RNA–Protein interactions for RNA: ENST00000359060.5

SSU72-202, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2 BASIC

Gene SSU72, Length 4,176 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-202ENST00000359060 CSNK1G1Q9HCP0 422 aa11.2□□□□□ -0.62
SSU72-202ENST00000359060 WDR81Q562E7 1941 aa11.2□□□□□ -0.62
SSU72-202ENST00000359060 MYO9BQ13459 2157 aa11.2□□□□□ -0.62
SSU72-202ENST00000359060 HHLA1C9JL84 531 aa11.2□□□□□ -0.62
SSU72-202ENST00000359060 SYN3O14994 580 aa11.2□□□□□ -0.62
SSU72-202ENST00000359060 ACSL4O60488 711 aa11.2□□□□□ -0.62
SSU72-202ENST00000359060 ARSDP51689 593 aa11.2□□□□□ -0.62
SSU72-202ENST00000359060 ZNF33AQ06730 810 aa11.2□□□□□ -0.62
SSU72-202ENST00000359060 ACAP2Q15057 778 aa11.2□□□□□ -0.62
SSU72-202ENST00000359060 NR6A1Q15406 480 aa11.2□□□□□ -0.62
SSU72-202ENST00000359060 CES4AQ5XG92 561 aa11.2□□□□□ -0.62
SSU72-202ENST00000359060 ZFP1Q6P2D0 407 aa11.2□□□□□ -0.62
SSU72-202ENST00000359060 TLDC1Q6P9B6 456 aa11.2□□□□□ -0.62
SSU72-202ENST00000359060 TPGS1Q6ZTW0 290 aa11.2□□□□□ -0.62
SSU72-202ENST00000359060 MRPL10Q7Z7H8 261 aaKnown RBP11.2□□□□□ -0.62
SSU72-202ENST00000359060 GPSM1Q86YR5 675 aa11.2□□□□□ -0.62
SSU72-202ENST00000359060 CDYL2Q8N8U2 506 aa11.2□□□□□ -0.62
SSU72-202ENST00000359060 SPDYE1Q8NFV5 336 aaPredicted RBP11.2□□□□□ -0.62
SSU72-202ENST00000359060 SCLYQ96I15 445 aa11.2□□□□□ -0.62
SSU72-202ENST00000359060 GPR21Q99679 349 aa11.2□□□□□ -0.62
SSU72-202ENST00000359060 C1orf50Q9BV19 199 aa11.2□□□□□ -0.62
SSU72-202ENST00000359060 STK39Q9UEW8 545 aa11.2□□□□□ -0.62
SSU72-202ENST00000359060 EGFL7Q9UHF1 273 aa11.2□□□□□ -0.62
SSU72-202ENST00000359060 PSMD13Q9UNM6 376 aa11.2□□□□□ -0.62
SSU72-202ENST00000359060 MYO7AQ13402 2215 aa11.2□□□□□ -0.62
SSU72-202ENST00000359060 RLFQ13129 1914 aa11.2□□□□□ -0.62
SSU72-202ENST00000359060 A0A0D9SEW6 157 aa11.2□□□□□ -0.62
SSU72-202ENST00000359060 TRIM38O00635 465 aa11.2□□□□□ -0.62
SSU72-202ENST00000359060 LYNP07948 512 aa11.2□□□□□ -0.62
SSU72-202ENST00000359060 SPATA31D3P0C874 917 aa11.2□□□□□ -0.62
SSU72-202ENST00000359060 IL2P60568 153 aa11.2□□□□□ -0.62
SSU72-202ENST00000359060 PDK3Q15120 406 aa11.2□□□□□ -0.62
SSU72-202ENST00000359060 MSANTD2Q6P1R3 559 aa11.2□□□□□ -0.62
SSU72-202ENST00000359060 SPATA31D4Q6ZUB0 917 aa11.2□□□□□ -0.62
SSU72-202ENST00000359060 C2CD4AQ8NCU7 369 aaPredicted RBP11.2□□□□□ -0.62
SSU72-202ENST00000359060 OR9I1Q8NGQ6 314 aa11.2□□□□□ -0.62
SSU72-202ENST00000359060 DNAJB14Q8TBM8 379 aa11.2□□□□□ -0.62
SSU72-202ENST00000359060 METTL6Q8TCB7 284 aa11.2□□□□□ -0.62
SSU72-202ENST00000359060 CYGBQ8WWM9 190 aa11.2□□□□□ -0.62
SSU72-202ENST00000359060 HBEGFQ99075 208 aa11.2□□□□□ -0.62
SSU72-202ENST00000359060 ACOX2Q99424 681 aa11.2□□□□□ -0.62
SSU72-202ENST00000359060 MRPL9Q9BYD2 267 aaKnown RBP11.2□□□□□ -0.62
SSU72-202ENST00000359060 WWOXQ9NZC7 414 aa11.2□□□□□ -0.62
SSU72-202ENST00000359060 ZMYM5Q9UJ78 669 aa11.2□□□□□ -0.62
SSU72-202ENST00000359060 AP4S1Q9Y587 144 aa11.2□□□□□ -0.62
SSU72-202ENST00000359060 TLL2Q9Y6L7 1015 aa11.2□□□□□ -0.62
SSU72-202ENST00000359060 INPP4BO15327 924 aa11.19□□□□□ -0.62
SSU72-202ENST00000359060 NRP2O60462 931 aa11.19□□□□□ -0.62
SSU72-202ENST00000359060 SYNCRIPO60506 623 aaKnown RBP11.19□□□□□ -0.62
SSU72-202ENST00000359060 C1RP00736 705 aa11.19□□□□□ -0.62
SSU72-202ENST00000359060 SELPP16109 830 aa11.19□□□□□ -0.62
SSU72-202ENST00000359060 PSMC3P17980 439 aa11.19□□□□□ -0.62
SSU72-202ENST00000359060 LBPP18428 481 aa11.19□□□□□ -0.62
SSU72-202ENST00000359060 HDCP19113 662 aa11.19□□□□□ -0.62
SSU72-202ENST00000359060 LPOP22079 712 aaPredicted RBP11.19□□□□□ -0.62
SSU72-202ENST00000359060 AKT1P31749 480 aa11.19□□□□□ -0.62
SSU72-202ENST00000359060 MC4RP32245 332 aa11.19□□□□□ -0.62
SSU72-202ENST00000359060 RPL34P49207 117 aaKnown RBP11.19□□□□□ -0.62
SSU72-202ENST00000359060 HK2P52789 917 aa11.19□□□□□ -0.62
SSU72-202ENST00000359060 ESRRGP62508 458 aa11.19□□□□□ -0.62
SSU72-202ENST00000359060 FOLH1Q04609 750 aa11.19□□□□□ -0.62
SSU72-202ENST00000359060 AARS2Q5JTZ9 985 aaKnown RBP11.19□□□□□ -0.62
SSU72-202ENST00000359060 SAMD4BQ5PRF9 694 aaKnown RBP11.19□□□□□ -0.62
SSU72-202ENST00000359060 TBCELQ5QJ74 424 aa11.19□□□□□ -0.62
SSU72-202ENST00000359060 CENPLQ8N0S6 344 aaPredicted RBP11.19□□□□□ -0.62
SSU72-202ENST00000359060 PGAM4Q8N0Y7 254 aa11.19□□□□□ -0.62
SSU72-202ENST00000359060 NMD3Q96D46 503 aaKnown RBP11.19□□□□□ -0.62
SSU72-202ENST00000359060 ZIC5Q96T25 663 aa11.19□□□□□ -0.62
SSU72-202ENST00000359060 PRPF18Q99633 342 aaKnown RBP11.19□□□□□ -0.62
SSU72-202ENST00000359060 PCDHAC1Q9H158 963 aa11.19□□□□□ -0.62
SSU72-202ENST00000359060 PAPOLBQ9NRJ5 636 aaKnown RBP11.19□□□□□ -0.62
SSU72-202ENST00000359060 MARCH4Q9P2E8 410 aaPredicted RBP11.19□□□□□ -0.62
SSU72-202ENST00000359060 M0QZQ0 153 aa11.19□□□□□ -0.62
SSU72-202ENST00000359060 NPHS1O60500 1241 aa11.19□□□□□ -0.62
SSU72-202ENST00000359060 TBL1XO60907 577 aa11.19□□□□□ -0.62
SSU72-202ENST00000359060 CLPTM1O96005 669 aa11.19□□□□□ -0.62
SSU72-202ENST00000359060 CYP11A1P05108 521 aa11.19□□□□□ -0.62
SSU72-202ENST00000359060 NFKBIAP25963 317 aa11.19□□□□□ -0.62
SSU72-202ENST00000359060 POLD2P49005 469 aa11.19□□□□□ -0.62
SSU72-202ENST00000359060 TSNQ15631 228 aaKnown RBP11.19□□□□□ -0.62
SSU72-202ENST00000359060 TMEM259Q4ZIN3 620 aa11.19□□□□□ -0.62
SSU72-202ENST00000359060 AP1ARQ63HQ0 302 aa11.19□□□□□ -0.62
SSU72-202ENST00000359060 KCTD11Q693B1 232 aa11.19□□□□□ -0.62
SSU72-202ENST00000359060 PAOXQ6QHF9 649 aa11.19□□□□□ -0.62
SSU72-202ENST00000359060 RANBP10Q6VN20 620 aa11.19□□□□□ -0.62
SSU72-202ENST00000359060 NRG4Q8WWG1 115 aa11.19□□□□□ -0.62
SSU72-202ENST00000359060 C19orf60Q96EN9 201 aa11.19□□□□□ -0.62
SSU72-202ENST00000359060 CDK5RAP1Q96SZ6 601 aaKnown RBP11.19□□□□□ -0.62
SSU72-202ENST00000359060 OLFM1Q99784 485 aa11.19□□□□□ -0.62
SSU72-202ENST00000359060 SPAG4Q9NPE6 437 aa11.19□□□□□ -0.62
SSU72-202ENST00000359060 TMEM161AQ9NX61 479 aa11.19□□□□□ -0.62
SSU72-202ENST00000359060 NIPSNAP3AQ9UFN0 247 aaPredicted RBP11.19□□□□□ -0.62
SSU72-202ENST00000359060 SMNDC1O75940 238 aaKnown RBP eCLIP11.19□□□□□ -0.62
SSU72-202ENST00000359060 URODP06132 367 aa11.19□□□□□ -0.62
SSU72-202ENST00000359060 FOXD4Q12950 439 aaPredicted RBP11.19□□□□□ -0.62
SSU72-202ENST00000359060 RNF19BQ6ZMZ0 732 aa11.19□□□□□ -0.62
SSU72-202ENST00000359060 CILP2Q8IUL8 1156 aa11.19□□□□□ -0.62
SSU72-202ENST00000359060 SEPHS2Q99611 448 aa11.19□□□□□ -0.62
SSU72-202ENST00000359060 SLC39A3Q9BRY0 314 aa11.19□□□□□ -0.62
SSU72-202ENST00000359060 FBRSL1Q9HCM7 1045 aaKnown RBP11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms