RNA–Protein interactions for RNA: ENST00000348225.6

PTN-201, Transcript of pleiotrophin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTN, Length 1,614 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTN-201ENST00000348225 PFDN6O15212 129 aa18.68■□□□□ 0.58
PTN-201ENST00000348225 HAUS5O94927 633 aa18.68■□□□□ 0.58
PTN-201ENST00000348225 UGT2B4P06133 528 aa18.68■□□□□ 0.58
PTN-201ENST00000348225 DHRS4L1P0CG22 281 aa18.68■□□□□ 0.58
PTN-201ENST00000348225 POU3F3P20264 500 aaPredicted RBP18.68■□□□□ 0.58
PTN-201ENST00000348225 HMGCLP35914 325 aa18.68■□□□□ 0.58
PTN-201ENST00000348225 SLC12A2P55011 1212 aa18.68■□□□□ 0.58
PTN-201ENST00000348225 POLR2LP62875 67 aaKnown RBP18.68■□□□□ 0.58
PTN-201ENST00000348225 POU4F1Q01851 419 aa18.68■□□□□ 0.58
PTN-201ENST00000348225 KDSRQ06136 332 aa18.68■□□□□ 0.58
PTN-201ENST00000348225 PREPLQ4J6C6 727 aaPredicted RBP18.68■□□□□ 0.58
PTN-201ENST00000348225 GDPD4Q6W3E5 623 aa18.68■□□□□ 0.58
PTN-201ENST00000348225 RAPH1Q70E73 1250 aa18.68■□□□□ 0.58
PTN-201ENST00000348225 ZNF771Q7L3S4 317 aaPredicted RBP18.68■□□□□ 0.58
PTN-201ENST00000348225 LYSMD3Q7Z3D4 306 aa18.68■□□□□ 0.58
PTN-201ENST00000348225 CPLX4Q7Z7G2 160 aa18.68■□□□□ 0.58
PTN-201ENST00000348225 LCA5Q86VQ0 697 aa18.68■□□□□ 0.58
PTN-201ENST00000348225 GPATCH11Q8N954 259 aa18.68■□□□□ 0.58
PTN-201ENST00000348225 CHST14Q8NCH0 376 aa18.68■□□□□ 0.58
PTN-201ENST00000348225 LRRC8CQ8TDW0 803 aa18.68■□□□□ 0.58
PTN-201ENST00000348225 MYLIPQ8WY64 445 aa18.68■□□□□ 0.58
PTN-201ENST00000348225 LRIG1Q96JA1 1093 aa18.68■□□□□ 0.58
PTN-201ENST00000348225 ELMO2Q96JJ3 720 aa18.68■□□□□ 0.58
PTN-201ENST00000348225 MSLNLQ96KJ4 702 aa18.68■□□□□ 0.58
PTN-201ENST00000348225 TSNARE1Q96NA8 513 aa18.68■□□□□ 0.58
PTN-201ENST00000348225 LYSMD1Q96S90 227 aa18.68■□□□□ 0.58
PTN-201ENST00000348225 OSBPL1AQ9BXW6 950 aa18.68■□□□□ 0.58
PTN-201ENST00000348225 PLA2G2FQ9BZM2 168 aa18.68■□□□□ 0.58
PTN-201ENST00000348225 FAM107BQ9H098 131 aa18.68■□□□□ 0.58
PTN-201ENST00000348225 RABEP2Q9H5N1 569 aa18.68■□□□□ 0.58
PTN-201ENST00000348225 CAB39LQ9H9S4 337 aa18.68■□□□□ 0.58
PTN-201ENST00000348225 ZFYVE1Q9HBF4 777 aa18.68■□□□□ 0.58
PTN-201ENST00000348225 INTS10Q9NVR2 710 aaKnown RBP18.68■□□□□ 0.58
PTN-201ENST00000348225 MARCH4Q9P2E8 410 aaPredicted RBP18.68■□□□□ 0.58
PTN-201ENST00000348225 PRRC2BQ5JSZ5 2229 aaKnown RBP18.68■□□□□ 0.58
PTN-201ENST00000348225 TNRC18O15417 2968 aaPredicted RBP18.68■□□□□ 0.58
PTN-201ENST00000348225 STMN1P16949 149 aa18.67■□□□□ 0.58
PTN-201ENST00000348225 SAT1P21673 171 aa18.67■□□□□ 0.58
PTN-201ENST00000348225 CRABP2P29373 138 aa18.67■□□□□ 0.58
PTN-201ENST00000348225 PMLP29590 882 aa18.67■□□□□ 0.58
PTN-201ENST00000348225 HNF1BP35680 557 aa18.67■□□□□ 0.58
PTN-201ENST00000348225 EIF2DP41214 584 aaKnown RBP18.67■□□□□ 0.58
PTN-201ENST00000348225 COL19A1Q14993 1142 aa18.67■□□□□ 0.58
PTN-201ENST00000348225 BRAT1Q6PJG6 821 aa18.67■□□□□ 0.58
PTN-201ENST00000348225 CNSTQ6PJW8 725 aa18.67■□□□□ 0.58
PTN-201ENST00000348225 PARM1Q6UWI2 310 aa18.67■□□□□ 0.58
PTN-201ENST00000348225 RGS9BPQ6ZS82 235 aa18.67■□□□□ 0.58
PTN-201ENST00000348225 SLC41A1Q8IVJ1 513 aa18.67■□□□□ 0.58
PTN-201ENST00000348225 TERB1Q8NA31 727 aa18.67■□□□□ 0.58
PTN-201ENST00000348225 UCMAQ8WVF2 138 aa18.67■□□□□ 0.58
PTN-201ENST00000348225 TSPAN17Q96FV3 270 aa18.67■□□□□ 0.58
PTN-201ENST00000348225 TCF12Q99081 682 aa18.67■□□□□ 0.58
PTN-201ENST00000348225 C12orf65Q9H3J6 166 aaKnown RBP18.67■□□□□ 0.58
PTN-201ENST00000348225 IL17CQ9P0M4 197 aa18.67■□□□□ 0.58
PTN-201ENST00000348225 FKBPLQ9UIM3 349 aa18.67■□□□□ 0.58
PTN-201ENST00000348225 VPS9D1Q9Y2B5 631 aa18.67■□□□□ 0.58
PTN-201ENST00000348225 PPIL1Q9Y3C6 166 aa18.67■□□□□ 0.58
PTN-201ENST00000348225 C1orf232A0A0U1RR37 186 aa18.67■□□□□ 0.58
PTN-201ENST00000348225 S1PR4O95977 384 aa18.67■□□□□ 0.58
PTN-201ENST00000348225 C2P06681 752 aa18.67■□□□□ 0.58
PTN-201ENST00000348225 DRD4P21917 467 aa18.67■□□□□ 0.58
PTN-201ENST00000348225 NFKBIAP25963 317 aa18.67■□□□□ 0.58
PTN-201ENST00000348225 GDI1P31150 447 aa18.67■□□□□ 0.58
PTN-201ENST00000348225 MC4RP32245 332 aa18.67■□□□□ 0.58
PTN-201ENST00000348225 GJA4P35212 333 aa18.67■□□□□ 0.58
PTN-201ENST00000348225 LTBRP36941 435 aa18.67■□□□□ 0.58
PTN-201ENST00000348225 SERPINB4P48594 390 aa18.67■□□□□ 0.58
PTN-201ENST00000348225 STC1P52823 247 aa18.67■□□□□ 0.58
PTN-201ENST00000348225 RAB10P61026 200 aa18.67■□□□□ 0.58
PTN-201ENST00000348225 GRIN2CQ14957 1233 aa18.67■□□□□ 0.58
PTN-201ENST00000348225 TYSND1Q2T9J0 566 aa18.67■□□□□ 0.58
PTN-201ENST00000348225 PPM1JQ5JR12 505 aa18.67■□□□□ 0.58
PTN-201ENST00000348225 AARS2Q5JTZ9 985 aaKnown RBP18.67■□□□□ 0.58
PTN-201ENST00000348225 ZSWIM9Q86XI8 627 aa18.67■□□□□ 0.58
PTN-201ENST00000348225 LRRC34Q8IZ02 419 aa18.67■□□□□ 0.58
PTN-201ENST00000348225 GRIN3AQ8TCU5 1115 aa18.67■□□□□ 0.58
PTN-201ENST00000348225 ZNF473Q8WTR7 871 aaKnown RBP18.67■□□□□ 0.58
PTN-201ENST00000348225 FGF14Q92915 247 aa18.67■□□□□ 0.58
PTN-201ENST00000348225 NXPE3Q969Y0 559 aa18.67■□□□□ 0.58
PTN-201ENST00000348225 VOPP1Q96AW1 172 aa18.67■□□□□ 0.58
PTN-201ENST00000348225 SCRN2Q96FV2 425 aa18.67■□□□□ 0.58
PTN-201ENST00000348225 TRMT61BQ9BVS5 477 aaKnown RBP18.67■□□□□ 0.58
PTN-201ENST00000348225 TTYH1Q9H313 450 aaPredicted RBP18.67■□□□□ 0.58
PTN-201ENST00000348225 IL36AQ9UHA7 158 aa18.67■□□□□ 0.58
PTN-201ENST00000348225 BPTFQ12830 3046 aa18.66■□□□□ 0.58
PTN-201ENST00000348225 PRRT4C9JH25 899 aa18.66■□□□□ 0.58
PTN-201ENST00000348225 NEFHP12036 1026 aa18.66■□□□□ 0.58
PTN-201ENST00000348225 TAC1P20366 129 aa18.66■□□□□ 0.58
PTN-201ENST00000348225 FOXN2P32314 431 aa18.66■□□□□ 0.58
PTN-201ENST00000348225 RGS19P49795 217 aa18.66■□□□□ 0.58
PTN-201ENST00000348225 CSRP3P50461 194 aa18.66■□□□□ 0.58
PTN-201ENST00000348225 PTPRRQ15256 657 aa18.66■□□□□ 0.58
PTN-201ENST00000348225 ZKSCAN8Q15776 578 aaPredicted RBP18.66■□□□□ 0.58
PTN-201ENST00000348225 ITPRIPL2Q3MIP1 535 aa18.66■□□□□ 0.58
PTN-201ENST00000348225 CCDC153Q494R4 210 aa18.66■□□□□ 0.58
PTN-201ENST00000348225 FNDC3BQ53EP0 1204 aaKnown RBP18.66■□□□□ 0.58
PTN-201ENST00000348225 RNF187Q5TA31 235 aaPredicted RBP18.66■□□□□ 0.58
PTN-201ENST00000348225 N4BP2L1Q5TBK1 243 aaPredicted RBP18.66■□□□□ 0.58
PTN-201ENST00000348225 FAM45BPQ6NSW5 357 aa18.66■□□□□ 0.58
PTN-201ENST00000348225 TPRG1Q6ZUI0 275 aa18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms