RNA–Protein interactions for RNA: ENST00000358730.6

RFX3-202, Transcript of regulatory factor X3, humanhuman

TSL 1 (best) BASIC

Gene RFX3, Length 2,971 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-202ENST00000358730 C3orf30Q96M34 536 aa8.6□□□□□ -1.03
RFX3-202ENST00000358730 TBATAQ96M53 351 aa8.6□□□□□ -1.03
RFX3-202ENST00000358730 PLK2Q9NYY3 685 aa8.6□□□□□ -1.03
RFX3-202ENST00000358730 PCDHB8Q9UN66 801 aa8.6□□□□□ -1.03
RFX3-202ENST00000358730 PTGDR2Q9Y5Y4 395 aa8.6□□□□□ -1.03
RFX3-202ENST00000358730 ARL5AQ9Y689 179 aa8.6□□□□□ -1.03
RFX3-202ENST00000358730 CLGNO14967 610 aa8.6□□□□□ -1.03
RFX3-202ENST00000358730 B4GALT3O60512 393 aa8.6□□□□□ -1.03
RFX3-202ENST00000358730 RAMP2O60895 175 aa8.6□□□□□ -1.03
RFX3-202ENST00000358730 RTN3O95197 1032 aaPredicted RBP8.6□□□□□ -1.03
RFX3-202ENST00000358730 SIX3O95343 332 aaPredicted RBP8.6□□□□□ -1.03
RFX3-202ENST00000358730 GLP2RO95838 553 aa8.6□□□□□ -1.03
RFX3-202ENST00000358730 GOT2P00505 430 aaKnown RBP8.6□□□□□ -1.03
RFX3-202ENST00000358730 HMBSP08397 361 aa8.6□□□□□ -1.03
RFX3-202ENST00000358730 FDXRP22570 491 aa8.6□□□□□ -1.03
RFX3-202ENST00000358730 PAX3P23760 479 aa8.6□□□□□ -1.03
RFX3-202ENST00000358730 SLC26A3P40879 764 aa8.6□□□□□ -1.03
RFX3-202ENST00000358730 USP46P62068 366 aa8.6□□□□□ -1.03
RFX3-202ENST00000358730 TRAP1Q12931 704 aaKnown RBP8.6□□□□□ -1.03
RFX3-202ENST00000358730 MAP7Q14244 749 aa8.6□□□□□ -1.03
RFX3-202ENST00000358730 DSC3Q14574 896 aa8.6□□□□□ -1.03
RFX3-202ENST00000358730 PTPRCAPQ14761 206 aa8.6□□□□□ -1.03
RFX3-202ENST00000358730 PITRM1Q5JRX3 1037 aa8.6□□□□□ -1.03
RFX3-202ENST00000358730 ARRDC2Q8TBH0 407 aa8.6□□□□□ -1.03
RFX3-202ENST00000358730 GPR152Q8TDT2 470 aa8.6□□□□□ -1.03
RFX3-202ENST00000358730 FATE1Q969F0 183 aa8.6□□□□□ -1.03
RFX3-202ENST00000358730 IGSF8Q969P0 613 aa8.6□□□□□ -1.03
RFX3-202ENST00000358730 PPWD1Q96BP3 646 aaKnown RBP8.6□□□□□ -1.03
RFX3-202ENST00000358730 DGCR14Q96DF8 476 aaKnown RBP8.6□□□□□ -1.03
RFX3-202ENST00000358730 SEMA3CQ99985 751 aa8.6□□□□□ -1.03
RFX3-202ENST00000358730 UPF3AQ9H1J1 476 aaKnown RBP8.6□□□□□ -1.03
RFX3-202ENST00000358730 COQ10BQ9H8M1 238 aa8.6□□□□□ -1.03
RFX3-202ENST00000358730 SPC25Q9HBM1 224 aa8.6□□□□□ -1.03
RFX3-202ENST00000358730 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP8.6□□□□□ -1.03
RFX3-202ENST00000358730 TMEM181Q9P2C4 612 aa8.6□□□□□ -1.03
RFX3-202ENST00000358730 CNOT11Q9UKZ1 510 aaKnown RBP8.6□□□□□ -1.03
RFX3-202ENST00000358730 CNOT6Q9ULM6 557 aaKnown RBP8.6□□□□□ -1.03
RFX3-202ENST00000358730 BRCA2P51587 3418 aa8.6□□□□□ -1.03
RFX3-202ENST00000358730 TCRBV3S1A0A5B6 114 aa8.59□□□□□ -1.03
RFX3-202ENST00000358730 ZNF839A8K0R7 811 aa8.59□□□□□ -1.03
RFX3-202ENST00000358730 TBX18O95935 607 aa8.59□□□□□ -1.03
RFX3-202ENST00000358730 PIRTP0C851 137 aa8.59□□□□□ -1.03
RFX3-202ENST00000358730 SPATA31D3P0C874 917 aa8.59□□□□□ -1.03
RFX3-202ENST00000358730 CD1DP15813 335 aa8.59□□□□□ -1.03
RFX3-202ENST00000358730 SLC7A1P30825 629 aa8.59□□□□□ -1.03
RFX3-202ENST00000358730 ACADVLP49748 655 aa8.59□□□□□ -1.03
RFX3-202ENST00000358730 ATP4BP51164 291 aa8.59□□□□□ -1.03
RFX3-202ENST00000358730 SH3BP2P78314 561 aa8.59□□□□□ -1.03
RFX3-202ENST00000358730 GALNT3Q14435 633 aa8.59□□□□□ -1.03
RFX3-202ENST00000358730 POLD3Q15054 466 aaPredicted RBP8.59□□□□□ -1.03
RFX3-202ENST00000358730 CYTH1Q15438 398 aa8.59□□□□□ -1.03
RFX3-202ENST00000358730 PFKFB4Q16877 469 aa8.59□□□□□ -1.03
RFX3-202ENST00000358730 FBXL22Q6P050 247 aa8.59□□□□□ -1.03
RFX3-202ENST00000358730 ZNF549Q6P9A3 640 aa8.59□□□□□ -1.03
RFX3-202ENST00000358730 SPATA31D4Q6ZUB0 917 aa8.59□□□□□ -1.03
RFX3-202ENST00000358730 RAB44Q7Z6P3 723 aaPredicted RBP8.59□□□□□ -1.03
RFX3-202ENST00000358730 AMIGO2Q86SJ2 522 aa8.59□□□□□ -1.03
RFX3-202ENST00000358730 CHERPQ8IWX8 916 aaKnown RBP8.59□□□□□ -1.03
RFX3-202ENST00000358730 TEX26Q8N6G2 289 aa8.59□□□□□ -1.03
RFX3-202ENST00000358730 ATP6V0D2Q8N8Y2 350 aa8.59□□□□□ -1.03
RFX3-202ENST00000358730 PCYOX1LQ8NBM8 494 aa8.59□□□□□ -1.03
RFX3-202ENST00000358730 SLCO4A1Q96BD0 722 aa8.59□□□□□ -1.03
RFX3-202ENST00000358730 MPP4Q96JB8 637 aa8.59□□□□□ -1.03
RFX3-202ENST00000358730 RPRD1AQ96P16 312 aaPredicted RBP8.59□□□□□ -1.03
RFX3-202ENST00000358730 EFHD1Q9BUP0 239 aa8.59□□□□□ -1.03
RFX3-202ENST00000358730 SLC2A11Q9BYW1 496 aa8.59□□□□□ -1.03
RFX3-202ENST00000358730 ZCWPW1Q9H0M4 648 aa8.59□□□□□ -1.03
RFX3-202ENST00000358730 FBXO44Q9H4M3 255 aa8.59□□□□□ -1.03
RFX3-202ENST00000358730 AKTIPQ9H8T0 292 aa8.59□□□□□ -1.03
RFX3-202ENST00000358730 IL1RL2Q9HB29 575 aa8.59□□□□□ -1.03
RFX3-202ENST00000358730 MID1IP1Q9NPA3 183 aa8.59□□□□□ -1.03
RFX3-202ENST00000358730 POLR3BQ9NW08 1133 aaPredicted RBP8.59□□□□□ -1.03
RFX3-202ENST00000358730 PTTG2Q9NZH5 202 aa8.59□□□□□ -1.03
RFX3-202ENST00000358730 GIMAP2Q9UG22 337 aa8.59□□□□□ -1.03
RFX3-202ENST00000358730 CD300AQ9UGN4 299 aa8.59□□□□□ -1.03
RFX3-202ENST00000358730 A0A0J9YYE9 177 aa8.59□□□□□ -1.03
RFX3-202ENST00000358730 A0A1B0GVG6 124 aa8.59□□□□□ -1.03
RFX3-202ENST00000358730 C7orf72A4D263 438 aa8.59□□□□□ -1.03
RFX3-202ENST00000358730 LRRC14BA6NHZ5 514 aa8.59□□□□□ -1.03
RFX3-202ENST00000358730 UBXN8O00124 270 aa8.59□□□□□ -1.03
RFX3-202ENST00000358730 PIP5K1BO14986 540 aa8.59□□□□□ -1.03
RFX3-202ENST00000358730 VILLO15195 856 aa8.59□□□□□ -1.03
RFX3-202ENST00000358730 CD3EAPO15446 510 aaKnown RBP8.59□□□□□ -1.03
RFX3-202ENST00000358730 PENKP01210 267 aaPredicted RBP8.59□□□□□ -1.03
RFX3-202ENST00000358730 RPLP2P05387 115 aaKnown RBP8.59□□□□□ -1.03
RFX3-202ENST00000358730 HSPA8P11142 646 aaKnown RBP8.59□□□□□ -1.03
RFX3-202ENST00000358730 GFAPP14136 432 aa8.59□□□□□ -1.03
RFX3-202ENST00000358730 ZNF37AP17032 561 aaPredicted RBP8.59□□□□□ -1.03
RFX3-202ENST00000358730 APOFQ13790 326 aa8.59□□□□□ -1.03
RFX3-202ENST00000358730 IKBKEQ14164 716 aa8.59□□□□□ -1.03
RFX3-202ENST00000358730 ZNF235Q14590 738 aa8.59□□□□□ -1.03
RFX3-202ENST00000358730 OR4D1Q15615 310 aa8.59□□□□□ -1.03
RFX3-202ENST00000358730 MRNIPQ6NTE8 343 aa8.59□□□□□ -1.03
RFX3-202ENST00000358730 KLHDC10Q6PID8 442 aa8.59□□□□□ -1.03
RFX3-202ENST00000358730 HACD2Q6Y1H2 254 aa8.59□□□□□ -1.03
RFX3-202ENST00000358730 DHFR2Q86XF0 187 aa8.59□□□□□ -1.03
RFX3-202ENST00000358730 FUNDC1Q8IVP5 155 aa8.59□□□□□ -1.03
RFX3-202ENST00000358730 DDIASQ8IXT1 998 aa8.59□□□□□ -1.03
RFX3-202ENST00000358730 DCP1BQ8IZD4 617 aaKnown RBP8.59□□□□□ -1.03
RFX3-202ENST00000358730 CLYBLQ8N0X4 340 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms