RNA–Protein interactions for RNA: ENST00000357732.8

RTN4-204, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 2,390 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-204ENST00000357732 HIPK3Q9H422 1215 aa17.73■□□□□ 0.43
RTN4-204ENST00000357732 ABCC13Q9NSE7 274 aa17.73■□□□□ 0.43
RTN4-204ENST00000357732 TTC24A2A3L6 582 aaPredicted RBP17.73■□□□□ 0.43
RTN4-204ENST00000357732 TYW5A2RUC4 315 aaKnown RBP17.73■□□□□ 0.43
RTN4-204ENST00000357732 NME4O00746 187 aa17.73■□□□□ 0.43
RTN4-204ENST00000357732 TREHO43280 583 aa17.73■□□□□ 0.43
RTN4-204ENST00000357732 IMPDH2P12268 514 aa17.73■□□□□ 0.43
RTN4-204ENST00000357732 YWHAQP27348 245 aa17.73■□□□□ 0.43
RTN4-204ENST00000357732 RPL9P32969 192 aaKnown RBP17.73■□□□□ 0.43
RTN4-204ENST00000357732 MFSD10Q14728 455 aa17.73■□□□□ 0.43
RTN4-204ENST00000357732 ATP6AP1Q15904 470 aa17.73■□□□□ 0.43
RTN4-204ENST00000357732 LDLRAD1Q5T700 205 aa17.73■□□□□ 0.43
RTN4-204ENST00000357732 SPRED1Q7Z699 444 aa17.73■□□□□ 0.43
RTN4-204ENST00000357732 ZNF354CQ86Y25 554 aa17.73■□□□□ 0.43
RTN4-204ENST00000357732 NPLOC4Q8TAT6 608 aa17.73■□□□□ 0.43
RTN4-204ENST00000357732 ISOC1Q96CN7 298 aa17.73■□□□□ 0.43
RTN4-204ENST00000357732 IMP4Q96G21 291 aaKnown RBP17.73■□□□□ 0.43
RTN4-204ENST00000357732 CNDP2Q96KP4 475 aaKnown RBP17.73■□□□□ 0.43
RTN4-204ENST00000357732 SMOC2Q9H3U7 446 aa17.73■□□□□ 0.43
RTN4-204ENST00000357732 FAF1Q9UNN5 650 aaPredicted RBP17.73■□□□□ 0.43
RTN4-204ENST00000357732 SH3PXD2BA1X283 911 aa17.72■□□□□ 0.43
RTN4-204ENST00000357732 AURKAO14965 403 aa17.72■□□□□ 0.43
RTN4-204ENST00000357732 SNAP91O60641 907 aa17.72■□□□□ 0.43
RTN4-204ENST00000357732 PAGE1O75459 146 aa17.72■□□□□ 0.43
RTN4-204ENST00000357732 RASAL1O95294 804 aa17.72■□□□□ 0.43
RTN4-204ENST00000357732 ALDOCP09972 364 aaKnown RBP17.72■□□□□ 0.43
RTN4-204ENST00000357732 UMPSP11172 480 aa17.72■□□□□ 0.43
RTN4-204ENST00000357732 RENBPP51606 427 aa17.72■□□□□ 0.43
RTN4-204ENST00000357732 GRB14Q14449 540 aa17.72■□□□□ 0.43
RTN4-204ENST00000357732 KIF19Q2TAC6 998 aa17.72■□□□□ 0.43
RTN4-204ENST00000357732 UNC50Q53HI1 259 aa17.72■□□□□ 0.43
RTN4-204ENST00000357732 FAM171BQ6P995 826 aa17.72■□□□□ 0.43
RTN4-204ENST00000357732 RBM12BQ8IXT5 1001 aaKnown RBP17.72■□□□□ 0.43
RTN4-204ENST00000357732 CBR4Q8N4T8 237 aa17.72■□□□□ 0.43
RTN4-204ENST00000357732 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP17.72■□□□□ 0.43
RTN4-204ENST00000357732 OR9I1Q8NGQ6 314 aa17.72■□□□□ 0.43
RTN4-204ENST00000357732 RHEBL1Q8TAI7 183 aa17.72■□□□□ 0.43
RTN4-204ENST00000357732 MYLPFQ96A32 169 aa17.72■□□□□ 0.43
RTN4-204ENST00000357732 DOK1Q99704 481 aa17.72■□□□□ 0.43
RTN4-204ENST00000357732 ACBD6Q9BR61 282 aa17.72■□□□□ 0.43
RTN4-204ENST00000357732 AKTIPQ9H8T0 292 aa17.72■□□□□ 0.43
RTN4-204ENST00000357732 SDR39U1Q9NRG7 319 aaPredicted RBP17.72■□□□□ 0.43
RTN4-204ENST00000357732 SMOXQ9NWM0 555 aa17.72■□□□□ 0.43
RTN4-204ENST00000357732 MAP10Q9P2G4 905 aa17.72■□□□□ 0.43
RTN4-204ENST00000357732 MROH6A6NGR9 719 aa17.72■□□□□ 0.43
RTN4-204ENST00000357732 DLGAP1O14490 977 aa17.72■□□□□ 0.43
RTN4-204ENST00000357732 PAX3P23760 479 aa17.72■□□□□ 0.43
RTN4-204ENST00000357732 CHRNA4P43681 627 aa17.72■□□□□ 0.43
RTN4-204ENST00000357732 CCT8P50990 548 aa17.72■□□□□ 0.43
RTN4-204ENST00000357732 PLOD1Q02809 727 aaPredicted RBP17.72■□□□□ 0.43
RTN4-204ENST00000357732 TNK2Q07912 1038 aa17.72■□□□□ 0.43
RTN4-204ENST00000357732 LAYNQ6UX15 382 aa17.72■□□□□ 0.43
RTN4-204ENST00000357732 RETREG3Q86VR2 466 aa17.72■□□□□ 0.43
RTN4-204ENST00000357732 SLC15A3Q8IY34 581 aa17.72■□□□□ 0.43
RTN4-204ENST00000357732 TRPV3Q8NET8 790 aa17.72■□□□□ 0.43
RTN4-204ENST00000357732 OR13J1Q8NGT2 312 aa17.72■□□□□ 0.43
RTN4-204ENST00000357732 PNPT1Q8TCS8 783 aaKnown RBP17.72■□□□□ 0.43
RTN4-204ENST00000357732 ANKRD49Q8WVL7 239 aa17.72■□□□□ 0.43
RTN4-204ENST00000357732 SIK2Q9H0K1 926 aa17.72■□□□□ 0.43
RTN4-204ENST00000357732 TMEM45AQ9NWC5 275 aa17.72■□□□□ 0.43
RTN4-204ENST00000357732 HAS3O00219 553 aa17.71■□□□□ 0.43
RTN4-204ENST00000357732 THP07101 528 aa17.71■□□□□ 0.43
RTN4-204ENST00000357732 IDO1P14902 403 aa17.71■□□□□ 0.43
RTN4-204ENST00000357732 PLK1P53350 603 aa17.71■□□□□ 0.43
RTN4-204ENST00000357732 ZNF789Q5FWF6 425 aa17.71■□□□□ 0.43
RTN4-204ENST00000357732 KANK2Q63ZY3 851 aa17.71■□□□□ 0.43
RTN4-204ENST00000357732 CLEC6AQ6EIG7 209 aa17.71■□□□□ 0.43
RTN4-204ENST00000357732 ZNF280DQ6N043 979 aa17.71■□□□□ 0.43
RTN4-204ENST00000357732 PTRH1Q86Y79 214 aaKnown RBP17.71■□□□□ 0.43
RTN4-204ENST00000357732 LEMD2Q8NC56 503 aa17.71■□□□□ 0.43
RTN4-204ENST00000357732 ALG9Q9H6U8 611 aa17.71■□□□□ 0.43
RTN4-204ENST00000357732 TIMM13Q9Y5L4 95 aaPredicted RBP17.71■□□□□ 0.43
RTN4-204ENST00000357732 DNAJC15Q9Y5T4 150 aa17.71■□□□□ 0.43
RTN4-204ENST00000357732 ODC1P11926 461 aa17.71■□□□□ 0.42
RTN4-204ENST00000357732 SUOXP51687 545 aa17.71■□□□□ 0.42
RTN4-204ENST00000357732 KLHL35Q6PF15 583 aa17.71■□□□□ 0.42
RTN4-204ENST00000357732 EPHX4Q8IUS5 362 aa17.71■□□□□ 0.42
RTN4-204ENST00000357732 ZNF786Q8N393 782 aa17.71■□□□□ 0.42
RTN4-204ENST00000357732 PAPD5Q8NDF8 572 aaKnown RBP17.71■□□□□ 0.42
RTN4-204ENST00000357732 FCRL2Q96LA5 508 aaPredicted RBP17.71■□□□□ 0.42
RTN4-204ENST00000357732 PATJQ8NI35 1801 aa17.7■□□□□ 0.42
RTN4-204ENST00000357732 NYNRINQ9P2P1 1898 aaKnown RBP17.7■□□□□ 0.42
RTN4-204ENST00000357732 MEIS3P2A8K0S8 358 aa17.7■□□□□ 0.42
RTN4-204ENST00000357732 PLOD2O00469 737 aa17.7■□□□□ 0.42
RTN4-204ENST00000357732 NR5A2O00482 541 aa17.7■□□□□ 0.42
RTN4-204ENST00000357732 AZIN1O14977 448 aa17.7■□□□□ 0.42
RTN4-204ENST00000357732 S1PR4O95977 384 aa17.7■□□□□ 0.42
RTN4-204ENST00000357732 LBPP18428 481 aa17.7■□□□□ 0.42
RTN4-204ENST00000357732 FDXRP22570 491 aa17.7■□□□□ 0.42
RTN4-204ENST00000357732 MAPRE1Q15691 268 aaKnown RBP17.7■□□□□ 0.42
RTN4-204ENST00000357732 AASDHQ4L235 1098 aaPredicted RBP17.7■□□□□ 0.42
RTN4-204ENST00000357732 ARTNQ5T4W7 220 aa17.7■□□□□ 0.42
RTN4-204ENST00000357732 OGFOD2Q6N063 350 aa17.7■□□□□ 0.42
RTN4-204ENST00000357732 ABRAXAS1Q6UWZ7 409 aa17.7■□□□□ 0.42
RTN4-204ENST00000357732 CLVS1Q8IUQ0 354 aaPredicted RBP17.7■□□□□ 0.42
RTN4-204ENST00000357732 PHYKPLQ8IUZ5 450 aa17.7■□□□□ 0.42
RTN4-204ENST00000357732 C1orf74Q96LT6 269 aa17.7■□□□□ 0.42
RTN4-204ENST00000357732 TUBA1CQ9BQE3 449 aa17.7■□□□□ 0.42
RTN4-204ENST00000357732 TMEM9Q9P0T7 183 aa17.7■□□□□ 0.42
RTN4-204ENST00000357732 TLL2Q9Y6L7 1015 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms