3DQ70Z44 454 aa18.28■□□□□ 0.52
PDLIM7-203ENST00000359895 ULK2Q8IYT8 1036 aa18.28■□□□□ 0.52
PDLIM7-203ENST00000359895 ELMOD1Q8N336 334 aa18.28■□□□□ 0.52
PDLIM7-203ENST00000359895 RHEBL1Q8TAI7 183 aa18.28■□□□□ 0.52
PDLIM7-203ENST00000359895 STMN2Q93045 179 aa18.28■□□□□ 0.52
PDLIM7-203ENST00000359895 MOCOSQ96EN8 888 aa18.28■□□□□ 0.52
PDLIM7-203ENST00000359895 C2orf49Q9BVC5 232 aaPredicted RBP18.28■□□□□ 0.52
PDLIM7-203ENST00000359895 TMEM106CQ9BVX2 250 aa18.28■□□□□ 0.52
PDLIM7-203ENST00000359895 NUF2Q9BZD4 464 aa18.28■□□□□ 0.52
PDLIM7-203ENST00000359895 ALG9Q9H6U8 611 aa18.28■□□□□ 0.52
PDLIM7-203ENST00000359895 TAS2R13Q9NYV9 303 aa18.28■□□□□ 0.52
PDLIM7-203ENST00000359895 GTSE1Q9NYZ3 720 aa18.28■□□□□ 0.52
PDLIM7-203ENST00000359895 DNMT3BQ9UBC3 853 aaKnown RBP18.28■□□□□ 0.52
PDLIM7-203ENST00000359895 NKX1-2Q9UD57 310 aaPredicted RBP18.28■□□□□ 0.52
PDLIM7-203ENST00000359895 VPS51Q9UID3 782 aa18.28■□□□□ 0.52
PDLIM7-203ENST00000359895 C15orf41Q9Y2V0 281 aa18.28■□□□□ 0.52
PDLIM7-203ENST00000359895 SH3BP1Q9Y3L3 701 aa18.28■□□□□ 0.52
PDLIM7-203ENST00000359895 TRIM43BA6NCK2 446 aa18.27■□□□□ 0.52
PDLIM7-203ENST00000359895 NEMP2A6NFY4 417 aa18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms