RNA–Protein interactions for RNA: ENST00000353546.7

ARFGAP1-201, Transcript of ADP ribosylation factor GTPase activating protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene ARFGAP1, Length 2,776 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGAP1-201ENST00000353546 TFAP2DQ7Z6R9 452 aa16.91■□□□□ 0.3
ARFGAP1-201ENST00000353546 HACE1Q8IYU2 909 aa16.91■□□□□ 0.3
ARFGAP1-201ENST00000353546 PLD6Q8N2A8 252 aaKnown RBP16.91■□□□□ 0.3
ARFGAP1-201ENST00000353546 CADM2Q8N3J6 435 aa16.91■□□□□ 0.3
ARFGAP1-201ENST00000353546 TOP1MTQ969P6 601 aa16.91■□□□□ 0.3
ARFGAP1-201ENST00000353546 ZNF560Q96MR9 790 aa16.91■□□□□ 0.3
ARFGAP1-201ENST00000353546 PGLYRP2Q96PD5 576 aa16.91■□□□□ 0.3
ARFGAP1-201ENST00000353546 QKIQ96PU8 341 aaKnown RBP eCLIP16.91■□□□□ 0.3
ARFGAP1-201ENST00000353546 CD320Q9NPF0 282 aa16.91■□□□□ 0.3
ARFGAP1-201ENST00000353546 PLSCR3Q9NRY6 295 aa16.91■□□□□ 0.3
ARFGAP1-201ENST00000353546 PIM2Q9P1W9 311 aa16.91■□□□□ 0.3
ARFGAP1-201ENST00000353546 GPC4O75487 556 aa16.9■□□□□ 0.3
ARFGAP1-201ENST00000353546 ARNTP27540 789 aa16.9■□□□□ 0.3
ARFGAP1-201ENST00000353546 ALDH4A1P30038 563 aa16.9■□□□□ 0.3
ARFGAP1-201ENST00000353546 PIGFQ07326 219 aa16.9■□□□□ 0.3
ARFGAP1-201ENST00000353546 ACAP2Q15057 778 aa16.9■□□□□ 0.3
ARFGAP1-201ENST00000353546 ANO4Q32M45 955 aa16.9■□□□□ 0.3
ARFGAP1-201ENST00000353546 SLC10A6Q3KNW5 377 aa16.9■□□□□ 0.3
ARFGAP1-201ENST00000353546 BROXQ5VW32 411 aa16.9■□□□□ 0.3
ARFGAP1-201ENST00000353546 TMEM236Q5W0B7 351 aa16.9■□□□□ 0.3
ARFGAP1-201ENST00000353546 CES3Q6UWW8 571 aa16.9■□□□□ 0.3
ARFGAP1-201ENST00000353546 SLC51BQ86UW2 128 aa16.9■□□□□ 0.3
ARFGAP1-201ENST00000353546 ANKRD13AQ8IZ07 590 aa16.9■□□□□ 0.3
ARFGAP1-201ENST00000353546 CNTD1Q8N815 330 aa16.9■□□□□ 0.3
ARFGAP1-201ENST00000353546 HTR3CQ8WXA8 447 aa16.9■□□□□ 0.3
ARFGAP1-201ENST00000353546 CITED4Q96RK1 184 aa16.9■□□□□ 0.3
ARFGAP1-201ENST00000353546 LGMNQ99538 433 aa16.9■□□□□ 0.3
ARFGAP1-201ENST00000353546 GPR20Q99678 358 aa16.9■□□□□ 0.3
ARFGAP1-201ENST00000353546 CEP41Q9BYV8 373 aa16.9■□□□□ 0.3
ARFGAP1-201ENST00000353546 UNC93B1Q9H1C4 597 aa16.9■□□□□ 0.3
ARFGAP1-201ENST00000353546 SP140LQ9H930 580 aa16.9■□□□□ 0.3
ARFGAP1-201ENST00000353546 DTLQ9NZJ0 730 aa16.9■□□□□ 0.3
ARFGAP1-201ENST00000353546 PALM2-AKAP2B1ALY0 433 aaPredicted RBP16.9■□□□□ 0.3
ARFGAP1-201ENST00000353546 HCRTO43612 131 aa16.9■□□□□ 0.3
ARFGAP1-201ENST00000353546 LTFP02788 710 aa16.9■□□□□ 0.3
ARFGAP1-201ENST00000353546 ERVK-10P10266 1014 aa16.9■□□□□ 0.3
ARFGAP1-201ENST00000353546 PSMD8P48556 350 aa16.9■□□□□ 0.3
ARFGAP1-201ENST00000353546 ZNF280AP59817 542 aaPredicted RBP16.9■□□□□ 0.3
ARFGAP1-201ENST00000353546 MRPS15P82914 257 aaKnown RBP16.9■□□□□ 0.3
ARFGAP1-201ENST00000353546 C19orf57Q0VDD7 668 aa16.9■□□□□ 0.3
ARFGAP1-201ENST00000353546 TBCELQ5QJ74 424 aa16.9■□□□□ 0.3
ARFGAP1-201ENST00000353546 DESI1Q6ICB0 168 aa16.9■□□□□ 0.3
ARFGAP1-201ENST00000353546 LAYNQ6UX15 382 aa16.9■□□□□ 0.3
ARFGAP1-201ENST00000353546 ACOT1Q86TX2 421 aa16.9■□□□□ 0.3
ARFGAP1-201ENST00000353546 FBXO16Q8IX29 292 aaPredicted RBP16.9■□□□□ 0.3
ARFGAP1-201ENST00000353546 PNPT1Q8TCS8 783 aaKnown RBP16.9■□□□□ 0.3
ARFGAP1-201ENST00000353546 C2orf49Q9BVC5 232 aaPredicted RBP16.9■□□□□ 0.3
ARFGAP1-201ENST00000353546 CHID1Q9BWS9 393 aa16.9■□□□□ 0.3
ARFGAP1-201ENST00000353546 GGA3Q9NZ52 723 aa16.9■□□□□ 0.3
ARFGAP1-201ENST00000353546 ZNF112Q9UJU3 913 aa16.9■□□□□ 0.3
ARFGAP1-201ENST00000353546 DSEQ9UL01 958 aa16.9■□□□□ 0.3
ARFGAP1-201ENST00000353546 DOCK1Q14185 1865 aa16.9■□□□□ 0.3
ARFGAP1-201ENST00000353546 RAD51BO15315 384 aa16.89■□□□□ 0.3
ARFGAP1-201ENST00000353546 HDAC3O15379 428 aa16.89■□□□□ 0.3
ARFGAP1-201ENST00000353546 GRID2O43424 1007 aa16.89■□□□□ 0.3
ARFGAP1-201ENST00000353546 KRT6AP02538 564 aa16.89■□□□□ 0.3
ARFGAP1-201ENST00000353546 KRT6BP04259 564 aa16.89■□□□□ 0.3
ARFGAP1-201ENST00000353546 ARCN1P48444 511 aaKnown RBP16.89■□□□□ 0.3
ARFGAP1-201ENST00000353546 POLD2P49005 469 aa16.89■□□□□ 0.3
ARFGAP1-201ENST00000353546 NR2C2P49116 596 aa16.89■□□□□ 0.3
ARFGAP1-201ENST00000353546 TMEM132DQ14C87 1099 aa16.89■□□□□ 0.3
ARFGAP1-201ENST00000353546 CDK10Q15131 360 aa16.89■□□□□ 0.3
ARFGAP1-201ENST00000353546 DPYSL2Q16555 572 aa16.89■□□□□ 0.3
ARFGAP1-201ENST00000353546 GEN1Q17RS7 908 aa16.89■□□□□ 0.3
ARFGAP1-201ENST00000353546 SEL1L3Q68CR1 1132 aa16.89■□□□□ 0.3
ARFGAP1-201ENST00000353546 CMC1Q7Z7K0 106 aa16.89■□□□□ 0.3
ARFGAP1-201ENST00000353546 GATAD2AQ86YP4 633 aa16.89■□□□□ 0.3
ARFGAP1-201ENST00000353546 LYSMD2Q8IV50 215 aa16.89■□□□□ 0.3
ARFGAP1-201ENST00000353546 SFRP1Q8N474 314 aa16.89■□□□□ 0.3
ARFGAP1-201ENST00000353546 COLGALT1Q8NBJ5 622 aa16.89■□□□□ 0.3
ARFGAP1-201ENST00000353546 ARNTL2Q8WYA1 636 aa16.89■□□□□ 0.3
ARFGAP1-201ENST00000353546 ATXN7L3BQ96GX2 97 aa16.89■□□□□ 0.3
ARFGAP1-201ENST00000353546 CSPG4P5Q96PW8 444 aa16.89■□□□□ 0.3
ARFGAP1-201ENST00000353546 ZNF717Q9BY31 904 aaPredicted RBP16.89■□□□□ 0.3
ARFGAP1-201ENST00000353546 ITM2CQ9NQX7 267 aa16.89■□□□□ 0.3
ARFGAP1-201ENST00000353546 PDGFCQ9NRA1 345 aa16.89■□□□□ 0.3
ARFGAP1-201ENST00000353546 DDX28Q9NUL7 540 aaKnown RBP16.89■□□□□ 0.3
ARFGAP1-201ENST00000353546 GINS2Q9Y248 185 aa16.89■□□□□ 0.3
ARFGAP1-201ENST00000353546 hCG_2039718K7EN88 272 aa16.89■□□□□ 0.29
ARFGAP1-201ENST00000353546 RNF103O00237 685 aa16.89■□□□□ 0.29
ARFGAP1-201ENST00000353546 MAN1A2O60476 641 aa16.89■□□□□ 0.29
ARFGAP1-201ENST00000353546 ILF2Q12905 390 aaKnown RBP16.89■□□□□ 0.29
ARFGAP1-201ENST00000353546 TRAP1Q12931 704 aaKnown RBP16.89■□□□□ 0.29
ARFGAP1-201ENST00000353546 LAMC2Q13753 1193 aa16.89■□□□□ 0.29
ARFGAP1-201ENST00000353546 ATP6AP1Q15904 470 aa16.89■□□□□ 0.29
ARFGAP1-201ENST00000353546 AMHR2Q16671 573 aa16.89■□□□□ 0.29
ARFGAP1-201ENST00000353546 PPP1R3AQ16821 1122 aa16.89■□□□□ 0.29
ARFGAP1-201ENST00000353546 AASDHQ4L235 1098 aaPredicted RBP16.89■□□□□ 0.29
ARFGAP1-201ENST00000353546 GLRA4Q5JXX5 417 aa16.89■□□□□ 0.29
ARFGAP1-201ENST00000353546 LINC00523Q86TU6 105 aa16.89■□□□□ 0.29
ARFGAP1-201ENST00000353546 DHFR2Q86XF0 187 aa16.89■□□□□ 0.29
ARFGAP1-201ENST00000353546 CCDC28AQ8IWP9 274 aa16.89■□□□□ 0.29
ARFGAP1-201ENST00000353546 POC5Q8NA72 575 aa16.89■□□□□ 0.29
ARFGAP1-201ENST00000353546 OR6Q1Q8NGQ2 317 aa16.89■□□□□ 0.29
ARFGAP1-201ENST00000353546 NDNFQ8TB73 568 aa16.89■□□□□ 0.29
ARFGAP1-201ENST00000353546 CLEC4CQ8WTT0 213 aa16.89■□□□□ 0.29
ARFGAP1-201ENST00000353546 CAMKK2Q96RR4 588 aa16.89■□□□□ 0.29
ARFGAP1-201ENST00000353546 FBXO8Q9NRD0 319 aa16.89■□□□□ 0.29
ARFGAP1-201ENST00000353546 MTMR10Q9NXD2 777 aa16.89■□□□□ 0.29
ARFGAP1-201ENST00000353546 MORF4L1Q9UBU8 362 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms