RNA–Protein interactions for RNA: ENST00000358028.8

NIPAL3-203, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene NIPAL3, Length 1,757 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-203ENST00000358028 TEX28O15482 410 aa14.34□□□□□ -0.11
NIPAL3-203ENST00000358028 BUD23O43709 281 aaKnown RBP14.34□□□□□ -0.11
NIPAL3-203ENST00000358028 NPHS1O60500 1241 aa14.34□□□□□ -0.11
NIPAL3-203ENST00000358028 RAMP2O60895 175 aa14.34□□□□□ -0.11
NIPAL3-203ENST00000358028 CLASP2O75122 1294 aaKnown RBP14.34□□□□□ -0.11
NIPAL3-203ENST00000358028 PAPSS2O95340 614 aaPredicted RBP14.34□□□□□ -0.11
NIPAL3-203ENST00000358028 PIGNO95427 931 aa14.34□□□□□ -0.11
NIPAL3-203ENST00000358028 BAG2O95816 211 aa14.34□□□□□ -0.11
NIPAL3-203ENST00000358028 SP100P23497 879 aaPredicted RBP14.34□□□□□ -0.11
NIPAL3-203ENST00000358028 LTBRP36941 435 aa14.34□□□□□ -0.11
NIPAL3-203ENST00000358028 MAPKAPK2P49137 400 aa14.34□□□□□ -0.11
NIPAL3-203ENST00000358028 KCNQ1P51787 676 aa14.34□□□□□ -0.11
NIPAL3-203ENST00000358028 SLC12A2P55011 1212 aa14.34□□□□□ -0.11
NIPAL3-203ENST00000358028 TBL3Q12788 808 aaKnown RBP14.34□□□□□ -0.11
NIPAL3-203ENST00000358028 SMARCB1Q12824 385 aa14.34□□□□□ -0.11
NIPAL3-203ENST00000358028 MSLNQ13421 630 aaPredicted RBP14.34□□□□□ -0.11
NIPAL3-203ENST00000358028 POLD3Q15054 466 aaPredicted RBP14.34□□□□□ -0.11
NIPAL3-203ENST00000358028 AAK1Q2M2I8 961 aa14.34□□□□□ -0.11
NIPAL3-203ENST00000358028 PARP15Q460N3 678 aa14.34□□□□□ -0.11
NIPAL3-203ENST00000358028 IZUMO2Q6UXV1 221 aa14.34□□□□□ -0.11
NIPAL3-203ENST00000358028 RSPO2Q6UXX9 243 aaPredicted RBP14.34□□□□□ -0.11
NIPAL3-203ENST00000358028 CIR1Q86X95 450 aaPredicted RBP14.34□□□□□ -0.11
NIPAL3-203ENST00000358028 PGBD5Q8N414 524 aa14.34□□□□□ -0.11
NIPAL3-203ENST00000358028 EFHBQ8N7U6 833 aa14.34□□□□□ -0.11
NIPAL3-203ENST00000358028 RP9Q8TA86 221 aaKnown RBP14.34□□□□□ -0.11
NIPAL3-203ENST00000358028 UBE2ZQ9H832 354 aaPredicted RBP14.34□□□□□ -0.11
NIPAL3-203ENST00000358028 PDP2Q9P2J9 529 aa14.34□□□□□ -0.11
NIPAL3-203ENST00000358028 BCAP29Q9UHQ4 241 aa14.34□□□□□ -0.11
NIPAL3-203ENST00000358028 POMPQ9Y244 141 aa14.34□□□□□ -0.11
NIPAL3-203ENST00000358028 SSX2IPQ9Y2D8 614 aa14.34□□□□□ -0.11
NIPAL3-203ENST00000358028 HCFC2Q9Y5Z7 792 aa14.34□□□□□ -0.11
NIPAL3-203ENST00000358028 E9PBE3 544 aa14.33□□□□□ -0.12
NIPAL3-203ENST00000358028 TBC1D4O60343 1298 aa14.33□□□□□ -0.12
NIPAL3-203ENST00000358028 DLX3O60479 287 aa14.33□□□□□ -0.12
NIPAL3-203ENST00000358028 KLHL41O60662 606 aa14.33□□□□□ -0.12
NIPAL3-203ENST00000358028 ZDHHC11BP0C7U3 371 aa14.33□□□□□ -0.12
NIPAL3-203ENST00000358028 PIK3R1P27986 724 aa14.33□□□□□ -0.12
NIPAL3-203ENST00000358028 CCR10P46092 362 aa14.33□□□□□ -0.12
NIPAL3-203ENST00000358028 CLCN5P51795 746 aa14.33□□□□□ -0.12
NIPAL3-203ENST00000358028 EPHB1P54762 984 aa14.33□□□□□ -0.12
NIPAL3-203ENST00000358028 DNAJB13P59910 316 aa14.33□□□□□ -0.12
NIPAL3-203ENST00000358028 SERINC3Q13530 473 aa14.33□□□□□ -0.12
NIPAL3-203ENST00000358028 KCNC3Q14003 757 aa14.33□□□□□ -0.12
NIPAL3-203ENST00000358028 IHHQ14623 411 aa14.33□□□□□ -0.12
NIPAL3-203ENST00000358028 NADSYN1Q6IA69 706 aa14.33□□□□□ -0.12
NIPAL3-203ENST00000358028 CNSTQ6PJW8 725 aa14.33□□□□□ -0.12
NIPAL3-203ENST00000358028 ARRDC2Q8TBH0 407 aa14.33□□□□□ -0.12
NIPAL3-203ENST00000358028 AGR3Q8TD06 166 aa14.33□□□□□ -0.12
NIPAL3-203ENST00000358028 UCMAQ8WVF2 138 aa14.33□□□□□ -0.12
NIPAL3-203ENST00000358028 HLA-CQ95604 372 aa14.33□□□□□ -0.12
NIPAL3-203ENST00000358028 MOCOSQ96EN8 888 aa14.33□□□□□ -0.12
NIPAL3-203ENST00000358028 CDCA3Q99618 268 aaPredicted RBP14.33□□□□□ -0.12
NIPAL3-203ENST00000358028 OMDQ99983 421 aa14.33□□□□□ -0.12
NIPAL3-203ENST00000358028 EMILIN2Q9BXX0 1053 aa14.33□□□□□ -0.12
NIPAL3-203ENST00000358028 MRPL46Q9H2W6 279 aaKnown RBP14.33□□□□□ -0.12
NIPAL3-203ENST00000358028 ZNF385DQ9H6B1 395 aa14.33□□□□□ -0.12
NIPAL3-203ENST00000358028 ACSS2Q9NR19 701 aa14.33□□□□□ -0.12
NIPAL3-203ENST00000358028 SPATS2LQ9NUQ6 558 aaKnown RBP14.33□□□□□ -0.12
NIPAL3-203ENST00000358028 TTC24A2A3L6 582 aaPredicted RBP14.32□□□□□ -0.12
NIPAL3-203ENST00000358028 SLC38A8A6NNN8 435 aa14.32□□□□□ -0.12
NIPAL3-203ENST00000358028 AURKAO14965 403 aa14.32□□□□□ -0.12
NIPAL3-203ENST00000358028 GRID2O43424 1007 aa14.32□□□□□ -0.12
NIPAL3-203ENST00000358028 PEX1O43933 1283 aa14.32□□□□□ -0.12
NIPAL3-203ENST00000358028 TFEBP19484 476 aa14.32□□□□□ -0.12
NIPAL3-203ENST00000358028 TACR2P21452 398 aa14.32□□□□□ -0.12
NIPAL3-203ENST00000358028 KCNA5P22460 613 aa14.32□□□□□ -0.12
NIPAL3-203ENST00000358028 PPARGP37231 505 aaPredicted RBP14.32□□□□□ -0.12
NIPAL3-203ENST00000358028 ETFBP38117 255 aa14.32□□□□□ -0.12
NIPAL3-203ENST00000358028 LEPRP48357 1165 aaKnown RBP14.32□□□□□ -0.12
NIPAL3-203ENST00000358028 NAGLUP54802 743 aa14.32□□□□□ -0.12
NIPAL3-203ENST00000358028 YBEYP58557 167 aaPredicted RBP14.32□□□□□ -0.12
NIPAL3-203ENST00000358028 CDC16Q13042 620 aa14.32□□□□□ -0.12
NIPAL3-203ENST00000358028 MTA1Q13330 715 aa14.32□□□□□ -0.12
NIPAL3-203ENST00000358028 ADAM15Q13444 863 aa14.32□□□□□ -0.12
NIPAL3-203ENST00000358028 ARL13AQ5H913 290 aaPredicted RBP14.32□□□□□ -0.12
NIPAL3-203ENST00000358028 SIRPB2Q5JXA9 342 aa14.32□□□□□ -0.12
NIPAL3-203ENST00000358028 SH2D4BQ5SQS7 431 aa14.32□□□□□ -0.12
NIPAL3-203ENST00000358028 RBM20Q5T481 1227 aaKnown RBP14.32□□□□□ -0.12
NIPAL3-203ENST00000358028 OR52E8Q6IFG1 317 aa14.32□□□□□ -0.12
NIPAL3-203ENST00000358028 PIWIL4Q7Z3Z4 852 aaKnown RBP14.32□□□□□ -0.12
NIPAL3-203ENST00000358028 LSMEM2Q8N112 164 aa14.32□□□□□ -0.12
NIPAL3-203ENST00000358028 OR13J1Q8NGT2 312 aa14.32□□□□□ -0.12
NIPAL3-203ENST00000358028 GIPC2Q8TF65 315 aa14.32□□□□□ -0.12
NIPAL3-203ENST00000358028 C2orf15Q8WU43 125 aaKnown RBP14.32□□□□□ -0.12
NIPAL3-203ENST00000358028 HEXDCQ8WVB3 486 aa14.32□□□□□ -0.12
NIPAL3-203ENST00000358028 OR52B2Q96RD2 323 aa14.32□□□□□ -0.12
NIPAL3-203ENST00000358028 MRPL57Q9BQC6 102 aaKnown RBP14.32□□□□□ -0.12
NIPAL3-203ENST00000358028 CCSER2Q9H7U1 834 aa14.32□□□□□ -0.12
NIPAL3-203ENST00000358028 MAN1C1Q9NR34 630 aa14.32□□□□□ -0.12
NIPAL3-203ENST00000358028 IGSF5Q9NSI5 407 aa14.32□□□□□ -0.12
NIPAL3-203ENST00000358028 DLGAP2Q9P1A6 1054 aa14.32□□□□□ -0.12
NIPAL3-203ENST00000358028 UXTQ9UBK9 157 aaPredicted RBP14.32□□□□□ -0.12
NIPAL3-203ENST00000358028 CDYLQ9Y232 598 aa14.32□□□□□ -0.12
NIPAL3-203ENST00000358028 LOC285095A0A1B0GVY8 99 aa14.32□□□□□ -0.12
NIPAL3-203ENST00000358028 MROH6A6NGR9 719 aa14.32□□□□□ -0.12
NIPAL3-203ENST00000358028 TRPC5OSA6NMA1 111 aa14.32□□□□□ -0.12
NIPAL3-203ENST00000358028 H3BQ06 376 aaPredicted RBP14.32□□□□□ -0.12
NIPAL3-203ENST00000358028 TNFRSF10AO00220 468 aa14.32□□□□□ -0.12
NIPAL3-203ENST00000358028 CASQ2O14958 399 aaPredicted RBP14.32□□□□□ -0.12
NIPAL3-203ENST00000358028 ADAM12O43184 909 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms