RNA–Protein interactions for RNA: ENST00000350034.4

TRIM55-203, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,177 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-203ENST00000350034 PRR11Q96HE9 360 aaPredicted RBP6.93□□□□□ -1.3
TRIM55-203ENST00000350034 EXOC2Q96KP1 924 aa6.93□□□□□ -1.3
TRIM55-203ENST00000350034 TSNARE1Q96NA8 513 aa6.93□□□□□ -1.3
TRIM55-203ENST00000350034 GCNAQ96QF7 691 aa6.93□□□□□ -1.3
TRIM55-203ENST00000350034 TCF12Q99081 682 aa6.93□□□□□ -1.3
TRIM55-203ENST00000350034 NDNQ99608 321 aa6.93□□□□□ -1.3
TRIM55-203ENST00000350034 CORO1BQ9BR76 489 aa6.93□□□□□ -1.3
TRIM55-203ENST00000350034 AARSD1Q9BTE6 412 aaKnown RBP6.93□□□□□ -1.3
TRIM55-203ENST00000350034 C2orf49Q9BVC5 232 aaPredicted RBP6.93□□□□□ -1.3
TRIM55-203ENST00000350034 ADGRE3Q9BY15 652 aa6.93□□□□□ -1.3
TRIM55-203ENST00000350034 NMUR2Q9GZQ4 415 aa6.93□□□□□ -1.3
TRIM55-203ENST00000350034 DRC3Q9H069 523 aa6.93□□□□□ -1.3
TRIM55-203ENST00000350034 MRPL46Q9H2W6 279 aaKnown RBP6.93□□□□□ -1.3
TRIM55-203ENST00000350034 TASP1Q9H6P5 420 aa6.93□□□□□ -1.3
TRIM55-203ENST00000350034 SUDS3Q9H7L9 328 aaPredicted RBP6.93□□□□□ -1.3
TRIM55-203ENST00000350034 POPDC3Q9HBV1 291 aa6.93□□□□□ -1.3
TRIM55-203ENST00000350034 MAGEE1Q9HCI5 957 aa6.93□□□□□ -1.3
TRIM55-203ENST00000350034 TLR9Q9NR96 1032 aa6.93□□□□□ -1.3
TRIM55-203ENST00000350034 CATSPERZQ9NTU4 200 aa6.93□□□□□ -1.3
TRIM55-203ENST00000350034 ABCB8Q9NUT2 735 aa6.93□□□□□ -1.3
TRIM55-203ENST00000350034 ARL8BQ9NVJ2 186 aa6.93□□□□□ -1.3
TRIM55-203ENST00000350034 INTS10Q9NVR2 710 aaKnown RBP6.93□□□□□ -1.3
TRIM55-203ENST00000350034 PNPOQ9NVS9 261 aa6.93□□□□□ -1.3
TRIM55-203ENST00000350034 XPR1Q9UBH6 696 aa6.93□□□□□ -1.3
TRIM55-203ENST00000350034 PRKAG2Q9UGJ0 569 aa6.93□□□□□ -1.3
TRIM55-203ENST00000350034 VPS28Q9UK41 221 aa6.93□□□□□ -1.3
TRIM55-203ENST00000350034 RPL26L1Q9UNX3 145 aaKnown RBP6.93□□□□□ -1.3
TRIM55-203ENST00000350034 SORCS3Q9UPU3 1222 aa6.93□□□□□ -1.3
TRIM55-203ENST00000350034 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.93□□□□□ -1.3
TRIM55-203ENST00000350034 MED16Q9Y2X0 877 aa6.93□□□□□ -1.3
TRIM55-203ENST00000350034 FCF1Q9Y324 198 aaKnown RBP6.93□□□□□ -1.3
TRIM55-203ENST00000350034 PCDHGC4Q9Y5F7 938 aa6.93□□□□□ -1.3
TRIM55-203ENST00000350034 SLC4A7Q9Y6M7 1214 aa6.93□□□□□ -1.3
TRIM55-203ENST00000350034 MUC6Q6W4X9 2439 aa6.93□□□□□ -1.3
TRIM55-203ENST00000350034 MYLKQ15746 1914 aa6.92□□□□□ -1.3
TRIM55-203ENST00000350034 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP6.92□□□□□ -1.3
TRIM55-203ENST00000350034 C2orf81A6NN90 581 aa6.92□□□□□ -1.3
TRIM55-203ENST00000350034 H0YHG0 523 aa6.92□□□□□ -1.3
TRIM55-203ENST00000350034 K7ERQ8 282 aa6.92□□□□□ -1.3
TRIM55-203ENST00000350034 HGSO14964 777 aaPredicted RBP6.92□□□□□ -1.3
TRIM55-203ENST00000350034 BUD23O43709 281 aaKnown RBP6.92□□□□□ -1.3
TRIM55-203ENST00000350034 TLL1O43897 1013 aa6.92□□□□□ -1.3
TRIM55-203ENST00000350034 NPHS1O60500 1241 aa6.92□□□□□ -1.3
TRIM55-203ENST00000350034 CLASP2O75122 1294 aaKnown RBP6.92□□□□□ -1.3
TRIM55-203ENST00000350034 SOCS5O75159 536 aa6.92□□□□□ -1.3
TRIM55-203ENST00000350034 ARHGEF15O94989 841 aa6.92□□□□□ -1.3
TRIM55-203ENST00000350034 SNUPNO95149 360 aaKnown RBP6.92□□□□□ -1.3
TRIM55-203ENST00000350034 CBX6O95503 412 aa6.92□□□□□ -1.3
TRIM55-203ENST00000350034 RHOP08100 348 aa6.92□□□□□ -1.3
TRIM55-203ENST00000350034 RBP1P09455 135 aa6.92□□□□□ -1.3
TRIM55-203ENST00000350034 PTPN2P17706 415 aa6.92□□□□□ -1.3
TRIM55-203ENST00000350034 SAT1P21673 171 aa6.92□□□□□ -1.3
TRIM55-203ENST00000350034 ATP5F1P24539 256 aaPredicted RBP6.92□□□□□ -1.3
TRIM55-203ENST00000350034 TARSP26639 723 aaKnown RBP6.92□□□□□ -1.3
TRIM55-203ENST00000350034 SLC8A1P32418 973 aa6.92□□□□□ -1.3
TRIM55-203ENST00000350034 CD70P32970 193 aa6.92□□□□□ -1.3
TRIM55-203ENST00000350034 IRS1P35568 1242 aa6.92□□□□□ -1.3
TRIM55-203ENST00000350034 SERPINB5P36952 375 aa6.92□□□□□ -1.3
TRIM55-203ENST00000350034 MAPK8P45983 427 aa6.92□□□□□ -1.3
TRIM55-203ENST00000350034 GRIA4P48058 902 aa6.92□□□□□ -1.3
TRIM55-203ENST00000350034 IDH3AP50213 366 aa6.92□□□□□ -1.3
TRIM55-203ENST00000350034 SLC12A2P55011 1212 aa6.92□□□□□ -1.3
TRIM55-203ENST00000350034 XIAPP98170 497 aa6.92□□□□□ -1.3
TRIM55-203ENST00000350034 ASPHQ12797 758 aa6.92□□□□□ -1.3
TRIM55-203ENST00000350034 USP4Q13107 963 aa6.92□□□□□ -1.3
TRIM55-203ENST00000350034 RCN2Q14257 317 aa6.92□□□□□ -1.3
TRIM55-203ENST00000350034 ACAP2Q15057 778 aa6.92□□□□□ -1.3
TRIM55-203ENST00000350034 TEAD2Q15562 447 aa6.92□□□□□ -1.3
TRIM55-203ENST00000350034 CDKN3Q16667 212 aa6.92□□□□□ -1.3
TRIM55-203ENST00000350034 FAM83EQ2M2I3 478 aa6.92□□□□□ -1.3
TRIM55-203ENST00000350034 SETMARQ53H47 684 aaPredicted RBP6.92□□□□□ -1.3
TRIM55-203ENST00000350034 GPR158Q5T848 1215 aa6.92□□□□□ -1.3
TRIM55-203ENST00000350034 AGAP9Q5VTM2 703 aa6.92□□□□□ -1.3
TRIM55-203ENST00000350034 PLPP4Q5VZY2 271 aa6.92□□□□□ -1.3
TRIM55-203ENST00000350034 CYB5D1Q6P9G0 228 aa6.92□□□□□ -1.3
TRIM55-203ENST00000350034 EPGNQ6UW88 154 aa6.92□□□□□ -1.3
TRIM55-203ENST00000350034 GLT6D1Q7Z4J2 308 aa6.92□□□□□ -1.3
TRIM55-203ENST00000350034 SDCCAG8Q86SQ7 713 aaPredicted RBP6.92□□□□□ -1.3
TRIM55-203ENST00000350034 TBC1D1Q86TI0 1168 aaPredicted RBP6.92□□□□□ -1.3
TRIM55-203ENST00000350034 TTC7BQ86TV6 843 aa6.92□□□□□ -1.3
TRIM55-203ENST00000350034 ISCA2Q86U28 154 aa6.92□□□□□ -1.3
TRIM55-203ENST00000350034 CMTM8Q8IZV2 173 aa6.92□□□□□ -1.3
TRIM55-203ENST00000350034 LSMEM2Q8N112 164 aa6.92□□□□□ -1.3
TRIM55-203ENST00000350034 KIF2BQ8N4N8 673 aa6.92□□□□□ -1.3
TRIM55-203ENST00000350034 KIAA1958Q8N8K9 716 aa6.92□□□□□ -1.3
TRIM55-203ENST00000350034 PNPLA1Q8N8W4 532 aa6.92□□□□□ -1.3
TRIM55-203ENST00000350034 TXNDC5Q8NBS9 432 aaKnown RBP6.92□□□□□ -1.3
TRIM55-203ENST00000350034 OR4K2Q8NGD2 314 aa6.92□□□□□ -1.3
TRIM55-203ENST00000350034 TTC8Q8TAM2 541 aa6.92□□□□□ -1.3
TRIM55-203ENST00000350034 PPP4R1Q8TF05 950 aa6.92□□□□□ -1.3
TRIM55-203ENST00000350034 DDI1Q8WTU0 396 aa6.92□□□□□ -1.3
TRIM55-203ENST00000350034 ANKRD49Q8WVL7 239 aa6.92□□□□□ -1.3
TRIM55-203ENST00000350034 SREK1Q8WXA9 508 aaKnown RBP6.92□□□□□ -1.3
TRIM55-203ENST00000350034 LPGAT1Q92604 370 aa6.92□□□□□ -1.3
TRIM55-203ENST00000350034 UTP4Q969X6 686 aaKnown RBP6.92□□□□□ -1.3
TRIM55-203ENST00000350034 ISG20Q96AZ6 181 aaKnown RBP6.92□□□□□ -1.3
TRIM55-203ENST00000350034 RMDN1Q96DB5 314 aa6.92□□□□□ -1.3
TRIM55-203ENST00000350034 TCEAL4Q96EI5 215 aa6.92□□□□□ -1.3
TRIM55-203ENST00000350034 NSL1Q96IY1 281 aa6.92□□□□□ -1.3
TRIM55-203ENST00000350034 SCYL1Q96KG9 808 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms