RNA–Protein interactions for RNA: ENST00000356415.5

RAP1A-201, Transcript of RAP1A, member of RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAP1A, Length 1,586 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAP1A-201ENST00000356415 TRMT10CQ7L0Y3 403 aaKnown RBP13.2□□□□□ -0.3
RAP1A-201ENST00000356415 TMEM135Q86UB9 458 aa13.2□□□□□ -0.3
RAP1A-201ENST00000356415 CAVIN3Q969G5 261 aa13.2□□□□□ -0.3
RAP1A-201ENST00000356415 ZNF669Q96BR6 464 aaPredicted RBP13.2□□□□□ -0.3
RAP1A-201ENST00000356415 ZNF778Q96MU6 729 aa13.2□□□□□ -0.3
RAP1A-201ENST00000356415 TTC25Q96NG3 672 aa13.2□□□□□ -0.3
RAP1A-201ENST00000356415 WRAP53Q9BUR4 548 aaKnown RBP13.2□□□□□ -0.3
RAP1A-201ENST00000356415 CDC42EP4Q9H3Q1 356 aaKnown RBP13.2□□□□□ -0.3
RAP1A-201ENST00000356415 VPS37BQ9H9H4 285 aa13.2□□□□□ -0.3
RAP1A-201ENST00000356415 EBF1Q9UH73 591 aa13.2□□□□□ -0.3
RAP1A-201ENST00000356415 GGT7Q9UJ14 662 aa13.2□□□□□ -0.3
RAP1A-201ENST00000356415 TBC1D3DA0A087WVF3 549 aa13.19□□□□□ -0.3
RAP1A-201ENST00000356415 TBC1D3IA0A087WXS9 549 aa13.19□□□□□ -0.3
RAP1A-201ENST00000356415 TBC1D3EA0A087X179 549 aa13.19□□□□□ -0.3
RAP1A-201ENST00000356415 TBC1D3KA0A087X1G2 549 aa13.19□□□□□ -0.3
RAP1A-201ENST00000356415 TBC1D3FA6NER0 549 aaPredicted RBP13.19□□□□□ -0.3
RAP1A-201ENST00000356415 GOLGA8CPA6NN73 597 aa13.19□□□□□ -0.3
RAP1A-201ENST00000356415 TBC1D3LB9A6J9 549 aa13.19□□□□□ -0.3
RAP1A-201ENST00000356415 H0Y858 1186 aa13.19□□□□□ -0.3
RAP1A-201ENST00000356415 LAMTOR5O43504 91 aa13.19□□□□□ -0.3
RAP1A-201ENST00000356415 PLRG1O43660 514 aaKnown RBP13.19□□□□□ -0.3
RAP1A-201ENST00000356415 LZTS3O60299 673 aaPredicted RBP13.19□□□□□ -0.3
RAP1A-201ENST00000356415 TBC1D3HP0C7X1 549 aa13.19□□□□□ -0.3
RAP1A-201ENST00000356415 OXTRP30559 389 aa13.19□□□□□ -0.3
RAP1A-201ENST00000356415 SSTR1P30872 391 aa13.19□□□□□ -0.3
RAP1A-201ENST00000356415 PHBP35232 272 aa13.19□□□□□ -0.3
RAP1A-201ENST00000356415 HADHAP40939 763 aa13.19□□□□□ -0.3
RAP1A-201ENST00000356415 LIG3P49916 1009 aa13.19□□□□□ -0.3
RAP1A-201ENST00000356415 TAS2R38P59533 333 aa13.19□□□□□ -0.3
RAP1A-201ENST00000356415 TMPRSS15P98073 1019 aa13.19□□□□□ -0.3
RAP1A-201ENST00000356415 RALGDSQ12967 914 aa13.19□□□□□ -0.3
RAP1A-201ENST00000356415 PTPRCAPQ14761 206 aa13.19□□□□□ -0.3
RAP1A-201ENST00000356415 ACOX1Q15067 660 aa13.19□□□□□ -0.3
RAP1A-201ENST00000356415 CNGA3Q16281 694 aa13.19□□□□□ -0.3
RAP1A-201ENST00000356415 SPANXN3Q5MJ09 141 aa13.19□□□□□ -0.3
RAP1A-201ENST00000356415 TBC1D3GQ6DHY5 549 aa13.19□□□□□ -0.3
RAP1A-201ENST00000356415 TBC1D3CQ6IPX1 549 aa13.19□□□□□ -0.3
RAP1A-201ENST00000356415 ESRP1Q6NXG1 681 aaKnown RBP13.19□□□□□ -0.3
RAP1A-201ENST00000356415 UNC5AQ6ZN44 842 aa13.19□□□□□ -0.3
RAP1A-201ENST00000356415 RASSF3Q86WH2 238 aa13.19□□□□□ -0.3
RAP1A-201ENST00000356415 TBC1D3Q8IZP1 549 aaPredicted RBP13.19□□□□□ -0.3
RAP1A-201ENST00000356415 TTC30BQ8N4P2 665 aa13.19□□□□□ -0.3
RAP1A-201ENST00000356415 OR4K2Q8NGD2 314 aa13.19□□□□□ -0.3
RAP1A-201ENST00000356415 OR13C4Q8NGS5 318 aa13.19□□□□□ -0.3
RAP1A-201ENST00000356415 HNRNPLLQ8WVV9 542 aaKnown RBP13.19□□□□□ -0.3
RAP1A-201ENST00000356415 UBLCP1Q8WVY7 318 aaPredicted RBP13.19□□□□□ -0.3
RAP1A-201ENST00000356415 PEX13Q92968 403 aa13.19□□□□□ -0.3
RAP1A-201ENST00000356415 EID2BQ96D98 161 aa13.19□□□□□ -0.3
RAP1A-201ENST00000356415 WDR83Q9BRX9 315 aaKnown RBP13.19□□□□□ -0.3
RAP1A-201ENST00000356415 TRIM56Q9BRZ2 755 aaKnown RBP13.19□□□□□ -0.3
RAP1A-201ENST00000356415 TPSD1Q9BZJ3 242 aa13.19□□□□□ -0.3
RAP1A-201ENST00000356415 LRRC4CQ9HCJ2 640 aa13.19□□□□□ -0.3
RAP1A-201ENST00000356415 NINJ2Q9NZG7 142 aa13.19□□□□□ -0.3
RAP1A-201ENST00000356415 PKD2L2Q9NZM6 624 aa13.19□□□□□ -0.3
RAP1A-201ENST00000356415 IL17CQ9P0M4 197 aa13.19□□□□□ -0.3
RAP1A-201ENST00000356415 USP36Q9P275 1121 aaKnown RBP13.19□□□□□ -0.3
RAP1A-201ENST00000356415 SLC2A6Q9UGQ3 507 aa13.19□□□□□ -0.3
RAP1A-201ENST00000356415 RIMKLBQ9ULI2 386 aa13.19□□□□□ -0.3
RAP1A-201ENST00000356415 PRR23AA6NEV1 266 aa13.18□□□□□ -0.3
RAP1A-201ENST00000356415 SPINT1O43278 529 aa13.18□□□□□ -0.3
RAP1A-201ENST00000356415 MMP20O60882 483 aa13.18□□□□□ -0.3
RAP1A-201ENST00000356415 ACSL3O95573 720 aa13.18□□□□□ -0.3
RAP1A-201ENST00000356415 GSTA2P09210 222 aa13.18□□□□□ -0.3
RAP1A-201ENST00000356415 STC1P52823 247 aa13.18□□□□□ -0.3
RAP1A-201ENST00000356415 ADPRHP54922 357 aa13.18□□□□□ -0.3
RAP1A-201ENST00000356415 PRAMEP78395 509 aa13.18□□□□□ -0.3
RAP1A-201ENST00000356415 CRYMQ14894 314 aa13.18□□□□□ -0.3
RAP1A-201ENST00000356415 FBXL6Q8N531 539 aa13.18□□□□□ -0.3
RAP1A-201ENST00000356415 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.18□□□□□ -0.3
RAP1A-201ENST00000356415 FAM131CQ96AQ9 280 aa13.18□□□□□ -0.3
RAP1A-201ENST00000356415 DNAJC1Q96KC8 554 aaKnown RBP13.18□□□□□ -0.3
RAP1A-201ENST00000356415 TXLNGYQ9BZA5 131 aa13.18□□□□□ -0.3
RAP1A-201ENST00000356415 KDM4CQ9H3R0 1056 aa13.18□□□□□ -0.3
RAP1A-201ENST00000356415 EPHX3Q9H6B9 360 aa13.18□□□□□ -0.3
RAP1A-201ENST00000356415 SGK2Q9HBY8 427 aa13.18□□□□□ -0.3
RAP1A-201ENST00000356415 ARFGAP3Q9NP61 516 aa13.18□□□□□ -0.3
RAP1A-201ENST00000356415 PPANQ9NQ55 473 aaKnown RBP13.18□□□□□ -0.3
RAP1A-201ENST00000356415 TREX1Q9NSU2 369 aa13.18□□□□□ -0.3
RAP1A-201ENST00000356415 NLE1Q9NVX2 485 aaPredicted RBP13.18□□□□□ -0.3
RAP1A-201ENST00000356415 CYP8B1Q9UNU6 501 aa13.18□□□□□ -0.3
RAP1A-201ENST00000356415 FNDC3AQ9Y2H6 1198 aaKnown RBP13.18□□□□□ -0.3
RAP1A-201ENST00000356415 FAM169AQ9Y6X4 670 aa13.18□□□□□ -0.3
RAP1A-201ENST00000356415 MYO18AQ92614 2054 aaKnown RBP13.17□□□□□ -0.3
RAP1A-201ENST00000356415 LRRC72A6NJI9 287 aa13.17□□□□□ -0.3
RAP1A-201ENST00000356415 TNFRSF10AO00220 468 aa13.17□□□□□ -0.3
RAP1A-201ENST00000356415 PSMD11O00231 422 aa13.17□□□□□ -0.3
RAP1A-201ENST00000356415 WNT9AO14904 365 aa13.17□□□□□ -0.3
RAP1A-201ENST00000356415 AXIN1O15169 862 aa13.17□□□□□ -0.3
RAP1A-201ENST00000356415 RIPK2O43353 540 aa13.17□□□□□ -0.3
RAP1A-201ENST00000356415 SPAG6O75602 509 aa13.17□□□□□ -0.3
RAP1A-201ENST00000356415 RPP40O75818 363 aaKnown RBP13.17□□□□□ -0.3
RAP1A-201ENST00000356415 TM7SF2O76062 418 aa13.17□□□□□ -0.3
RAP1A-201ENST00000356415 VAPBO95292 243 aa13.17□□□□□ -0.3
RAP1A-201ENST00000356415 C1SP09871 688 aa13.17□□□□□ -0.3
RAP1A-201ENST00000356415 TSHRP16473 764 aa13.17□□□□□ -0.3
RAP1A-201ENST00000356415 ACSL1P33121 698 aa13.17□□□□□ -0.3
RAP1A-201ENST00000356415 SPINT3P49223 89 aa13.17□□□□□ -0.3
RAP1A-201ENST00000356415 ZNF140P52738 457 aaPredicted RBP13.17□□□□□ -0.3
RAP1A-201ENST00000356415 RPS21P63220 83 aaKnown RBP13.17□□□□□ -0.3
RAP1A-201ENST00000356415 ZDHHC20Q5W0Z9 365 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 400.9 ms