RNA–Protein interactions for RNA: ENST00000356162.5

CNOT4-202, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 5 BASIC

Gene CNOT4, Length 2,594 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-202ENST00000356162 NUMA1Q14980 2115 aa3.99□□□□□ -1.77
CNOT4-202ENST00000356162 ZNF106Q9H2Y7 1883 aaKnown RBP3.99□□□□□ -1.77
CNOT4-202ENST00000356162 ABCA7Q8IZY2 2146 aa3.99□□□□□ -1.77
CNOT4-202ENST00000356162 A0A1W2PR77 199 aa3.99□□□□□ -1.77
CNOT4-202ENST00000356162 CAPN8A6NHC0 703 aa3.99□□□□□ -1.77
CNOT4-202ENST00000356162 FAM47DPA6NHR8 397 aa3.99□□□□□ -1.77
CNOT4-202ENST00000356162 PRAMEF26H0Y7S4 382 aa3.99□□□□□ -1.77
CNOT4-202ENST00000356162 PSMD11O00231 422 aa3.99□□□□□ -1.77
CNOT4-202ENST00000356162 CES2O00748 559 aa3.99□□□□□ -1.77
CNOT4-202ENST00000356162 NEMP1O14524 444 aa3.99□□□□□ -1.77
CNOT4-202ENST00000356162 TOR1BO14657 336 aa3.99□□□□□ -1.77
CNOT4-202ENST00000356162 EFSO43281 561 aa3.99□□□□□ -1.77
CNOT4-202ENST00000356162 FZD6O60353 706 aa3.99□□□□□ -1.77
CNOT4-202ENST00000356162 MAGEC1O60732 1142 aa3.99□□□□□ -1.77
CNOT4-202ENST00000356162 OPHN1O60890 802 aa3.99□□□□□ -1.77
CNOT4-202ENST00000356162 GJB3O75712 270 aa3.99□□□□□ -1.77
CNOT4-202ENST00000356162 PCDH8O95206 1070 aa3.99□□□□□ -1.77
CNOT4-202ENST00000356162 SYPP08247 313 aa3.99□□□□□ -1.77
CNOT4-202ENST00000356162 MMP2P08253 660 aa3.99□□□□□ -1.77
CNOT4-202ENST00000356162 RBP3P10745 1247 aa3.99□□□□□ -1.77
CNOT4-202ENST00000356162 CD33P20138 364 aa3.99□□□□□ -1.77
CNOT4-202ENST00000356162 TGM1P22735 817 aa3.99□□□□□ -1.77
CNOT4-202ENST00000356162 RBL1P28749 1068 aa3.99□□□□□ -1.77
CNOT4-202ENST00000356162 CD86P42081 329 aa3.99□□□□□ -1.77
CNOT4-202ENST00000356162 GEMP55040 296 aa3.99□□□□□ -1.77
CNOT4-202ENST00000356162 PSMA6P60900 246 aaKnown RBP3.99□□□□□ -1.77
CNOT4-202ENST00000356162 ARHGAP8P85298 464 aa3.99□□□□□ -1.77
CNOT4-202ENST00000356162 OVGP1Q12889 678 aa3.99□□□□□ -1.77
CNOT4-202ENST00000356162 LLGL1Q15334 1064 aa3.99□□□□□ -1.77
CNOT4-202ENST00000356162 UGP2Q16851 508 aa3.99□□□□□ -1.77
CNOT4-202ENST00000356162 AASDHQ4L235 1098 aaPredicted RBP3.99□□□□□ -1.77
CNOT4-202ENST00000356162 TRIM61Q5EBN2 209 aa3.99□□□□□ -1.77
CNOT4-202ENST00000356162 DARS2Q6PI48 645 aaKnown RBP3.99□□□□□ -1.77
CNOT4-202ENST00000356162 IL27RAQ6UWB1 636 aa3.99□□□□□ -1.77
CNOT4-202ENST00000356162 ALYREFQ86V81 257 aaKnown RBP3.99□□□□□ -1.77
CNOT4-202ENST00000356162 ZC3H18Q86VM9 953 aaKnown RBP3.99□□□□□ -1.77
CNOT4-202ENST00000356162 IQCHQ86VS3 1027 aa3.99□□□□□ -1.77
CNOT4-202ENST00000356162 KLHDC8BQ8IXV7 354 aa3.99□□□□□ -1.77
CNOT4-202ENST00000356162 RAVER1Q8IY67 606 aaKnown RBP3.99□□□□□ -1.77
CNOT4-202ENST00000356162 ZNF567Q8N184 647 aa3.99□□□□□ -1.77
CNOT4-202ENST00000356162 RASGEF1CQ8N431 466 aa3.99□□□□□ -1.77
CNOT4-202ENST00000356162 OXR1Q8N573 874 aa3.99□□□□□ -1.77
CNOT4-202ENST00000356162 PAF1Q8N7H5 531 aa3.99□□□□□ -1.77
CNOT4-202ENST00000356162 CNTD1Q8N815 330 aa3.99□□□□□ -1.77
CNOT4-202ENST00000356162 SLC35B2Q8TB61 432 aa3.99□□□□□ -1.77
CNOT4-202ENST00000356162 NETO1Q8TDF5 533 aa3.99□□□□□ -1.77
CNOT4-202ENST00000356162 SKA1Q96BD8 255 aa3.99□□□□□ -1.77
CNOT4-202ENST00000356162 RTP4Q96DX8 246 aa3.99□□□□□ -1.77
CNOT4-202ENST00000356162 IMP4Q96G21 291 aaKnown RBP3.99□□□□□ -1.77
CNOT4-202ENST00000356162 NSMCE3Q96MG7 304 aa3.99□□□□□ -1.77
CNOT4-202ENST00000356162 SLC6A18Q96N87 628 aa3.99□□□□□ -1.77
CNOT4-202ENST00000356162 SPATA13Q96N96 652 aa3.99□□□□□ -1.77
CNOT4-202ENST00000356162 LENG8Q96PV6 779 aaPredicted RBP3.99□□□□□ -1.77
CNOT4-202ENST00000356162 FCRL5Q96RD9 977 aa3.99□□□□□ -1.77
CNOT4-202ENST00000356162 EDEM2Q9BV94 578 aa3.99□□□□□ -1.77
CNOT4-202ENST00000356162 MIR1-1HGQ9H1L0 117 aa3.99□□□□□ -1.77
CNOT4-202ENST00000356162 KCTD5Q9NXV2 234 aa3.99□□□□□ -1.77
CNOT4-202ENST00000356162 B4GALT6Q9UBX8 382 aa3.99□□□□□ -1.77
CNOT4-202ENST00000356162 RSPH14Q9UHP6 348 aa3.99□□□□□ -1.77
CNOT4-202ENST00000356162 GGT7Q9UJ14 662 aa3.99□□□□□ -1.77
CNOT4-202ENST00000356162 ZNF232Q9UNY5 417 aa3.99□□□□□ -1.77
CNOT4-202ENST00000356162 ITM2BQ9Y287 266 aa3.99□□□□□ -1.77
CNOT4-202ENST00000356162 LRP4O75096 1905 aa3.98□□□□□ -1.77
CNOT4-202ENST00000356162 TRPM6Q9BX84 2022 aa3.98□□□□□ -1.77
CNOT4-202ENST00000356162 GOLGA6CA6NDK9 693 aa3.98□□□□□ -1.77
CNOT4-202ENST00000356162 GOLGA6BA6NDN3 693 aa3.98□□□□□ -1.77
CNOT4-202ENST00000356162 A6NNZ2 444 aa3.98□□□□□ -1.77
CNOT4-202ENST00000356162 VILLO15195 856 aa3.98□□□□□ -1.77
CNOT4-202ENST00000356162 YKT6O15498 198 aa3.98□□□□□ -1.77
CNOT4-202ENST00000356162 KCNN4O15554 427 aa3.98□□□□□ -1.77
CNOT4-202ENST00000356162 LIASO43766 372 aa3.98□□□□□ -1.77
CNOT4-202ENST00000356162 TM7SF2O76062 418 aa3.98□□□□□ -1.77
CNOT4-202ENST00000356162 HEXIM1O94992 359 aaKnown RBP3.98□□□□□ -1.77
CNOT4-202ENST00000356162 NDST3O95803 873 aa3.98□□□□□ -1.77
CNOT4-202ENST00000356162 CER1O95813 267 aa3.98□□□□□ -1.77
CNOT4-202ENST00000356162 CFIP05156 583 aa3.98□□□□□ -1.77
CNOT4-202ENST00000356162 ELFN1P0C7U0 828 aa3.98□□□□□ -1.77
CNOT4-202ENST00000356162 GOLGA6DP0CG33 693 aa3.98□□□□□ -1.77
CNOT4-202ENST00000356162 EPXP11678 715 aa3.98□□□□□ -1.77
CNOT4-202ENST00000356162 C6P13671 934 aa3.98□□□□□ -1.77
CNOT4-202ENST00000356162 ZNF30P17039 623 aa3.98□□□□□ -1.77
CNOT4-202ENST00000356162 HOXB4P17483 251 aaPredicted RBP3.98□□□□□ -1.77
CNOT4-202ENST00000356162 NFKB1P19838 968 aa3.98□□□□□ -1.77
CNOT4-202ENST00000356162 TEAD1P28347 426 aa3.98□□□□□ -1.77
CNOT4-202ENST00000356162 CD38P28907 300 aa3.98□□□□□ -1.77
CNOT4-202ENST00000356162 CD68P34810 354 aaPredicted RBP3.98□□□□□ -1.77
CNOT4-202ENST00000356162 AFF3P51826 1226 aaKnown RBP3.98□□□□□ -1.77
CNOT4-202ENST00000356162 C21orf59P57076 290 aa3.98□□□□□ -1.77
CNOT4-202ENST00000356162 GRIK2Q13002 908 aa3.98□□□□□ -1.77
CNOT4-202ENST00000356162 MPP3Q13368 585 aa3.98□□□□□ -1.77
CNOT4-202ENST00000356162 FGL2Q14314 439 aa3.98□□□□□ -1.77
CNOT4-202ENST00000356162 SF3A2Q15428 464 aaKnown RBP3.98□□□□□ -1.77
CNOT4-202ENST00000356162 SIX1Q15475 284 aaPredicted RBP3.98□□□□□ -1.77
CNOT4-202ENST00000356162 OASLQ15646 514 aaKnown RBP3.98□□□□□ -1.77
CNOT4-202ENST00000356162 ZNF423Q2M1K9 1284 aa3.98□□□□□ -1.77
CNOT4-202ENST00000356162 ZNF569Q5MCW4 686 aa3.98□□□□□ -1.77
CNOT4-202ENST00000356162 SEL1L3Q68CR1 1132 aa3.98□□□□□ -1.77
CNOT4-202ENST00000356162 DRICH1Q6PGQ1 229 aaPredicted RBP3.98□□□□□ -1.77
CNOT4-202ENST00000356162 KDELC1Q6UW63 502 aa3.98□□□□□ -1.77
CNOT4-202ENST00000356162 GCNT7Q6ZNI0 430 aa3.98□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms