RNA–Protein interactions for RNA: ENST00000348749.9

CHRNA1-202, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNA1, Length 1,984 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-202ENST00000348749 TMEM233B4DJY2 109 aa10.34□□□□□ -0.75
CHRNA1-202ENST00000348749 IQCJ-SCHIP1C9J366 451 aaPredicted RBP10.34□□□□□ -0.75
CHRNA1-202ENST00000348749 H0Y858 1186 aa10.34□□□□□ -0.75
CHRNA1-202ENST00000348749 AURKAO14965 403 aa10.34□□□□□ -0.75
CHRNA1-202ENST00000348749 ASNA1O43681 348 aa10.34□□□□□ -0.75
CHRNA1-202ENST00000348749 DYRK3O43781 588 aa10.34□□□□□ -0.75
CHRNA1-202ENST00000348749 HTR1BP28222 390 aa10.34□□□□□ -0.75
CHRNA1-202ENST00000348749 OXTRP30559 389 aa10.34□□□□□ -0.75
CHRNA1-202ENST00000348749 SERPINB10P48595 397 aa10.34□□□□□ -0.75
CHRNA1-202ENST00000348749 DNAJB13P59910 316 aa10.34□□□□□ -0.75
CHRNA1-202ENST00000348749 PAFAH1B3Q15102 231 aaKnown RBP10.34□□□□□ -0.75
CHRNA1-202ENST00000348749 ZNF484Q5JVG2 852 aa10.34□□□□□ -0.75
CHRNA1-202ENST00000348749 PPP1R26Q5T8A7 1209 aaPredicted RBP10.34□□□□□ -0.75
CHRNA1-202ENST00000348749 BTBD8Q5XKL5 378 aa10.34□□□□□ -0.75
CHRNA1-202ENST00000348749 CES3Q6UWW8 571 aa10.34□□□□□ -0.75
CHRNA1-202ENST00000348749 LBX2Q6XYB7 198 aa10.34□□□□□ -0.75
CHRNA1-202ENST00000348749 PDZD4Q76G19 769 aaPredicted RBP10.34□□□□□ -0.75
CHRNA1-202ENST00000348749 TMEM192Q8IY95 271 aa10.34□□□□□ -0.75
CHRNA1-202ENST00000348749 TBC1D21Q8IYX1 336 aa10.34□□□□□ -0.75
CHRNA1-202ENST00000348749 FSTL5Q8N475 847 aaPredicted RBP10.34□□□□□ -0.75
CHRNA1-202ENST00000348749 AFAP1L2Q8N4X5 818 aa10.34□□□□□ -0.75
CHRNA1-202ENST00000348749 MINDY1Q8N5J2 469 aa10.34□□□□□ -0.75
CHRNA1-202ENST00000348749 OR6Q1Q8NGQ2 317 aa10.34□□□□□ -0.75
CHRNA1-202ENST00000348749 MAGEE2Q8TD90 523 aaPredicted RBP10.34□□□□□ -0.75
CHRNA1-202ENST00000348749 PHF10Q8WUB8 498 aaKnown RBP10.34□□□□□ -0.75
CHRNA1-202ENST00000348749 BHMTQ93088 406 aa10.34□□□□□ -0.75
CHRNA1-202ENST00000348749 TBRG4Q969Z0 631 aaKnown RBP eCLIP10.34□□□□□ -0.75
CHRNA1-202ENST00000348749 TP53INP1Q96A56 240 aa10.34□□□□□ -0.75
CHRNA1-202ENST00000348749 MFSD3Q96ES6 412 aa10.34□□□□□ -0.75
CHRNA1-202ENST00000348749 SCYL1Q96KG9 808 aa10.34□□□□□ -0.75
CHRNA1-202ENST00000348749 HSFY1Q96LI6 401 aa10.34□□□□□ -0.75
CHRNA1-202ENST00000348749 AGAP2Q99490 1192 aa10.34□□□□□ -0.75
CHRNA1-202ENST00000348749 PLEKHA5Q9HAU0 1116 aa10.34□□□□□ -0.75
CHRNA1-202ENST00000348749 HPS4Q9NQG7 708 aa10.34□□□□□ -0.75
CHRNA1-202ENST00000348749 TLR9Q9NR96 1032 aa10.34□□□□□ -0.75
CHRNA1-202ENST00000348749 PIH1D1Q9NWS0 290 aaKnown RBP10.34□□□□□ -0.75
CHRNA1-202ENST00000348749 BFARQ9NZS9 450 aa10.34□□□□□ -0.75
CHRNA1-202ENST00000348749 GMPR2Q9P2T1 348 aaKnown RBP10.34□□□□□ -0.75
CHRNA1-202ENST00000348749 WDR90Q96KV7 1748 aa10.34□□□□□ -0.75
CHRNA1-202ENST00000348749 SOWAHBA6NEL2 793 aa10.34□□□□□ -0.75
CHRNA1-202ENST00000348749 UNCXA6NJT0 531 aa10.34□□□□□ -0.75
CHRNA1-202ENST00000348749 NCAM2O15394 837 aa10.34□□□□□ -0.75
CHRNA1-202ENST00000348749 MTSS1O43312 755 aa10.34□□□□□ -0.75
CHRNA1-202ENST00000348749 B4GAT1O43505 415 aa10.34□□□□□ -0.75
CHRNA1-202ENST00000348749 TPST1O60507 370 aa10.34□□□□□ -0.75
CHRNA1-202ENST00000348749 GABARAPO95166 117 aa10.34□□□□□ -0.75
CHRNA1-202ENST00000348749 ENO2P09104 434 aaPredicted RBP10.34□□□□□ -0.75
CHRNA1-202ENST00000348749 UMPSP11172 480 aa10.34□□□□□ -0.75
CHRNA1-202ENST00000348749 ITIH1P19827 911 aa10.34□□□□□ -0.75
CHRNA1-202ENST00000348749 CXCR2P25025 360 aa10.34□□□□□ -0.75
CHRNA1-202ENST00000348749 SHMT2P34897 504 aa10.34□□□□□ -0.75
CHRNA1-202ENST00000348749 KRT6CP48668 564 aa10.34□□□□□ -0.75
CHRNA1-202ENST00000348749 NPY2RP49146 381 aa10.34□□□□□ -0.75
CHRNA1-202ENST00000348749 RGS7P49802 495 aa10.34□□□□□ -0.75
CHRNA1-202ENST00000348749 BCAT1P54687 386 aa10.34□□□□□ -0.75
CHRNA1-202ENST00000348749 AIF1P55008 147 aa10.34□□□□□ -0.75
CHRNA1-202ENST00000348749 GJA9P57773 515 aa10.34□□□□□ -0.75
CHRNA1-202ENST00000348749 ECT2LQ008S8 904 aa10.34□□□□□ -0.75
CHRNA1-202ENST00000348749 CHRNEQ04844 493 aa10.34□□□□□ -0.75
CHRNA1-202ENST00000348749 BST2Q10589 180 aaKnown RBP10.34□□□□□ -0.75
CHRNA1-202ENST00000348749 IFRD2Q12894 506 aaPredicted RBP10.34□□□□□ -0.75
CHRNA1-202ENST00000348749 SELPLGQ14242 412 aa10.34□□□□□ -0.75
CHRNA1-202ENST00000348749 SMAD1Q15797 465 aaKnown RBP10.34□□□□□ -0.75
CHRNA1-202ENST00000348749 AMHR2Q16671 573 aa10.34□□□□□ -0.75
CHRNA1-202ENST00000348749 HIST2H2ACQ16777 129 aaPredicted RBP10.34□□□□□ -0.75
CHRNA1-202ENST00000348749 DGUOKQ16854 277 aa10.34□□□□□ -0.75
CHRNA1-202ENST00000348749 TSTD2Q5T7W7 516 aa10.34□□□□□ -0.75
CHRNA1-202ENST00000348749 NBPF12Q5TAG4 269 aaPredicted RBP10.34□□□□□ -0.75
CHRNA1-202ENST00000348749 EFCAB12Q6NXP0 572 aa10.34□□□□□ -0.75
CHRNA1-202ENST00000348749 LAYNQ6UX15 382 aa10.34□□□□□ -0.75
CHRNA1-202ENST00000348749 PIGZQ86VD9 579 aa10.34□□□□□ -0.75
CHRNA1-202ENST00000348749 SNX29P2Q8IUI4 249 aa10.34□□□□□ -0.75
CHRNA1-202ENST00000348749 LRRC52Q8N7C0 313 aa10.34□□□□□ -0.75
CHRNA1-202ENST00000348749 P2RY11Q96G91 374 aa10.34□□□□□ -0.75
CHRNA1-202ENST00000348749 MUS81Q96NY9 551 aa10.34□□□□□ -0.75
CHRNA1-202ENST00000348749 OR2B2Q9GZK3 357 aa10.34□□□□□ -0.75
CHRNA1-202ENST00000348749 NEK6Q9HC98 313 aa10.34□□□□□ -0.75
CHRNA1-202ENST00000348749 NECTIN3Q9NQS3 549 aa10.34□□□□□ -0.75
CHRNA1-202ENST00000348749 QPCTLQ9NXS2 382 aa10.34□□□□□ -0.75
CHRNA1-202ENST00000348749 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP10.34□□□□□ -0.75
CHRNA1-202ENST00000348749 WARS2Q9UGM6 360 aaKnown RBP10.34□□□□□ -0.75
CHRNA1-202ENST00000348749 ZNF229Q9UJW7 825 aa10.34□□□□□ -0.75
CHRNA1-202ENST00000348749 FZD10Q9ULW2 581 aa10.34□□□□□ -0.75
CHRNA1-202ENST00000348749 RUVBL2Q9Y230 463 aaKnown RBP10.34□□□□□ -0.75
CHRNA1-202ENST00000348749 TRIP11Q15643 1979 aa10.33□□□□□ -0.76
CHRNA1-202ENST00000348749 TCRBV5S2A0A599 114 aa10.33□□□□□ -0.76
CHRNA1-202ENST00000348749 ARPC2O15144 300 aa10.33□□□□□ -0.76
CHRNA1-202ENST00000348749 RFPL2O75678 378 aa10.33□□□□□ -0.76
CHRNA1-202ENST00000348749 AP2A1O95782 977 aa10.33□□□□□ -0.76
CHRNA1-202ENST00000348749 MZF1P28698 734 aaPredicted RBP10.33□□□□□ -0.76
CHRNA1-202ENST00000348749 CD40LGP29965 261 aa10.33□□□□□ -0.76
CHRNA1-202ENST00000348749 GRK3P35626 688 aa10.33□□□□□ -0.76
CHRNA1-202ENST00000348749 POLD3Q15054 466 aaPredicted RBP10.33□□□□□ -0.76
CHRNA1-202ENST00000348749 PITRM1Q5JRX3 1037 aa10.33□□□□□ -0.76
CHRNA1-202ENST00000348749 INTS6LQ5JSJ4 861 aaKnown RBP10.33□□□□□ -0.76
CHRNA1-202ENST00000348749 BSPRYQ5W0U4 402 aa10.33□□□□□ -0.76
CHRNA1-202ENST00000348749 CNSTQ6PJW8 725 aa10.33□□□□□ -0.76
CHRNA1-202ENST00000348749 DPH6Q7L8W6 267 aa10.33□□□□□ -0.76
CHRNA1-202ENST00000348749 THAP5Q7Z6K1 395 aa10.33□□□□□ -0.76
CHRNA1-202ENST00000348749 C11orf74Q86VG3 221 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms