RNA–Protein interactions for RNA: ENST00000347613.8

CLCN3-201, Transcript of chloride voltage-gated channel 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CLCN3, Length 3,635 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-201ENST00000347613 AKTIPQ9H8T0 292 aa6.05□□□□□ -1.44
CLCN3-201ENST00000347613 MEAF6Q9HAF1 191 aa6.05□□□□□ -1.44
CLCN3-201ENST00000347613 ARNT2Q9HBZ2 717 aa6.05□□□□□ -1.44
CLCN3-201ENST00000347613 RNF186Q9NXI6 227 aa6.05□□□□□ -1.44
CLCN3-201ENST00000347613 PSMD13Q9UNM6 376 aa6.05□□□□□ -1.44
CLCN3-201ENST00000347613 VWA7Q9Y334 891 aa6.05□□□□□ -1.44
CLCN3-201ENST00000347613 TIMM22Q9Y584 194 aa6.05□□□□□ -1.44
CLCN3-201ENST00000347613 SQORQ9Y6N5 450 aa6.05□□□□□ -1.44
CLCN3-201ENST00000347613 PDE4DIPQ5VU43 2346 aa6.05□□□□□ -1.44
CLCN3-201ENST00000347613 KPNA6O60684 536 aa6.05□□□□□ -1.44
CLCN3-201ENST00000347613 BCAS2O75934 225 aaPredicted RBP6.05□□□□□ -1.44
CLCN3-201ENST00000347613 GJB5O95377 273 aa6.05□□□□□ -1.44
CLCN3-201ENST00000347613 CD160O95971 181 aa6.05□□□□□ -1.44
CLCN3-201ENST00000347613 PRLP01236 227 aa6.05□□□□□ -1.44
CLCN3-201ENST00000347613 KLKB1P03952 638 aa6.05□□□□□ -1.44
CLCN3-201ENST00000347613 PSMC3P17980 439 aa6.05□□□□□ -1.44
CLCN3-201ENST00000347613 ATP6V1B2P21281 511 aa6.05□□□□□ -1.44
CLCN3-201ENST00000347613 GPX3P22352 226 aa6.05□□□□□ -1.44
CLCN3-201ENST00000347613 OXTRP30559 389 aa6.05□□□□□ -1.44
CLCN3-201ENST00000347613 OR1G1P47890 313 aa6.05□□□□□ -1.44
CLCN3-201ENST00000347613 SERPINH1P50454 418 aaKnown RBP6.05□□□□□ -1.44
CLCN3-201ENST00000347613 HK3P52790 923 aa6.05□□□□□ -1.44
CLCN3-201ENST00000347613 INHBCP55103 352 aa6.05□□□□□ -1.44
CLCN3-201ENST00000347613 ZXDBP98169 803 aa6.05□□□□□ -1.44
CLCN3-201ENST00000347613 DSC1Q08554 894 aa6.05□□□□□ -1.44
CLCN3-201ENST00000347613 TAF10Q12962 218 aa6.05□□□□□ -1.44
CLCN3-201ENST00000347613 VPS26BQ4G0F5 336 aa6.05□□□□□ -1.44
CLCN3-201ENST00000347613 MTX3Q5HYI7 312 aa6.05□□□□□ -1.44
CLCN3-201ENST00000347613 RTP2Q5QGT7 225 aa6.05□□□□□ -1.44
CLCN3-201ENST00000347613 POTEHQ6S545 545 aa6.05□□□□□ -1.44
CLCN3-201ENST00000347613 PDZD4Q76G19 769 aaPredicted RBP6.05□□□□□ -1.44
CLCN3-201ENST00000347613 PIANPQ8IYJ0 282 aa6.05□□□□□ -1.44
CLCN3-201ENST00000347613 PGAM4Q8N0Y7 254 aa6.05□□□□□ -1.44
CLCN3-201ENST00000347613 UMODL1-AS1Q8N2C9 162 aa6.05□□□□□ -1.44
CLCN3-201ENST00000347613 TEX26Q8N6G2 289 aa6.05□□□□□ -1.44
CLCN3-201ENST00000347613 OR2T11Q8NH01 316 aa6.05□□□□□ -1.44
CLCN3-201ENST00000347613 BLOC1S5Q8TDH9 187 aa6.05□□□□□ -1.44
CLCN3-201ENST00000347613 LPGAT1Q92604 370 aa6.05□□□□□ -1.44
CLCN3-201ENST00000347613 HBEGFQ99075 208 aa6.05□□□□□ -1.44
CLCN3-201ENST00000347613 SEMA3CQ99985 751 aa6.05□□□□□ -1.44
CLCN3-201ENST00000347613 MRPL57Q9BQC6 102 aaKnown RBP6.05□□□□□ -1.44
CLCN3-201ENST00000347613 TDRD1Q9BXT4 1180 aaKnown RBP6.05□□□□□ -1.44
CLCN3-201ENST00000347613 SLC25A51Q9H1U9 297 aa6.05□□□□□ -1.44
CLCN3-201ENST00000347613 LIN28AQ9H9Z2 209 aaKnown RBP6.05□□□□□ -1.44
CLCN3-201ENST00000347613 PDFQ9HBH1 243 aa6.05□□□□□ -1.44
CLCN3-201ENST00000347613 TBC1D13Q9NVG8 400 aa6.05□□□□□ -1.44
CLCN3-201ENST00000347613 TSR3Q9UJK0 312 aaKnown RBP6.05□□□□□ -1.44
CLCN3-201ENST00000347613 FAM50BQ9Y247 325 aa6.05□□□□□ -1.44
CLCN3-201ENST00000347613 ANKRD6Q9Y2G4 727 aa6.05□□□□□ -1.44
CLCN3-201ENST00000347613 IGLV3-10A0A075B6K4 115 aa6.05□□□□□ -1.44
CLCN3-201ENST00000347613 PDLIM1O00151 329 aa6.05□□□□□ -1.44
CLCN3-201ENST00000347613 FXYD1O00168 92 aa6.05□□□□□ -1.44
CLCN3-201ENST00000347613 CDC7O00311 574 aa6.05□□□□□ -1.44
CLCN3-201ENST00000347613 NME4O00746 187 aa6.05□□□□□ -1.44
CLCN3-201ENST00000347613 SOCS2O14508 198 aa6.05□□□□□ -1.44
CLCN3-201ENST00000347613 TADA2AO75478 443 aa6.05□□□□□ -1.44
CLCN3-201ENST00000347613 CLIC3O95833 236 aa6.05□□□□□ -1.44
CLCN3-201ENST00000347613 FAM163BP0C2L3 166 aa6.05□□□□□ -1.44
CLCN3-201ENST00000347613 ATP6V1B1P15313 513 aa6.05□□□□□ -1.44
CLCN3-201ENST00000347613 ATF6P18850 670 aa6.05□□□□□ -1.44
CLCN3-201ENST00000347613 DNAJB2P25686 324 aa6.05□□□□□ -1.44
CLCN3-201ENST00000347613 RGS2P41220 211 aa6.05□□□□□ -1.44
CLCN3-201ENST00000347613 PSME3P61289 254 aa6.05□□□□□ -1.44
CLCN3-201ENST00000347613 SATB1Q01826 763 aa6.05□□□□□ -1.44
CLCN3-201ENST00000347613 PRPSAP1Q14558 356 aa6.05□□□□□ -1.44
CLCN3-201ENST00000347613 MYLK3Q32MK0 819 aa6.05□□□□□ -1.44
CLCN3-201ENST00000347613 PUS10Q3MIT2 529 aaKnown RBP6.05□□□□□ -1.44
CLCN3-201ENST00000347613 VARS2Q5ST30 1063 aaKnown RBP6.05□□□□□ -1.44
CLCN3-201ENST00000347613 CWF19L1Q69YN2 538 aaKnown RBP6.05□□□□□ -1.44
CLCN3-201ENST00000347613 LINC00523Q86TU6 105 aa6.05□□□□□ -1.44
CLCN3-201ENST00000347613 SAPCD2Q86UD0 394 aa6.05□□□□□ -1.44
CLCN3-201ENST00000347613 NMD3Q96D46 503 aaKnown RBP6.05□□□□□ -1.44
CLCN3-201ENST00000347613 CDK15Q96Q40 435 aa6.05□□□□□ -1.44
CLCN3-201ENST00000347613 ACOX2Q99424 681 aa6.05□□□□□ -1.44
CLCN3-201ENST00000347613 SLC2A11Q9BYW1 496 aa6.05□□□□□ -1.44
CLCN3-201ENST00000347613 SOX17Q9H6I2 414 aaPredicted RBP6.05□□□□□ -1.44
CLCN3-201ENST00000347613 BPIFA1Q9NP55 256 aa6.05□□□□□ -1.44
CLCN3-201ENST00000347613 LTB4R2Q9NPC1 389 aa6.05□□□□□ -1.44
CLCN3-201ENST00000347613 ENTPD7Q9NQZ7 604 aa6.05□□□□□ -1.44
CLCN3-201ENST00000347613 GKN1Q9NS71 199 aa6.05□□□□□ -1.44
CLCN3-201ENST00000347613 DUS2Q9NX74 493 aaKnown RBP6.05□□□□□ -1.44
CLCN3-201ENST00000347613 ADA2Q9NZK5 511 aa6.05□□□□□ -1.44
CLCN3-201ENST00000347613 CAMSAP3Q9P1Y5 1249 aaPredicted RBP6.05□□□□□ -1.44
CLCN3-201ENST00000347613 EGFL7Q9UHF1 273 aa6.05□□□□□ -1.44
CLCN3-201ENST00000347613 TLR6Q9Y2C9 796 aa6.05□□□□□ -1.44
CLCN3-201ENST00000347613 Q9Y3F1 56 aa6.05□□□□□ -1.44
CLCN3-201ENST00000347613 DTNAQ9Y4J8 743 aa6.05□□□□□ -1.44
CLCN3-201ENST00000347613 TRAF6Q9Y4K3 522 aa6.05□□□□□ -1.44
CLCN3-201ENST00000347613 AP4B1Q9Y6B7 739 aa6.05□□□□□ -1.44
CLCN3-201ENST00000347613 NCF1BA6NI72 391 aaPredicted RBP6.04□□□□□ -1.44
CLCN3-201ENST00000347613 NCF1CA8MVU1 366 aaPredicted RBP6.04□□□□□ -1.44
CLCN3-201ENST00000347613 H3BNC9 293 aa6.04□□□□□ -1.44
CLCN3-201ENST00000347613 GPR182O15218 404 aa6.04□□□□□ -1.44
CLCN3-201ENST00000347613 SUPT7LO94864 414 aa6.04□□□□□ -1.44
CLCN3-201ENST00000347613 ATP5BP06576 529 aaKnown RBP6.04□□□□□ -1.44
CLCN3-201ENST00000347613 LINC00032P0C843 101 aa6.04□□□□□ -1.44
CLCN3-201ENST00000347613 HSPA1AP0DMV8 641 aaKnown RBP6.04□□□□□ -1.44
CLCN3-201ENST00000347613 HSPA1BP0DMV9 641 aaKnown RBP6.04□□□□□ -1.44
CLCN3-201ENST00000347613 CKBP12277 381 aa6.04□□□□□ -1.44
CLCN3-201ENST00000347613 NCF1P14598 390 aaPredicted RBP6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms