RNA–Protein interactions for RNA: ENST00000344726.9

HMGN3-202, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN3, Length 872 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-202ENST00000344726 HSD11B1LQ7Z5J1 315 aa14.45□□□□□ -0.1
HMGN3-202ENST00000344726 RHOT1Q8IXI2 618 aa14.45□□□□□ -0.1
HMGN3-202ENST00000344726 CCDC13Q8IYE1 715 aa14.45□□□□□ -0.1
HMGN3-202ENST00000344726 CACTIN-AS1Q8N1I8 211 aa14.45□□□□□ -0.1
HMGN3-202ENST00000344726 IFI44Q8TCB0 444 aa14.45□□□□□ -0.1
HMGN3-202ENST00000344726 HNRNPLLQ8WVV9 542 aaKnown RBP14.45□□□□□ -0.1
HMGN3-202ENST00000344726 NXPE2Q96DL1 559 aa14.45□□□□□ -0.1
HMGN3-202ENST00000344726 SCRN2Q96FV2 425 aa14.45□□□□□ -0.1
HMGN3-202ENST00000344726 PDXPQ96GD0 296 aa14.45□□□□□ -0.1
HMGN3-202ENST00000344726 CRELD1Q96HD1 420 aa14.45□□□□□ -0.1
HMGN3-202ENST00000344726 TBATAQ96M53 351 aa14.45□□□□□ -0.1
HMGN3-202ENST00000344726 SMG1Q96Q15 3661 aaKnown RBP14.45□□□□□ -0.1
HMGN3-202ENST00000344726 DUSP23Q9BVJ7 150 aa14.45□□□□□ -0.1
HMGN3-202ENST00000344726 BOCQ9BWV1 1114 aa14.45□□□□□ -0.1
HMGN3-202ENST00000344726 LGR4Q9BXB1 951 aa14.45□□□□□ -0.1
HMGN3-202ENST00000344726 OCEL1Q9H607 264 aa14.45□□□□□ -0.1
HMGN3-202ENST00000344726 SPASTQ9UBP0 616 aa14.45□□□□□ -0.1
HMGN3-202ENST00000344726 SALL4Q9UJQ4 1053 aa14.45□□□□□ -0.1
HMGN3-202ENST00000344726 TTLL3Q9Y4R7 772 aa14.45□□□□□ -0.1
HMGN3-202ENST00000344726 PCDHA13Q9Y5I0 950 aa14.45□□□□□ -0.1
HMGN3-202ENST00000344726 HEY1Q9Y5J3 304 aa14.45□□□□□ -0.1
HMGN3-202ENST00000344726 ALG6Q9Y672 507 aa14.45□□□□□ -0.1
HMGN3-202ENST00000344726 RCCD1A6NED2 376 aa14.44□□□□□ -0.1
HMGN3-202ENST00000344726 TMEM202A6NGA9 273 aa14.44□□□□□ -0.1
HMGN3-202ENST00000344726 YY2O15391 372 aa14.44□□□□□ -0.1
HMGN3-202ENST00000344726 SPOPO43791 374 aa14.44□□□□□ -0.1
HMGN3-202ENST00000344726 PRLP01236 227 aa14.44□□□□□ -0.1
HMGN3-202ENST00000344726 JCHAINP01591 159 aa14.44□□□□□ -0.1
HMGN3-202ENST00000344726 GP1BAP07359 652 aa14.44□□□□□ -0.1
HMGN3-202ENST00000344726 MMP2P08253 660 aa14.44□□□□□ -0.1
HMGN3-202ENST00000344726 TGM2P21980 687 aa14.44□□□□□ -0.1
HMGN3-202ENST00000344726 TRIM23P36406 574 aa14.44□□□□□ -0.1
HMGN3-202ENST00000344726 ETV3P41162 512 aa14.44□□□□□ -0.1
HMGN3-202ENST00000344726 NOP2P46087 812 aaKnown RBP14.44□□□□□ -0.1
HMGN3-202ENST00000344726 HK3P52790 923 aa14.44□□□□□ -0.1
HMGN3-202ENST00000344726 E2F1Q01094 437 aa14.44□□□□□ -0.1
HMGN3-202ENST00000344726 TAZQ16635 292 aa14.44□□□□□ -0.1
HMGN3-202ENST00000344726 C6orf132Q5T0Z8 1188 aa14.44□□□□□ -0.1
HMGN3-202ENST00000344726 ESRP1Q6NXG1 681 aaKnown RBP14.44□□□□□ -0.1
HMGN3-202ENST00000344726 CRTC1Q6UUV9 634 aa14.44□□□□□ -0.1
HMGN3-202ENST00000344726 RFLNAQ6ZTI6 216 aa14.44□□□□□ -0.1
HMGN3-202ENST00000344726 B4GALNT4Q76KP1 1039 aa14.44□□□□□ -0.1
HMGN3-202ENST00000344726 HID1Q8IV36 788 aa14.44□□□□□ -0.1
HMGN3-202ENST00000344726 SLC35F3Q8IY50 421 aa14.44□□□□□ -0.1
HMGN3-202ENST00000344726 CCDC170Q8IYT3 715 aa14.44□□□□□ -0.1
HMGN3-202ENST00000344726 CNTD1Q8N815 330 aa14.44□□□□□ -0.1
HMGN3-202ENST00000344726 CCNYQ8ND76 341 aa14.44□□□□□ -0.1
HMGN3-202ENST00000344726 TPCN2Q8NHX9 752 aa14.44□□□□□ -0.1
HMGN3-202ENST00000344726 OR1E3Q8WZA6 343 aa14.44□□□□□ -0.1
HMGN3-202ENST00000344726 NUS1Q96E22 293 aa14.44□□□□□ -0.1
HMGN3-202ENST00000344726 DTD2Q96FN9 168 aa14.44□□□□□ -0.1
HMGN3-202ENST00000344726 WDR92Q96MX6 357 aa14.44□□□□□ -0.1
HMGN3-202ENST00000344726 OLFM3Q96PB7 478 aa14.44□□□□□ -0.1
HMGN3-202ENST00000344726 PANX2Q96RD6 677 aa14.44□□□□□ -0.1
HMGN3-202ENST00000344726 IL12RB2Q99665 862 aa14.44□□□□□ -0.1
HMGN3-202ENST00000344726 TDRD1Q9BXT4 1180 aaKnown RBP14.44□□□□□ -0.1
HMGN3-202ENST00000344726 SLC13A1Q9BZW2 595 aa14.44□□□□□ -0.1
HMGN3-202ENST00000344726 NRSN2Q9GZP1 204 aa14.44□□□□□ -0.1
HMGN3-202ENST00000344726 FGF22Q9HCT0 170 aa14.44□□□□□ -0.1
HMGN3-202ENST00000344726 AMACRQ9UHK6 382 aa14.44□□□□□ -0.1
HMGN3-202ENST00000344726 CHKBQ9Y259 395 aa14.44□□□□□ -0.1
HMGN3-202ENST00000344726 BPTFQ12830 3046 aa14.43□□□□□ -0.1
HMGN3-202ENST00000344726 A0A0J9YYE9 177 aa14.43□□□□□ -0.1
HMGN3-202ENST00000344726 A0A1W2PNU3 283 aaPredicted RBP14.43□□□□□ -0.1
HMGN3-202ENST00000344726 CPED1A4D0V7 1026 aa14.43□□□□□ -0.1
HMGN3-202ENST00000344726 EME2A4GXA9 379 aaPredicted RBP14.43□□□□□ -0.1
HMGN3-202ENST00000344726 LMO7DNF2Z398 122 aa14.43□□□□□ -0.1
HMGN3-202ENST00000344726 TPP1O14773 563 aa14.43□□□□□ -0.1
HMGN3-202ENST00000344726 APOL1O14791 398 aa14.43□□□□□ -0.1
HMGN3-202ENST00000344726 TRBC1P01850 177 aa14.43□□□□□ -0.1
HMGN3-202ENST00000344726 CYP2A6P11509 494 aaPredicted RBP14.43□□□□□ -0.1
HMGN3-202ENST00000344726 CDKN2BP42772 138 aa14.43□□□□□ -0.1
HMGN3-202ENST00000344726 MARCKSL1P49006 195 aa14.43□□□□□ -0.1
HMGN3-202ENST00000344726 KIAA1024LP59773 190 aa14.43□□□□□ -0.1
HMGN3-202ENST00000344726 SRP54P61011 504 aaKnown RBP14.43□□□□□ -0.1
HMGN3-202ENST00000344726 DYNLT1P63172 113 aa14.43□□□□□ -0.1
HMGN3-202ENST00000344726 ADCY2Q08462 1091 aa14.43□□□□□ -0.1
HMGN3-202ENST00000344726 LLGL1Q15334 1064 aa14.43□□□□□ -0.1
HMGN3-202ENST00000344726 PNCKQ6P2M8 343 aa14.43□□□□□ -0.1
HMGN3-202ENST00000344726 Q6ZVL8 140 aa14.43□□□□□ -0.1
HMGN3-202ENST00000344726 EFL1Q7Z2Z2 1120 aaKnown RBP14.43□□□□□ -0.1
HMGN3-202ENST00000344726 RD3Q7Z3Z2 195 aa14.43□□□□□ -0.1
HMGN3-202ENST00000344726 RFX6Q8HWS3 928 aa14.43□□□□□ -0.1
HMGN3-202ENST00000344726 SFTPA2Q8IWL1 248 aa14.43□□□□□ -0.1
HMGN3-202ENST00000344726 EFCAB3Q8N7B9 438 aa14.43□□□□□ -0.1
HMGN3-202ENST00000344726 TRAF3IP1Q8TDR0 691 aaPredicted RBP14.43□□□□□ -0.1
HMGN3-202ENST00000344726 CEP41Q9BYV8 373 aa14.43□□□□□ -0.1
HMGN3-202ENST00000344726 USP29Q9HBJ7 922 aa14.43□□□□□ -0.1
HMGN3-202ENST00000344726 MRPL40Q9NQ50 206 aaKnown RBP14.43□□□□□ -0.1
HMGN3-202ENST00000344726 DDX56Q9NY93 547 aaKnown RBP14.43□□□□□ -0.1
HMGN3-202ENST00000344726 SAE1Q9UBE0 346 aaPredicted RBP14.43□□□□□ -0.1
HMGN3-202ENST00000344726 KLQ9UEF7 1012 aa14.43□□□□□ -0.1
HMGN3-202ENST00000344726 REXO2Q9Y3B8 237 aaKnown RBP14.43□□□□□ -0.1
HMGN3-202ENST00000344726 EPN1Q9Y6I3 576 aaPredicted RBP14.43□□□□□ -0.1
HMGN3-202ENST00000344726 SCN8AQ9UQD0 1980 aa14.43□□□□□ -0.1
HMGN3-202ENST00000344726 IGSF10Q6WRI0 2623 aa14.42□□□□□ -0.1
HMGN3-202ENST00000344726 A0A087WV48 116 aa14.42□□□□□ -0.1
HMGN3-202ENST00000344726 A0A0A6YYK5 440 aaPredicted RBP14.42□□□□□ -0.1
HMGN3-202ENST00000344726 PSTPIP1O43586 416 aa14.42□□□□□ -0.1
HMGN3-202ENST00000344726 BRINP1O60477 761 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms