RNA–Protein interactions for RNA: ENST00000355155.5

VPS13B-201, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 1 (best) BASIC

Gene VPS13B, Length 2,822 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-201ENST00000355155 TECRLQ5HYJ1 363 aa17.22■□□□□ 0.35
VPS13B-201ENST00000355155 PTAR1Q7Z6K3 402 aaPredicted RBP17.22■□□□□ 0.35
VPS13B-201ENST00000355155 FITM2Q8N6M3 262 aa17.22■□□□□ 0.35
VPS13B-201ENST00000355155 KDM1BQ8NB78 822 aa17.22■□□□□ 0.35
VPS13B-201ENST00000355155 VN1R2Q8NFZ6 395 aa17.22■□□□□ 0.35
VPS13B-201ENST00000355155 OR4K2Q8NGD2 314 aa17.22■□□□□ 0.35
VPS13B-201ENST00000355155 PDCD6IPQ8WUM4 868 aaKnown RBP17.22■□□□□ 0.35
VPS13B-201ENST00000355155 SKA1Q96BD8 255 aa17.22■□□□□ 0.35
VPS13B-201ENST00000355155 C20orf27Q9GZN8 174 aa17.22■□□□□ 0.35
VPS13B-201ENST00000355155 ZNF358Q9NW07 568 aa17.22■□□□□ 0.35
VPS13B-201ENST00000355155 SLC25A13Q9UJS0 675 aa17.22■□□□□ 0.35
VPS13B-201ENST00000355155 DOCK6Q96HP0 2047 aa17.22■□□□□ 0.35
VPS13B-201ENST00000355155 DENND4AQ7Z401 1863 aa17.21■□□□□ 0.35
VPS13B-201ENST00000355155 SRPRAP08240 638 aaKnown RBP17.21■□□□□ 0.35
VPS13B-201ENST00000355155 RALBP11234 206 aa17.21■□□□□ 0.35
VPS13B-201ENST00000355155 TYRP14679 529 aa17.21■□□□□ 0.35
VPS13B-201ENST00000355155 PEX6Q13608 980 aa17.21■□□□□ 0.35
VPS13B-201ENST00000355155 ACAP2Q15057 778 aa17.21■□□□□ 0.35
VPS13B-201ENST00000355155 MYLK3Q32MK0 819 aa17.21■□□□□ 0.35
VPS13B-201ENST00000355155 ATXN7L2Q5T6C5 722 aaPredicted RBP17.21■□□□□ 0.35
VPS13B-201ENST00000355155 LIPMQ5VYY2 423 aa17.21■□□□□ 0.35
VPS13B-201ENST00000355155 TSNARE1Q96NA8 513 aa17.21■□□□□ 0.35
VPS13B-201ENST00000355155 MRPS23Q9Y3D9 190 aaKnown RBP17.21■□□□□ 0.35
VPS13B-201ENST00000355155 TRBV5-4A0A0C4DH59 114 aa17.21■□□□□ 0.35
VPS13B-201ENST00000355155 TRIM13O60858 407 aa17.21■□□□□ 0.35
VPS13B-201ENST00000355155 ASLP04424 464 aa17.21■□□□□ 0.35
VPS13B-201ENST00000355155 ABCE1P61221 599 aaKnown RBP17.21■□□□□ 0.35
VPS13B-201ENST00000355155 EML3Q32P44 896 aa17.21■□□□□ 0.35
VPS13B-201ENST00000355155 AARS2Q5JTZ9 985 aaKnown RBP17.21■□□□□ 0.35
VPS13B-201ENST00000355155 CRLF3Q8IUI8 442 aa17.21■□□□□ 0.35
VPS13B-201ENST00000355155 OR6P1Q8NGX9 317 aa17.21■□□□□ 0.35
VPS13B-201ENST00000355155 RFWD2Q8NHY2 731 aa17.21■□□□□ 0.35
VPS13B-201ENST00000355155 SREK1Q8WXA9 508 aaKnown RBP17.21■□□□□ 0.35
VPS13B-201ENST00000355155 SMG7Q92540 1137 aaKnown RBP17.21■□□□□ 0.35
VPS13B-201ENST00000355155 ATXN7L3BQ96GX2 97 aa17.21■□□□□ 0.35
VPS13B-201ENST00000355155 MRGPRX3Q96LB0 322 aa17.21■□□□□ 0.35
VPS13B-201ENST00000355155 BBS2Q9BXC9 721 aa17.21■□□□□ 0.35
VPS13B-201ENST00000355155 MRPL46Q9H2W6 279 aaKnown RBP17.21■□□□□ 0.35
VPS13B-201ENST00000355155 EPB41L3Q9Y2J2 1087 aaPredicted RBP17.21■□□□□ 0.35
VPS13B-201ENST00000355155 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.2■□□□□ 0.34
VPS13B-201ENST00000355155 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.2■□□□□ 0.34
VPS13B-201ENST00000355155 AGAP14A8MT82 685 aa17.2■□□□□ 0.34
VPS13B-201ENST00000355155 SCAMP3O14828 347 aaKnown RBP17.2■□□□□ 0.34
VPS13B-201ENST00000355155 LTA4HP09960 611 aaKnown RBP17.2■□□□□ 0.34
VPS13B-201ENST00000355155 ABCG1P45844 678 aa17.2■□□□□ 0.34
VPS13B-201ENST00000355155 SLC1A6P48664 564 aa17.2■□□□□ 0.34
VPS13B-201ENST00000355155 NFKB2Q00653 900 aa17.2■□□□□ 0.34
VPS13B-201ENST00000355155 ASPHQ12797 758 aa17.2■□□□□ 0.34
VPS13B-201ENST00000355155 HSF5Q4G112 596 aaPredicted RBP17.2■□□□□ 0.34
VPS13B-201ENST00000355155 CARD16Q5EG05 197 aa17.2■□□□□ 0.34
VPS13B-201ENST00000355155 FSTL5Q8N475 847 aaPredicted RBP17.2■□□□□ 0.34
VPS13B-201ENST00000355155 ITFG1Q8TB96 612 aa17.2■□□□□ 0.34
VPS13B-201ENST00000355155 KCTD4Q8WVF5 259 aa17.2■□□□□ 0.34
VPS13B-201ENST00000355155 POLR3BQ9NW08 1133 aaPredicted RBP17.2■□□□□ 0.34
VPS13B-201ENST00000355155 GDE1Q9NZC3 331 aa17.2■□□□□ 0.34
VPS13B-201ENST00000355155 RUVBL2Q9Y230 463 aaKnown RBP17.2■□□□□ 0.34
VPS13B-201ENST00000355155 PHGDHO43175 533 aaKnown RBP17.2■□□□□ 0.34
VPS13B-201ENST00000355155 NPHS1O60500 1241 aa17.2■□□□□ 0.34
VPS13B-201ENST00000355155 ATP5HO75947 161 aa17.2■□□□□ 0.34
VPS13B-201ENST00000355155 RBP1P09455 135 aa17.2■□□□□ 0.34
VPS13B-201ENST00000355155 RPS3P23396 243 aaKnown RBP eCLIP17.2■□□□□ 0.34
VPS13B-201ENST00000355155 SERPINA4P29622 427 aa17.2■□□□□ 0.34
VPS13B-201ENST00000355155 ECT2LQ008S8 904 aa17.2■□□□□ 0.34
VPS13B-201ENST00000355155 SPRED3Q2MJR0 410 aa17.2■□□□□ 0.34
VPS13B-201ENST00000355155 AGAP9Q5VTM2 703 aa17.2■□□□□ 0.34
VPS13B-201ENST00000355155 RAPH1Q70E73 1250 aa17.2■□□□□ 0.34
VPS13B-201ENST00000355155 TTC8Q8TAM2 541 aa17.2■□□□□ 0.34
VPS13B-201ENST00000355155 FRS2Q8WU20 508 aa17.2■□□□□ 0.34
VPS13B-201ENST00000355155 CCDC126Q96EE4 140 aa17.2■□□□□ 0.34
VPS13B-201ENST00000355155 PBX4Q9BYU1 374 aa17.2■□□□□ 0.34
VPS13B-201ENST00000355155 DRC3Q9H069 523 aa17.2■□□□□ 0.34
VPS13B-201ENST00000355155 TLE6Q9H808 572 aa17.2■□□□□ 0.34
VPS13B-201ENST00000355155 NPHS2Q9NP85 383 aa17.2■□□□□ 0.34
VPS13B-201ENST00000355155 SAR1AQ9NR31 198 aa17.2■□□□□ 0.34
VPS13B-201ENST00000355155 OR51F1A6NGY5 319 aa17.2■□□□□ 0.34
VPS13B-201ENST00000355155 PALM2-AKAP2B1ALY0 433 aaPredicted RBP17.2■□□□□ 0.34
VPS13B-201ENST00000355155 POP4O95707 220 aaKnown RBP17.2■□□□□ 0.34
VPS13B-201ENST00000355155 F7P08709 466 aaPredicted RBP17.2■□□□□ 0.34
VPS13B-201ENST00000355155 MYL2P10916 166 aa17.2■□□□□ 0.34
VPS13B-201ENST00000355155 SCTRP47872 440 aa17.2■□□□□ 0.34
VPS13B-201ENST00000355155 TTPAP49638 278 aa17.2■□□□□ 0.34
VPS13B-201ENST00000355155 CDKN2DP55273 166 aa17.2■□□□□ 0.34
VPS13B-201ENST00000355155 FAM83EQ2M2I3 478 aa17.2■□□□□ 0.34
VPS13B-201ENST00000355155 LY6G5CQ5SRR4 150 aa17.2■□□□□ 0.34
VPS13B-201ENST00000355155 LYPLAL1Q5VWZ2 237 aa17.2■□□□□ 0.34
VPS13B-201ENST00000355155 CERS6Q6ZMG9 384 aa17.2■□□□□ 0.34
VPS13B-201ENST00000355155 ETFBKMTQ8IXQ9 262 aa17.2■□□□□ 0.34
VPS13B-201ENST00000355155 RAVER1Q8IY67 606 aaKnown RBP17.2■□□□□ 0.34
VPS13B-201ENST00000355155 EID2BQ96D98 161 aa17.2■□□□□ 0.34
VPS13B-201ENST00000355155 LINC00597Q9H2U6 94 aa17.2■□□□□ 0.34
VPS13B-201ENST00000355155 DNAJC28Q9NX36 388 aa17.2■□□□□ 0.34
VPS13B-201ENST00000355155 EVLQ9UI08 416 aaPredicted RBP17.2■□□□□ 0.34
VPS13B-201ENST00000355155 MED16Q9Y2X0 877 aa17.2■□□□□ 0.34
VPS13B-201ENST00000355155 OAS3Q9Y6K5 1087 aaKnown RBP17.2■□□□□ 0.34
VPS13B-201ENST00000355155 GAPDHSO14556 408 aaPredicted RBP17.19■□□□□ 0.34
VPS13B-201ENST00000355155 ZNF195O14628 629 aa17.19■□□□□ 0.34
VPS13B-201ENST00000355155 PER2O15055 1255 aa17.19■□□□□ 0.34
VPS13B-201ENST00000355155 SLC8A1P32418 973 aa17.19■□□□□ 0.34
VPS13B-201ENST00000355155 CTSOP43234 321 aaPredicted RBP17.19■□□□□ 0.34
VPS13B-201ENST00000355155 SLC12A2P55011 1212 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms