RNA–Protein interactions for RNA: ENST00000359031.8

GABPB1-202, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 5 BASIC

Gene GABPB1, Length 1,633 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-202ENST00000359031 NFKB2Q00653 900 aa14.91□□□□□ -0.02
GABPB1-202ENST00000359031 SATB1Q01826 763 aa14.91□□□□□ -0.02
GABPB1-202ENST00000359031 GALNT1Q10472 559 aaPredicted RBP14.91□□□□□ -0.02
GABPB1-202ENST00000359031 PABPC1LQ4VXU2 614 aaKnown RBP14.91□□□□□ -0.02
GABPB1-202ENST00000359031 ACSBG2Q5FVE4 666 aa14.91□□□□□ -0.02
GABPB1-202ENST00000359031 RALGPS1Q5JS13 557 aa14.91□□□□□ -0.02
GABPB1-202ENST00000359031 C16orf59Q7L2K0 433 aa14.91□□□□□ -0.02
GABPB1-202ENST00000359031 TMEM150AQ86TG1 271 aa14.91□□□□□ -0.02
GABPB1-202ENST00000359031 KDM1BQ8NB78 822 aa14.91□□□□□ -0.02
GABPB1-202ENST00000359031 STMN2Q93045 179 aa14.91□□□□□ -0.02
GABPB1-202ENST00000359031 WBP2Q969T9 261 aa14.91□□□□□ -0.02
GABPB1-202ENST00000359031 RMDN1Q96DB5 314 aa14.91□□□□□ -0.02
GABPB1-202ENST00000359031 SGF29Q96ES7 293 aa14.91□□□□□ -0.02
GABPB1-202ENST00000359031 CDKN2AIPNLQ96HQ2 116 aa14.91□□□□□ -0.02
GABPB1-202ENST00000359031 EXOC2Q96KP1 924 aa14.91□□□□□ -0.02
GABPB1-202ENST00000359031 OR52B2Q96RD2 323 aa14.91□□□□□ -0.02
GABPB1-202ENST00000359031 AARSD1Q9BTE6 412 aaKnown RBP14.91□□□□□ -0.02
GABPB1-202ENST00000359031 ADGRE3Q9BY15 652 aa14.91□□□□□ -0.02
GABPB1-202ENST00000359031 SUDS3Q9H7L9 328 aaPredicted RBP14.91□□□□□ -0.02
GABPB1-202ENST00000359031 EML4Q9HC35 981 aaKnown RBP14.91□□□□□ -0.02
GABPB1-202ENST00000359031 MRPL17Q9NRX2 175 aaKnown RBP14.91□□□□□ -0.02
GABPB1-202ENST00000359031 SPO11Q9Y5K1 396 aa14.91□□□□□ -0.02
GABPB1-202ENST00000359031 C2orf81A6NN90 581 aa14.9□□□□□ -0.02
GABPB1-202ENST00000359031 DCXO43602 365 aa14.9□□□□□ -0.02
GABPB1-202ENST00000359031 ZBTB14O43829 449 aa14.9□□□□□ -0.02
GABPB1-202ENST00000359031 TBL1XO60907 577 aa14.9□□□□□ -0.02
GABPB1-202ENST00000359031 TMCC1O94876 653 aa14.9□□□□□ -0.02
GABPB1-202ENST00000359031 LUC7L3O95232 432 aaKnown RBP14.9□□□□□ -0.02
GABPB1-202ENST00000359031 PIRTP0C851 137 aa14.9□□□□□ -0.02
GABPB1-202ENST00000359031 CCR10P46092 362 aa14.9□□□□□ -0.02
GABPB1-202ENST00000359031 DEFB103AP81534 67 aa14.9□□□□□ -0.02
GABPB1-202ENST00000359031 SEMA3AQ14563 771 aa14.9□□□□□ -0.02
GABPB1-202ENST00000359031 KHDC1Q4VXA5 237 aaKnown RBP14.9□□□□□ -0.02
GABPB1-202ENST00000359031 INO80DQ53TQ3 878 aaPredicted RBP14.9□□□□□ -0.02
GABPB1-202ENST00000359031 C9orf50Q5SZB4 431 aa14.9□□□□□ -0.02
GABPB1-202ENST00000359031 ZNF549Q6P9A3 640 aa14.9□□□□□ -0.02
GABPB1-202ENST00000359031 RNF135Q8IUD6 432 aa14.9□□□□□ -0.02
GABPB1-202ENST00000359031 FAM217AQ8IXS0 508 aa14.9□□□□□ -0.02
GABPB1-202ENST00000359031 PHTF2Q8N3S3 785 aa14.9□□□□□ -0.02
GABPB1-202ENST00000359031 CPSF7Q8N684 471 aaKnown RBP14.9□□□□□ -0.02
GABPB1-202ENST00000359031 ANKRD49Q8WVL7 239 aa14.9□□□□□ -0.02
GABPB1-202ENST00000359031 BADQ92934 168 aa14.9□□□□□ -0.02
GABPB1-202ENST00000359031 TCF12Q99081 682 aa14.9□□□□□ -0.02
GABPB1-202ENST00000359031 THTPAQ9BU02 230 aa14.9□□□□□ -0.02
GABPB1-202ENST00000359031 TRMOQ9BU70 441 aa14.9□□□□□ -0.02
GABPB1-202ENST00000359031 UNKQ9C0B0 810 aaKnown RBP14.9□□□□□ -0.02
GABPB1-202ENST00000359031 ZNF385DQ9H6B1 395 aa14.9□□□□□ -0.02
GABPB1-202ENST00000359031 ZNF334Q9HCZ1 680 aaPredicted RBP14.9□□□□□ -0.02
GABPB1-202ENST00000359031 PRDM6Q9NQX0 595 aa14.9□□□□□ -0.02
GABPB1-202ENST00000359031 MAN1C1Q9NR34 630 aa14.9□□□□□ -0.02
GABPB1-202ENST00000359031 MRGBPQ9NV56 204 aa14.9□□□□□ -0.02
GABPB1-202ENST00000359031 SMPD4Q9NXE4 827 aa14.9□□□□□ -0.02
GABPB1-202ENST00000359031 VPS9D1Q9Y2B5 631 aa14.9□□□□□ -0.02
GABPB1-202ENST00000359031 ASB3Q9Y575 518 aa14.9□□□□□ -0.02
GABPB1-202ENST00000359031 RAI2Q9Y5P3 530 aa14.9□□□□□ -0.02
GABPB1-202ENST00000359031 PTPRSQ13332 1948 aa14.89□□□□□ -0.03
GABPB1-202ENST00000359031 GOLGA8QA0A0J9YX86 632 aa14.89□□□□□ -0.03
GABPB1-202ENST00000359031 GOLGA8OA6NCC3 632 aa14.89□□□□□ -0.03
GABPB1-202ENST00000359031 GOLGA8NF8WBI6 632 aa14.89□□□□□ -0.03
GABPB1-202ENST00000359031 H0Y626 953 aa14.89□□□□□ -0.03
GABPB1-202ENST00000359031 GFRA2O00451 464 aa14.89□□□□□ -0.03
GABPB1-202ENST00000359031 NEMP1O14524 444 aa14.89□□□□□ -0.03
GABPB1-202ENST00000359031 BUD23O43709 281 aaKnown RBP14.89□□□□□ -0.03
GABPB1-202ENST00000359031 ZMPSTE24O75844 475 aa14.89□□□□□ -0.03
GABPB1-202ENST00000359031 PSMG1O95456 288 aa14.89□□□□□ -0.03
GABPB1-202ENST00000359031 PRLP01236 227 aa14.89□□□□□ -0.03
GABPB1-202ENST00000359031 COX4I1P13073 169 aa14.89□□□□□ -0.03
GABPB1-202ENST00000359031 PMLP29590 882 aa14.89□□□□□ -0.03
GABPB1-202ENST00000359031 WDR5P61964 334 aaKnown RBP14.89□□□□□ -0.03
GABPB1-202ENST00000359031 PTPRCAPQ14761 206 aa14.89□□□□□ -0.03
GABPB1-202ENST00000359031 HERC3Q15034 1050 aa14.89□□□□□ -0.03
GABPB1-202ENST00000359031 ZRSR2Q15696 482 aaKnown RBP14.89□□□□□ -0.03
GABPB1-202ENST00000359031 LSM12Q3MHD2 195 aaKnown RBP14.89□□□□□ -0.03
GABPB1-202ENST00000359031 ACCSLQ4AC99 568 aa14.89□□□□□ -0.03
GABPB1-202ENST00000359031 GPR158Q5T848 1215 aa14.89□□□□□ -0.03
GABPB1-202ENST00000359031 NCEH1Q6PIU2 408 aa14.89□□□□□ -0.03
GABPB1-202ENST00000359031 Q6ZNB5 142 aa14.89□□□□□ -0.03
GABPB1-202ENST00000359031 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP14.89□□□□□ -0.03
GABPB1-202ENST00000359031 CARNMT1Q8N4J0 409 aa14.89□□□□□ -0.03
GABPB1-202ENST00000359031 POU5F2Q8N7G0 328 aa14.89□□□□□ -0.03
GABPB1-202ENST00000359031 LPCAT1Q8NF37 534 aa14.89□□□□□ -0.03
GABPB1-202ENST00000359031 WDR60Q8WVS4 1066 aa14.89□□□□□ -0.03
GABPB1-202ENST00000359031 L3HYPDHQ96EM0 354 aa14.89□□□□□ -0.03
GABPB1-202ENST00000359031 MOCOSQ96EN8 888 aa14.89□□□□□ -0.03
GABPB1-202ENST00000359031 MAELQ96JY0 434 aaKnown RBP14.89□□□□□ -0.03
GABPB1-202ENST00000359031 NSMCE3Q96MG7 304 aa14.89□□□□□ -0.03
GABPB1-202ENST00000359031 RTKNQ9BST9 563 aa14.89□□□□□ -0.03
GABPB1-202ENST00000359031 NUF2Q9BZD4 464 aa14.89□□□□□ -0.03
GABPB1-202ENST00000359031 IL21Q9HBE4 155 aa14.89□□□□□ -0.03
GABPB1-202ENST00000359031 HACD3Q9P035 362 aa14.89□□□□□ -0.03
GABPB1-202ENST00000359031 STOML1Q9UBI4 398 aa14.89□□□□□ -0.03
GABPB1-202ENST00000359031 LHX3Q9UBR4 397 aa14.89□□□□□ -0.03
GABPB1-202ENST00000359031 MCM8Q9UJA3 840 aa14.89□□□□□ -0.03
GABPB1-202ENST00000359031 ARHGAP26Q9UNA1 814 aa14.89□□□□□ -0.03
GABPB1-202ENST00000359031 CRYL1Q9Y2S2 319 aa14.89□□□□□ -0.03
GABPB1-202ENST00000359031 SEC23IPQ9Y6Y8 1000 aaKnown RBP14.89□□□□□ -0.03
GABPB1-202ENST00000359031 NEMP2A6NFY4 417 aa14.88□□□□□ -0.03
GABPB1-202ENST00000359031 H0Y3Z8 333 aa14.88□□□□□ -0.03
GABPB1-202ENST00000359031 SMIM24O75264 130 aa14.88□□□□□ -0.03
GABPB1-202ENST00000359031 SLC4A1P02730 911 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms